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Showing: fastq • reset
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<prev • 544 results • page 1 of 19 • next >
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Aligning multiple fastq files in Bowtie2
bowtie2 fastq alignment written 5 days ago by vineethmails • 0
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108
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At which position, should I expect a peak for miRNA sequenced FASTQ reads?
smallrna fastq rna-seq mirna written 10 days ago by bioinforesearchquestions • 90
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1
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93
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1
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How to run Breseq. FASTQ sequence record does not begin with @NAME line error.
fastq breseq written 11 days ago by taffners • 0 • updated 10 days ago by h.mon ♦ 8.7k
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1
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103
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1
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ENA bulk download all fastq files in study
fastq ena written 12 days ago by samuel.lipworth • 10
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109
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Salmon never completes, stuck on processing fragments
fastq salmon rna-seq written 14 days ago by jjrin • 10
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1
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138
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1
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Import the quality scores from a FASTQ file in Python 3 Biopython
fasta python3 fastq biopython quality written 15 days ago by cristian • 80 • updated 15 days ago by Vijay Lakhujani • 1.2k
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124
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Is it possible to manipulate Chromatogram ?
sanger fastq chromatogram .abi written 16 days ago by mhmtgenc85 • 20
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2
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121
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2
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Any tool to output unmapped or mapped_with_clips reads from a BAM to two fastq files for PE data?
unmapped bam fastq written 18 days ago by chen • 970 • updated 18 days ago by Pierre Lindenbaum ♦ 98k
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2
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Efficient Fastq Parsing And Manipulation In Java (With Or Without Biojava)
biojava fastq java parsing written 7.2 years ago by Michael Dondrup ♦ 43k • updated 18 days ago by holger.brandl • 10
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5 follow
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Searching for the common sequences in multiple (>2) fastq files
fastq sequence align common written 18 days ago by BPors • 10 • updated 18 days ago by guillaume.rbt • 330
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2
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196
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6 follow
2
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How to split a fastq file into each corresponding sample.fastq?
illumina fastq demultiplexing written 20 days ago by tiago211287 • 770 • updated 20 days ago by Dan D ♦ 6.2k
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1
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213
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1
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Trim Primers from FASTQ file
python fastq primer trimming sequencing written 22 days ago by anna.knight • 0
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1
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166
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1
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How to change Bioperl's Bio::SeqIO default sequence folding?
fasta fastq bioperl written 24 days ago by predeus • 360 • updated 24 days ago by Chris Fields • 1.8k
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problem using FastqExtract.pl script
fastq mitochondrial genome ngs written 25 days ago by liu_ming_xin • 0
7
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3
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387
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7 follow
3
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Extracting randomly subset of fastq reads from a huge file
fastq extract random written 29 days ago by Jessica_bioinfo • 10 • updated 26 days ago by Bioinformatics_NewComer • 210
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205
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bioawk output in original fastq format
fastq bioawk written 5 weeks ago by weixiaokuan • 70
4
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247
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Trimming adapters with custom scoring
reads sequence fastq alignment adapter written 5 weeks ago by aka001 • 160
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155
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input for Connor: FASTQ files from several lanes
fastq bam connor written 6 weeks ago by lien • 40
16
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7
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18k
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18 follow
7
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Merge Paired-End Reads
paired merge rna fastq written 5.9 years ago by Nicolas Rosewick • 5.3k • updated 6 weeks ago by DragonDNA • 50
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325
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5 follow
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Is there a way to download FASTq files from SRR IDs?
sra eutility fastq written 6 weeks ago by Paul • 50 • updated 6 weeks ago by h.mon ♦ 8.7k
4
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1
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189
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1
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Altering fastq sequence identifier
fastq written 6 weeks ago by fiona.newberry • 60 • updated 6 weeks ago by geek_y ♦ 8.0k
4
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1
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395
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1
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Normalizing Illumina fastq read-lengths from different GEO datasets
geo fastq rna-seq written 7 weeks ago by rbronste • 140
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1
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249
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1
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Downloading Fastq files from ENA using FTP
fastq ena rna-seq download written 7 weeks ago by nikelle.petrillo • 70 • updated 7 weeks ago by genomax ♦ 33k
5
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2
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351
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2
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How can I create a dummy dataset from my NGS whole-exome data?
next-gen fastq alignment written 7 weeks ago by olavur • 30 • updated 7 weeks ago by Brian Bushnell ♦ 14k
4
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3
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248
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7 follow
3
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extract subset of sequence
fastq rna-seq written 7 weeks ago by mail4malla • 0 • updated 7 weeks ago by Matt Shirley ♦ 7.8k
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1
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187
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1
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Galaxy Bowtie2 fastq recognition
bowtie2 fastq galaxy written 8 weeks ago by rbronste • 140
5
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1
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921
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1
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Identify sequencing machine based on fastq-file/reads
raw reads sequencing machine fastq sequencing written 13 months ago by Jenez • 470 • updated 8 weeks ago by vaslanzadeh • 0
11
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1
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303
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6 follow
1
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Removing PCR duplicates - fastq or BAM?
duplicates fastq alignment bam written 9 weeks ago by rbronste • 140 • updated 9 weeks ago by Istvan Albert ♦♦ 73k
16
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3
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3
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Tool: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
fastq tool afterqc polyg filtering quality control written 16 months ago by chen • 970
2
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1
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215
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1
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looking for a free command-line based quality score tool for sanger sequencing
fastq sanger sequencing abi quality score written 9 weeks ago by hfan22 • 10
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