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<prev • 692 results • page 1 of 24 • next >
0
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67
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1
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working with Sanger fasta + qual + clip files
sanger trimming fastq written 5 days ago by sullis02 • 0 • updated 5 days ago by JC ♦ 7.6k
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1
answer
53
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1
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Running 3 FASTQ files for WGBS
fastq methylation wgbs written 6 days ago by Batu • 110
3
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1
answer
174
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1
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How can I split WES FASTQ file into sub-files for each chromosome ?
fastq wes split chromosome written 11 days ago by 948077241 • 0
7
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1
answer
105
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1
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SRA from NCBI?
ncbi sra fastq rna-seq written 11 days ago by star • 130
2
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1
answer
108
views
1
answer
Can't run fastqc in cmd windows
fastq windows written 13 days ago by anasofiamoreira94 • 30
1
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0
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410
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0
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PSMC: fq2psmc conversion problems
psmcfa psmc fastq conversion written 6 months ago by miles.thorburn • 80 • updated 14 days ago by h.mon ♦ 24k
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0
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116
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search multiple sequences in multiple fastqs
fastq sequencing written 14 days ago by max_19 • 30
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4
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101
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6 follow
4
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How to access specifically 30x NA12878 sequencing runs
wgs giab data-access fastq benchmark written 17 days ago by Fungsten • 0 • updated 17 days ago by Pierre Lindenbaum ♦ 118k
0
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1
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90
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1
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fastq reads cleaning
reads fastq cleaning written 18 days ago by blueskypie • 30
7
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2
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115
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6 follow
2
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Simple FASTQ/A manipulation... how to add a single adapter sequence to 5' of all reads?
fasta fastq written 19 days ago by quickquark • 0
1
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1
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1.4k
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1
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What does yield refer to in demultiplexing statistics
rnaseq ngs fastq yeild demultiplexing written 3.4 years ago by bioinforesearchquestions • 200 • updated 21 days ago by bmahesh07 • 0
8
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2
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186
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2
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awk or/and cut command for reformatting sequence header identifiers of fastq file
fastq header identifiers reformat written 23 days ago by qinglong • 10 • updated 23 days ago by c_dampier • 50
2
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2
answers
156
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2
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Extract overrepresented sequences from fastq or fastqc
fastq overrepresented rna-seq fastqc written 25 days ago by michele.tebaldi.92 • 0 • updated 24 days ago by Ido Tamir ♦ 4.9k
1
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1
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109
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1
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How to take out sequences with barcode?
illumina fastq sequencing barcode written 25 days ago by suvratha • 20 • updated 24 days ago by Ido Tamir ♦ 4.9k
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2.6k
views
23 follow
0
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Tutorial: Fast download of FASTQ files from the European Nucleotide Archive (ENA)
fastq ena fastq-dump tutorial aspera written 8 months ago by ATpoint ♦ 14k
18
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0
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213
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8 follow
0
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Tool: sra-explorer : find SRA and FastQ download URLs in a couple of clicks
sra fastq tool sequence-read-archive download written 25 days ago by Phil Ewels • 310
7
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1
answer
152
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5 follow
1
answer
How are probabilities of insertions and deletions encoded in FASTQ?
indels fastq nanopore phred quality score pacbio written 26 days ago by shelkmike • 130 • updated 25 days ago by Devon Ryan ♦ 88k
10
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5
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11k
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10 follow
5
answers
Trimming fastq with quality
fastq fastx rna-seq trim fastqc written 4.6 years ago by RafaelMP • 110 • updated 26 days ago by genomax ♦ 64k
12
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2
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3.2k
views
9 follow
2
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fastq file on the basis of read length
fastq written 4.7 years ago by Varun Gupta • 1.1k • updated 28 days ago by A. Domingues • 1.8k
2
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0
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143
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0
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How to get proportion of specific sequence in fastq file
specific sequence fastq rna-seq written 4 weeks ago by lkianmehr • 30 • updated 4 weeks ago by shenwei356 ♦ 4.5k
0
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1
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125
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1
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Convert BAM files to paired end FASTQ
fastq bam samtools written 4 weeks ago by berke.toptas • 0 • updated 4 weeks ago by JC ♦ 7.6k
4
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1
answer
126
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1
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Number of reads in Fastq and Bowtie
genome fastq bowtie sequencing written 4 weeks ago by yl2019 • 10 • updated 4 weeks ago by h.mon ♦ 24k
1
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0
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290
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0
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Merging fastq files from two experiments
fastq ngs written 8 weeks ago by F • 3.4k • updated 5 weeks ago by Biostar ♦♦ 20
4
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2
answers
174
views
2
answers
Identify adapter sequences for trimming from Illumina paired end fastq files
adapter trimming fastq qc rna-seq written 5 weeks ago by mohammedtoufiq91 • 30 • updated 5 weeks ago by benformatics • 650
7
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1
answer
123
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1
answer
Detecting Klinefelter from genomic files
vcf fastq bam klinefelter written 5 weeks ago by paulcaiella • 0
5
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4
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250
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6 follow
4
answers
Reduce number of reads from 100M to 50M in the sample from the existing RNA-Seq fastq files
reads fastq sequence rna-seq written 6 weeks ago by mohammedtoufiq91 • 30 • updated 6 weeks ago by chen • 1.8k
1
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0
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153
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0
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Sub-sampling RNA-seq data
fastq bam sam rna-seq downsampling written 6 weeks ago by mohammedtoufiq91 • 30
4
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2
answers
1.6k
views
5 follow
2
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fastq to fasta conversion
fasta fastq go written 12 months ago by monicasteffi • 10 • updated 6 weeks ago by swbarnes2 ♦ 5.0k
4
votes
1
answer
119
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5 follow
1
answer
Software to extract run information from FASTQ headers?
fastq written 6 weeks ago by James Ashmore • 2.6k • updated 6 weeks ago by Pierre Lindenbaum ♦ 118k
5
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2
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221
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5 follow
2
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How to subset reads from fastq file to use as test file on a script
bash fastq sample subset written 7 weeks ago by msimmer92 • 150 • updated 7 weeks ago by baranserhatozer • 0
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