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5
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1
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1.9k
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1
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Rna-Seq Expression For 3' Transcripts
fpkm rna written 8.9 years ago by Sander Timmer700 • updated 3 hours ago by Biostar ♦♦ 20
1
vote
1
answer
54
views
1
answer
htseq-count without GTF?
htseq count fpkm htseq-count gtf written 7 days ago by blur140 • updated 7 days ago by ATpoint40k
0
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0
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104
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0
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65
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3
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20k
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59 follow
3
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Tutorial: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
bioconductor fpkm forum rna-seq tutorial written 7.0 years ago by Irsan7.2k • updated 14 days ago by RamRS30k
6
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2
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2.8k
views
2
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Clustering of genes using FPKM
R fpkm bioconductor clustering rna-seq written 5.9 years ago by Ron1.0k • updated 6 weeks ago by Hamid Ghaedi580
1
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1
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710
views
1
answer
RSEM Error - rsem-calculate-expression
rsem-calculate-expression fpkm rsem rna-seq written 11 months ago by anoo0 • updated 8 weeks ago by svp240
0
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0
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144
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0
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how to calculate p-value of Cuffdiff result?
p-value fpkm cuffdiff rna-seq written 11 weeks ago by dahun7310 • updated 10 weeks ago by Biostar ♦♦ 20
2
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0
answers
3.1k
views
0
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Calculating Fpkm/Rpkm For Each Read Group Given A Gtf File
gtf rpkm fpkm rna-seq written 6.6 years ago by Nathan S. Watson-Haigh200 • updated 4 months ago by Biostar ♦♦ 20
1
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1
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167
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1
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0
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0
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234
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0
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46
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3
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94k
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30 follow
3
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Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 7.6 years ago by biorepine1.5k • updated 11 months ago by Renesh1.9k
6
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3
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466
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3
answers
7
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1
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566
views
1
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Cox proportional hazards regression use log2 fpkm
fpkm cox written 12 months ago by MatthewP780 • updated 12 months ago by dsull1.6k
2
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2
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783
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2
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2
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0
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538
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0
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2
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0
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596
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0
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How to make differential expression analysis with normalized data?
fpkm deg rna-seq written 13 months ago by LuisNagano70 • updated 13 months ago by ATpoint40k
0
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1
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1.3k
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1
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Question about PCA plot using RPKM/FPKM.
fpkm pca rna-seq written 2.0 years ago by hxlei61390 • updated 14 months ago by Biostar ♦♦ 20
11
votes
2
answers
2.2k
views
8 follow
2
answers
How to do FPKM differential analysis?
fpkm deseq rna-seq limma written 15 months ago by zhaoliang030210 • updated 15 months ago by kristoffer.vittingseerup3.4k
0
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1
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1.8k
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1
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FPKM for Normal vs Tumor
fpkm cufflinks rna-seq written 5.9 years ago by Ron1.0k • updated 16 months ago by Biostar ♦♦ 20
0
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1
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1.9k
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1
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comparisson of RNA-seq FPKMs across samples
fpkm rna-seq written 4.6 years ago by lidia.mateo0 • updated 16 months ago by Biostar ♦♦ 20
1
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0
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513
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0
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0
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0
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1.7k
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0
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Calculating FPKM and TPM by hand from htseq-count output?
htseq fpkm tpm rna-seq written 18 months ago by Joel Wallenius70 • updated 17 months ago by Biostar ♦♦ 20
0
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1
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764
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1
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Ensembl ID and counts to FPKM/TPM
R fpkm exon tpm rna-seq written 17 months ago by jordan.mandel0 • updated 17 months ago by h.mon31k
0
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1
answer
342
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1
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how to convert UniqueReadCounts.txt to FPKM
fpkm rna-seq written 18 months ago by doaamohamedsamir0 • updated 18 months ago by Bastien HervĂ©4.8k
2
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3
answers
4.2k
views
5 follow
3
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How to convert featureCounts to FPKM?
R fpkm featurecounts rna-seq written 2.1 years ago by Biologist190 • updated 18 months ago by Ahmed Alhendi50
2
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2
answers
5.7k
views
2
answers
How to perform FPKM on raw reads in R
R fpkm rna-seq sequencing written 3.4 years ago by manish2007201310 • updated 19 months ago by Ahmed Alhendi50
9
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2
answers
11k
views
11 follow
2
answers
Calculating FPKM after htseq-count
htseq fpkm rna-seq written 3.7 years ago by Fill70 • updated 19 months ago by Ahmed Alhendi50
7
votes
1
answer
396
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1
answer
Is possible to recreate RNASeq count dataset from a dataset normalized with FPKM ?
fpkm rna-seq written 20 months ago by elmahy200590 • updated 20 months ago by h.mon31k
7
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3
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3.0k
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3
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FPKM or rlog from DEseq2 for machine learning analysis
normalization fpkm deseq2 rna-seq written 3.0 years ago by Silvia10 • updated 20 months ago by Charles Warden7.9k
7
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3
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3.2k
views
6 follow
3
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Converting TPM to FPKM
fpkm tpm rna-seq written 3.5 years ago by alexahes10 • updated 21 months ago by Charles Warden7.9k
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