Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: fastq • reset
or   Classic search
<prev • 663 results • page 1 of 23 • next >
3
votes
3
answers
148
views
6 follow
3
answers
add UMI sequences to fastq read name
illumina umi fastq written 6 days ago by User6891 • 240 • updated 10 hours ago by i.sudbery ♦ 3.0k
7
votes
1
answer
183
views
5 follow
1
answer
BBDuk.sh and BBDuk2.sh barcodefilter does not filter the reads
barcode fastq bbduk bbmap illumina index written 4 weeks ago by chilifan • 0
13
votes
5
answers
5.0k
views
6 follow
5
answers
How To Convert Fastq/Sff To Fasta With Quality Cut Off
fasta fastq written 7.8 years ago by toshnam • 620 • updated 2 days ago by msimmer92 • 50
0
votes
1
answer
82
views
1
answer
'Reverse' quality trimming
fastq quality control sequencing written 13 days ago by SV13 • 0 • updated 13 days ago by genomax ♦ 60k
4
votes
1
answer
163
views
5 follow
1
answer
losing reads bam to fastq
fixmate fastq bam whole genome sequencing written 15 days ago by soleimani_homa • 0 • updated 15 days ago by finswimmer ♦ 8.8k
4
votes
0
answers
198
views
0
answers
Duplicate/identical reads in fastq file
fastq sequencing written 18 days ago by cpad0112 ♦ 10k
5
votes
0
answers
200
views
5 follow
0
answers
Merging fastq files
illumina fastq miseq merge rna-seq written 12 weeks ago by william.mcentegart • 0 • updated 19 days ago by Biostar ♦♦ 20
24
votes
5
answers
1.1k
views
11 follow
5
answers
Forum: Why not merging?
fastq forum sequencing written 18 months ago by finswimmer ♦ 8.8k
1
vote
1
answer
118
views
1
answer
Filtering fastq vs BAM for fragment size range
bowtie2 fastq alignment bam written 28 days ago by rbronste • 230
7
votes
1
answer
263
views
6 follow
1
answer
Split fastq according to barcodes
scrna-seq fastq demultiplexing written 4 weeks ago by Hughie • 10 • updated 4 weeks ago by finswimmer ♦ 8.8k
0
votes
0
answers
160
views
0
answers
Amplicon Sequencing samples identification
data amplicon fastq sequencing written 4 weeks ago by bwczech • 40
183
votes
9
answers
76k
views
162 follow
9
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 4.4 years ago by Obi Griffith ♦ 17k • updated 4 weeks ago by Renesh • 1.5k
1
vote
1
answer
115
views
1
answer
problem wit unzipping fastq.gz file
illumina fastq rna-seq fastq.gz written 4 weeks ago by yff • 0 • updated 4 weeks ago by JY Nam • 20
0
votes
1
answer
165
views
5 follow
1
answer
Extracting the full read ID when converting from BAM -> FASTQ
fastq bam samtools bwa written 5 weeks ago by ttmigueltt • 0 • updated 5 weeks ago by toralmanvar • 730
10
votes
1
answer
244
views
6 follow
1
answer
STAR alignment error: ERROR in input reads
fastq star rna-seq written 5 weeks ago by prabin.dm • 30
20
votes
1
answer
412
views
7 follow
1
answer
How to work with 2.6 TB genome data which is deposited in the server?
exome fastq sequencing written 6 months ago by greyman • 80 • updated 7 weeks ago by Biostar ♦♦ 20
18
votes
0
answers
1.5k
views
16 follow
0
answers
Tutorial: Fast download of FASTQ files and metadata from the European Nucleotide Archive (ENA)
fastq ena fastq-dump tutorial aspera written 6 months ago by ATpoint ♦ 12k
4
votes
2
answers
159
views
2
answers
convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to_fasta
fasta fastq fastx emboss conversion written 8 weeks ago by marongiu.luigi • 350 • updated 8 weeks ago by finswimmer ♦ 8.8k
6
votes
1
answer
736
views
6 follow
1
answer
Merge FastQ Files
fastq rna-seq written 13 months ago by shounak.chakraborty1990 • 0 • updated 8 weeks ago by Biostar ♦♦ 20
5
votes
1
answer
229
views
5 follow
1
answer
Split a sequence in a fastq file
sequence fastq next-gen sequencing written 8 weeks ago by ste.lu • 40 • updated 8 weeks ago by Pierre Lindenbaum ♦ 116k
1
vote
0
answers
105
views
0
answers
Why are file names deleted during submission of RNA-seq data to ENA, after disabling editor mode.
fastq rna-seq ena written 9 weeks ago by caggtaagtat • 390
0
votes
1
answer
639
views
1
answer
bioawk output in original fastq format
fastq bioawk written 17 months ago by weixiaokuan • 90 • updated 10 weeks ago by Stephane Plaisance • 380
1
vote
1
answer
1.3k
views
1
answer
What does yield refer to in demultiplexing statistics
rnaseq ngs fastq yeild demultiplexing written 3.2 years ago by bioinforesearchquestions • 190 • updated 10 weeks ago by astropan • 0
3
votes
1
answer
203
views
1
answer
Filter a large fasta or fastq by a query sequence, with parameterized fuzzy matching
fasta fastq filtering written 10 weeks ago by ovon • 20 • updated 10 weeks ago by finswimmer ♦ 8.8k
4
votes
1
answer
201
views
1
answer
Converting mapped + unmapped BAM files to raw FASTQ (RNA-seq data)
bam2fastq bam fastq conversion rna-seq written 11 weeks ago by rodd • 20 • updated 11 weeks ago by swbarnes2 ♦ 4.7k
0
votes
1
answer
152
views
1
answer
BAM file doesn't show the altered sample identifier
fastq bam written 11 weeks ago by Badh2 • 0 • updated 11 weeks ago by finswimmer ♦ 8.8k
0
votes
0
answers
218
views
0
answers
Split oxford nanopore MinION fastq file based on barcode
barcode fastq minion oxford nanopore minion split written 12 weeks ago by ambi1999 • 30 • updated 12 weeks ago by WouterDeCoster ♦ 35k
3
votes
1
answer
251
views
1
answer
De-duplicate UMI at FASTQ level
umi fastq written 12 weeks ago by jomo018 • 460 • updated 12 weeks ago by i.sudbery ♦ 3.0k
1
vote
3
answers
3.6k
views
8 follow
3
answers
Extracting Read Pairs From Region So That All Pairs Remain Intact
fastq picard samtools bam written 5.3 years ago by Davy • 360 • updated 3 months ago by cmdcolin • 1.0k
6
votes
2
answers
161
views
2
answers
Sequenced sample twice, can I merge the fastqs to analyze?
rnaseq fastq written 3 months ago by Pin.Bioinf • 200 • updated 3 months ago by geek_y ♦ 8.8k
<prev • 663 results • page 1 of 23 • next >
Recent Votes
Recent Locations • All »
  • Thailand, 3 minutes ago
  • Brazil, 6 minutes ago
  • State College, PA, Penn State, 7 minutes ago
  • United Kingdom, 8 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1253 users visited in the last hour