Showing: fpkmreset
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How to perform FPKM on raw reads in R
R fpkm rna-seq sequencing written 6 days ago by manish200720130 • updated 6 days ago by Istvan Albert ♦♦ 71k
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Bowtie2/HISAT using single-end to generate FPKM???
bowtie2 fpkm hisat rna-seq rpkm written 4 weeks ago by jamieson.pierce10 • updated 4 weeks ago by Brian Bushnell12k
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Calculating FPKM values from HT-counts
rpkm fpkm rna-seq written 6 weeks ago by rbronste110 • updated 6 weeks ago by Devon Ryan68k
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Converting TPM to FPKM
fpkm tpm rna-seq written 7 weeks ago by alexahes10 • updated 7 weeks ago by karl.stamm3.1k
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How to turn a FPKM table in a matrix that can be analyzed in R?
R fpkm deseq rna-seq matrix written 3 months ago by JimiOli0 • updated 3 months ago by Carlo Yague3.0k
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How to plot PCA with fpkm values
pca plot rnaseq fpkm written 4 months ago by raya.girish20 • updated 4 months ago by igor4.3k
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heatmap using FPKM values
fpkm rna-seq written 4 months ago by ashish100
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Calculating FPKM after htseq-count
htseq fpkm rna-seq written 4 months ago by Fill70
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How do I find an example of how to calculate FPKM with cufflinks?
fpkm cufflinks written 7 months ago by blur50 • updated 7 months ago by vchris_ngs3.5k
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Tissue Specificity index (tau) should FPKM data be log transformed?
tau fpkm rna-seq written 10 months ago by microfuge470 • updated 9 months ago by kennethcondon2007800
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PCA tpm fpkm
pca fpkm tpm written 9 months ago by riccardo40 • updated 9 months ago by Ar690
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Top 20% expressed orthologus genes in two species
rpkm fpkm rna-seq written 12 months ago by Saad Khan310 • updated 10 months ago by Biostar ♦♦ 20
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FPKM not suitable for DE?
normalization fpkm rna-seq written 3.0 years ago by nevev90 • updated 12 months ago by Biostar ♦♦ 20
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Length of transcripts of mm9
biomart fpkm rna-seq written 12 months ago by qwzhang060140 • updated 12 months ago by EagleEye4.1k
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problem with using gtf file in cufflinks in Galaxy
gtf fpkm cufflinks rna-seq written 13 months ago by nazaninhoseinkhan180 • updated 13 months ago by WouterDeCoster19k
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FPKM vs raw counts vs RPKM
rpkm fpkm rna-seq raw counts written 2.5 years ago by NHEJ240 • updated 13 months ago by Daniel3.4k
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FPKM cutoff based on data from one treatment?
fpkm rna-seq written 14 months ago by miumiul3310 • updated 14 months ago by vchris_ngs3.5k
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