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<prev • 133 results • page 1 of 5 • next >
5
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2
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2.2k
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RNA seq results as fpkm
fpkm rna-seq sequencing written 2.6 years ago by charbel.feghaly • 10 • updated 2 days ago by Ram ♦ 17k
2
votes
1
answer
105
views
1
answer
FPKM matrix after stringtie using ballgown
stringtie ballgown fpkm rna-seq written 21 days ago by Bioinfo • 240 • updated 21 days ago by Adrian Pelin • 2.2k
2
votes
2
answers
870
views
2
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problem with using gtf file in cufflinks in Galaxy
gtf fpkm cufflinks rna-seq written 2.4 years ago by nazaninhoseinkhan • 270 • updated 22 days ago by Biostar ♦♦ 20
1
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0
answers
643
views
0
answers
FPKM values from SE vs. PE RNA-Seq libraries
gene fpkm differential-expression rna-seq written 14 months ago by s.herrera706 • 0 • updated 5 weeks ago by Biostar ♦♦ 20
0
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1
answer
132
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1
answer
Why survival plots look different with same data?
survivalanalysis tcga fpkm survival rna-seq written 5 weeks ago by Biologist • 70 • updated 5 weeks ago by Friederike • 2.1k
8
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0
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179
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0
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Can I convert normalized counts from DESEQ2 into fpkm?
normalization fpkm deseq rna-seq written 6 weeks ago by nanoide • 10
10
votes
1
answer
252
views
1
answer
calculating the fpkm from htseq counts
htseq R fpkm rna-seq written 3 months ago by shenwei1376 • 0 • updated 3 months ago by Charles Warden ♦ 5.1k
4
votes
1
answer
211
views
1
answer
Question about Fpkm sum
fpkm rna-seq written 3 months ago by lyrae • 0 • updated 3 months ago by h.mon ♦ 19k
4
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1
answer
277
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1
answer
data pre-processing for WGCNA Algorithm
wgcna fpkm tcga rna-seq pre-processing written 4 months ago by modarzi • 20 • updated 4 months ago by Kevin Blighe ♦ 28k
2
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1
answer
570
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1
answer
Calculating fpkm from raw counts
R fpkm rna-seq written 4 months ago by vinayjrao • 100
0
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1
answer
263
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1
answer
RNA-seq of two non-model species: differential expression and FPKM
fpkm compatative transcriptomics rna-seq written 5 months ago by maxnest • 0 • updated 5 months ago by c.chakraborty • 80
1
vote
1
answer
772
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1
answer
Formula to calculate FPKM
fpkm rna-seq written 6 months ago by vinayjrao • 100 • updated 6 months ago by Rahul Sharma • 560
0
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0
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311
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0
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ChIP-seq output to FPKM
fpkm chip-seq written 7 months ago by Clara • 0
50
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3
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15k
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45 follow
3
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Tutorial: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
bioconductor fpkm forum rna-seq tutorial written 4.9 years ago by Irsan • 6.7k • updated 7 months ago by lhdcsu • 10
1
vote
1
answer
488
views
1
answer
RNA-seq heatmap output order
fpkm cluster 3.0 rna-seq heatmap written 8 months ago by Sathish • 30 • updated 8 months ago by Rashedul Islam • 290
2
votes
1
answer
673
views
1
answer
Calculate TPM from cuffnorm count data
fpkm cufflinks tpm cuffnorm rna-seq written 8 months ago by galozs • 20 • updated 8 months ago by Macspider • 2.5k
1
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2
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1.4k
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2
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How to plot PCA with fpkm values
pca plot rnaseq fpkm written 19 months ago by raya.girish • 20 • updated 8 months ago by Ram ♦ 17k
10
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0
answers
6.2k
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5 follow
0
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Cufflinks : Analysis Comparison With And Without A Gtf Reference File
fpkm cufflinks rna written 7.3 years ago by Hélène • 90 • updated 9 months ago by Biostar ♦♦ 20
4
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3
answers
843
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3
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FPKM or rlog from DEseq2 for machine learning analysis
normalization fpkm deseq2 rna-seq written 10 months ago by Silvia • 0 • updated 10 months ago by igor ♦ 6.5k
0
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1
answer
1.2k
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1
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comparisson of RNA-seq FPKMs across samples
fpkm rna-seq written 2.5 years ago by lidia.mateo • 0 • updated 10 months ago by Zhao fei • 0
0
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1
answer
415
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1
answer
Is it possible to analyze together rna seq outputs from cufflinks and rsem?
fpkm cufflinks rna-seq rsem written 11 months ago by SandraGarcia • 0 • updated 11 months ago by Kevin Blighe ♦ 28k
0
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0
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732
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0
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Differential Expressed Genes by FPKM expression matrix
R fpkm rna-seq deg written 11 months ago by morteza.kouhsar • 0
1
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2
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997
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2
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Accessing Expression Levels for Genes of Interest from GEO Experiments
geo fpkm rna rna-seq lncrna written 2.5 years ago by a.aiezza • 30 • updated 11 months ago by Biostar ♦♦ 20
0
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1
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1.7k
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1
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Data for drawing Heatmaps (RNA-seq)
fpkm heatmap tpm rna-seq tmm written 11 months ago by sd.gamboa.t • 0 • updated 11 months ago by Corentin • 170
9
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1
answer
2.4k
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7 follow
1
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heatmap using FPKM values
fpkm rna-seq written 19 months ago by ashish • 200 • updated 11 months ago by moldach • 70
0
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1
answer
560
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1
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Get FPKM across replicates without doing a differential expression
fpkm dna-seq rna-seq written 11 months ago by crouch.k • 10 • updated 11 months ago by Kevin Blighe ♦ 28k
38
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2
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69k
views
25 follow
2
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 5.5 years ago by biorepine • 1.4k • updated 12 months ago by Renesh • 1.3k
11
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2
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8.5k
views
5 follow
2
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Converting TCGA expression data from FPKM to TPM
fpkm tcga tpm rna-seq expression written 2.9 years ago by Alex Reynolds ♦ 25k • updated 12 months ago by fabio-verdao • 0
3
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0
answers
2.0k
views
0
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Calculating FPKM from HTSeq counts table
htseq R fpkm rna-seq written 12 months ago by ann081993 • 0
0
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0
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555
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0
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RNA-seq compare FPKM's or fold change of different organisms
fpkm gene expression foldchange rna-seq written 13 months ago by jehu • 20
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