Showing: fastqreset
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19
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6
answers
2.5k
views
13 follow
6
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Parse Fastq File - Pad Reads With N'S
fastq parsing written 5.1 years ago by Steffi510 • updated 1 day ago by infenit10110
4
votes
2
answers
80
views
2
answers
dedupe from BBMAP suite woes with memory and stdout
duplicates fastq bbmap dedupe linux written 2 days ago by ALchEmiXt1.7k • updated 2 days ago by Brian Bushnell9.8k
118
votes
8
answers
38k
views
106 follow
8
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Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 2.5 years ago by Obi Griffith14k • updated 8 days ago by al-ash0
3
votes
1
answer
88
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1
answer
how to split/cut/restrict DNA strand
fasta manipulation fastq python R written 9 days ago by Roman Lu┼ítrik50 • updated 9 days ago by shenwei3561.6k
13
votes
2
answers
139
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5 follow
2
answers
Forum: Modernising the FASTQ Format
fasta fastq forum efficiency written 9 days ago by dario.garvan330 • updated 9 days ago by d-cameron310
5
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1
answer
334
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1
answer
1
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2
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364
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2
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Match read length and quality string length
fastq rna-seq sequencing written 8 months ago by Jason20 • updated 11 days ago by Biostar ♦♦ 10
17
votes
3
answers
2.4k
views
5 follow
3
answers
Aligning paired end fastq files dumped from SRA
sra fastq bwa mem paired written 2.3 years ago by Zev.Kronenberg10k • updated 17 days ago by Christian2.4k
17
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4
answers
407
views
5 follow
4
answers
10
votes
4
answers
1.7k
views
4
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Extract specific reads from FASTQ files based on subsequence
fastq awk bash written 22 months ago by Paul490 • updated 20 days ago by springpython0
45
votes
6
answers
27k
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13 follow
6
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Converting Bam To Fastq
next-gen fastq format tool sequencing written 6.9 years ago by Zach Stednick590 • updated 27 days ago by Biostar ♦♦ 10
2
votes
1
answer
137
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1
answer
11
votes
4
answers
7.1k
views
7 follow
4
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How Can I Find Out Unknown Illumina Barcode.
reads illumina fastq hiseq written 3.1 years ago by samsara480 • updated 28 days ago by elgart0
4
votes
1
answer
144
views
1
answer
Fastx_toolkit with nanopore data
fasta fastq fastx nanopore written 29 days ago by glgowers10 • updated 29 days ago by Botond Sipos1.5k
7
votes
2
answers
1.8k
views
5 follow
2
answers
Nextera Transposon Contamination
fastq nextera written 2.3 years ago by Daniel E Cook130 • updated 4 weeks ago by agata88440
4
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3
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1.7k
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3
answers
1
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1
answer
147
views
1
answer
5
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2
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160
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2
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How can I tell my fastq is a fastqsanger or not?
fastq fastqsanger written 5 weeks ago by diltsjeri390 • updated 5 weeks ago by genomax222k
6
votes
1
answer
3.0k
views
6 follow
1
answer
Removing PCR duplicates from .fastq without .bam alignment
illumina fastq pcr duplicates written 2.2 years ago by Adrian Pelin1.9k • updated 5 weeks ago by Brian Bushnell9.8k
0
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1
answer
165
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1
answer
0
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0
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140
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0
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16
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3
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345
views
8 follow
3
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Update third line in fastq file using Biopython
fastq written 7 weeks ago by spaladug10 • updated 7 weeks ago by Alex Reynolds17k
1
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0
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250
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0
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10
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0
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171
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9 follow
0
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2
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3
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365
views
5 follow
3
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1
vote
1
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164
views
1
answer
How do you find the sequence of a specific gene?
genome fastq rna-seq written 9 weeks ago by anas.mansouri100 • updated 9 weeks ago by mastal5111.4k
0
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0
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175
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0
answers
1
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1
answer
187
views
1
answer
3
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3
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331
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3
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Trimming TruSeq Universal Adapter (Trimmomatic)
trimmomatic fastq trimming rna-seq written 10 weeks ago by ZheFrench20 • updated 10 weeks ago by mastal5111.4k
2
votes
1
answer
268
views
1
answer
fastq file error
fastq sortmerna rna-seq fastqc written 10 weeks ago by Pals1.3k
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