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Showing: fastq • reset
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<prev • 605 results • page 1 of 21 • next >
0
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2
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75
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5 follow
2
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Merging two fastq.gz files
merging fastq written 12 hours ago by tcf.hcdg • 50 • updated 10 hours ago by igor • 5.7k
1
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0
answers
90
views
0
answers
fastq Files processing
fasta fastqfiles dna-seq fastq written 3 days ago by emadelhewihy • 0
0
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0
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81
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0
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Mapping with Fasta vs fastq
fasta bowtie1 command fastq mapping written 3 days ago by jaqx008 • 10 • updated 3 days ago by genomax ♦ 46k
5
votes
1
answer
167
views
1
answer
10X scRNA-seq sample sheet generation issue
10x fastq sequencing bcl written 19 days ago by nikitavlassenko • 0 • updated 8 days ago by genomax ♦ 46k
1
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0
answers
66
views
0
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AB1 to FASTQ
fastq ab1 conversion written 8 days ago by deepak.k.choubey • 10
1
vote
3
answers
874
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3
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Match read length and quality string length
fastq rna-seq sequencing written 22 months ago by Jason • 20 • updated 9 days ago by peterhuang1108 • 0
1
vote
1
answer
69
views
1
answer
How to process ABI SOLID4 fastq
fastq abi solid4 written 12 days ago by Zhixue • 0 • updated 12 days ago by h.mon ♦ 13k
4
votes
2
answers
172
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2
answers
bcl2fastq: Could not parse the CSV stream text
fastq sequencing bcl written 18 days ago by nikitavlassenko • 0 • updated 15 days ago by swbarnes2 ♦ 3.4k
4
votes
1
answer
8.7k
views
1
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Issue With Sra To Fastq Conversion
sra fastq written 5.9 years ago by Arpssss • 40 • updated 18 days ago by Biostar ♦♦ 20
0
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0
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160
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0
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Filter low quality tiles from fastq files downloaded from SRA
quality filtering fastq sra written 10 weeks ago by dolevrahat • 10 • updated 28 days ago by Biostar ♦♦ 20
1
vote
1
answer
139
views
1
answer
Adjusting for uneven Nextseq loading
nextseq fastq chip-seq sequencing written 29 days ago by rbronste • 160 • updated 29 days ago by colindaven • 600
0
votes
1
answer
75
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1
answer
Bowtie alignment using RY format as reference
fastq alignment bowtie written 29 days ago by nalini1507 • 10 • updated 29 days ago by Pierre Lindenbaum ♦ 106k
2
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0
answers
117
views
0
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I would like to compare my RNA seq file together to find overlap?
genome fastq bam rna-seq sequencing written 5 weeks ago by star • 50
2
votes
1
answer
183
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1
answer
The orientation of Pacbio read.
tgs fastq longread pacbio written 5 weeks ago by 934963534 • 10 • updated 5 weeks ago by h.mon ♦ 13k
5
votes
1
answer
130
views
1
answer
Extracting longest read from fastq file
fastq written 5 weeks ago by KVC_bioinfo • 310 • updated 5 weeks ago by Pierre Lindenbaum ♦ 106k
3
votes
1
answer
136
views
1
answer
fastq to fasta conversion
fasta fastq go written 5 weeks ago by monicasteffi • 0 • updated 5 weeks ago by Vijay Lakhujani • 1.9k
10
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1
answer
2.9k
views
1
answer
Two Fastq Files And Alignment With Bwa.
fastq alignment sam bwa written 6.4 years ago by KCC • 3.8k • updated 6 weeks ago by Biostar ♦♦ 20
5
votes
1
answer
192
views
1
answer
Sorting my .bam with samtools produces differences in the fastq files generated afterwards
fastq next-gen samtools bam sort written 6 weeks ago by guillepalou4 • 0 • updated 6 weeks ago by Devon Ryan ♦ 78k
2
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1
answer
217
views
1
answer
fastq quality scores
fastq written 6 weeks ago by nukkduko • 0 • updated 6 weeks ago by Pierre Lindenbaum ♦ 106k
3
votes
0
answers
213
views
0
answers
Cluster position units in fastq file
fastq rna-seq written 6 weeks ago by rbierman • 30
2
votes
3
answers
205
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6 follow
3
answers
Fastq and sam number of reads
ngs fastq sam written 7 weeks ago by ceboral • 0 • updated 7 weeks ago by swbarnes2 ♦ 3.4k
2
votes
1
answer
161
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1
answer
merging fastq, sam or bam?
fastq bam sam written 7 weeks ago by ceboral • 0 • updated 7 weeks ago by ATpoint • 3.5k
8
votes
4
answers
266
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6 follow
4
answers
[Python] reads from fastq file
python fastq written 8 weeks ago by thebioinfo • 0 • updated 8 weeks ago by Buffo • 1.1k
23
votes
3
answers
5.3k
views
12 follow
3
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Is There A Faster Replacement For Fastq-Dump (From The Sra-Toolkit)?
sra fastq written 4.2 years ago by Devon Ryan ♦ 78k • updated 8 weeks ago by ATpoint • 3.5k
8
votes
1
answer
238
views
1
answer
How can I demultiplex two Library preps(Single Index and Dual Index) using bcl2fastq.
fastq sequencing bcl written 10 weeks ago by moranr • 240 • updated 10 weeks ago by genomax ♦ 46k
7
votes
7
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11k
views
7 follow
7
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How to count fastq reads
reads sequence fastq next-gen written 3.0 years ago by Chenglin • 90 • updated 10 weeks ago by sacha • 1.1k
0
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0
answers
167
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0
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map fasts files
R fastq rna-seq written 10 weeks ago by Learner • 90
2
votes
1
answer
249
views
1
answer
How do I extract aligned reads from BAM file?
fastq bam written 10 weeks ago by MAPK • 1.2k • updated 10 weeks ago by Devon Ryan ♦ 78k
5
votes
1
answer
280
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1
answer
determine what best alignment tool when using R on fastq files?
R fastq alignment rna-seq written 10 weeks ago by emadelhewihy • 0 • updated 10 weeks ago by mastal511 • 1.8k
0
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0
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189
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0
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How to identify library name in fastq filename
gatk fastq library name beginner read group written 10 weeks ago by zmk • 0
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