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<prev • 72 results • page 1 of 3 • next >
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Using GenomeDataCommons and associating UUIDs with RNA-seq files
R gdc rna-seq genomicdatacommons written 5 months ago by KRR • 0
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293
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GDC-client download problem
tcga gdc written 7 months ago by pandafish • 0
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1
answer
332
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1
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GDC portal : search by drug
rnaseq gdc written 7 months ago by guillaume.rbt • 790 • updated 7 months ago by Kevin Blighe ♦ 59k
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1
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283
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1
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TCGA --- MAF files: no values showing for case_id column
wxs gdc-client tcga gdc cancer written 7 months ago by this_is_dieulz • 10 • updated 7 months ago by Kevin Blighe ♦ 59k
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457
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gdc-client download: ERROR: Max retries exceeded
gdc-client gdc download written 10 months ago by Shicheng Guo • 8.2k
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1
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285
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1
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Lab test values in TCGA
tcga gdc clinical cancer written 11 months ago by Hendrik • 0
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293
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In MAF files, does c_position is equivalent to cDNA_positions?
maf genome cdna gdc written 13 months ago by mariamcurbelo2061 • 0
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3
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1.2k
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3
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PanCanAtlas EBPlusPlus-corrected RNA-seq TCGA dataset
ebplusplus tcga gdc rna-seq written 15 months ago by Ld_60 • 30 • updated 14 months ago by user31888 • 80
2
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1
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346
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1
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duplicate UUIDs, yet unique legacy UUIDs (and count data) in TCGA data
tcga gdc rna-seq written 14 months ago by david.peeney • 30 • updated 14 months ago by Kevin Blighe ♦ 59k
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10 follow
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Sample names for TCGA data from GDC-legacy archive
tcga gdc rna-seq written 2.2 years ago by Vasu • 430 • updated 14 months ago by david.peeney • 30
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13k
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2
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Tutorial: TCGA UUIDS to TCGA barcode (SampleID) in R
R tutorial next-gen gdc tcga written 3.6 years ago by martinguerrerog89 • 300 • updated 14 months ago by david.peeney • 30
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Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
clinicaldata survival tcga gdc cbioportal written 15 months ago by Vasu • 430
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515
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Help convert GDC exploration url to API download?
portal mutation gdc written 17 months ago by simplitia • 30 • updated 16 months ago by Biostar ♦♦ 20
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591
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Job: Senior Bioinformatician, Genomic Data Commons team at the University of Chicago
bioinformatics job gdc genomics cancer written 16 months ago by Danielle • 310
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382
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Annotation of Methylation data in GDC Portal
dna methylation tcga illumina 450k gdc written 18 months ago by noorpratap.singh • 290
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2
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5 follow
2
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TCGA/GDC FPKM vs FPKM-UQ
gdc rna-seq written 3.2 years ago by igor ♦ 10k • updated 18 months ago by solo7773 • 70
57
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3
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36 follow
3
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Tutorial: Protocol To Downlad TCGA Data From GDC
tutorial tcga methylation gdc download written 3.8 years ago by Shicheng Guo • 8.2k • updated 19 months ago by ATpoint ♦ 34k
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GDC TCGA: cannot find CNV files by their UUIDs
uuid tcga gdc cnv written 19 months ago by Ld_60 • 30 • updated 19 months ago by RamRS ♦ 27k
3
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1
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Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R gdc rna-seq dna methylation written 19 months ago by rjactonspsfcf • 120
3
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1
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937
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1
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Firebrowse Data vs GDC Portal Data
firebrowse R tcga gdc cnv written 19 months ago by jmw730 • 0 • updated 19 months ago by Kevin Blighe ♦ 59k
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1
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661
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1
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How to decode patient barcode inTCGA database ?
R tcga patient gdc written 22 months ago by Björn • 40 • updated 20 months ago by zx8754 ♦ 9.2k
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637
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1
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GDC data portal - Tumour and Adjacent normal
dna methylation tcga gdc rna-seq written 20 months ago by rjactonspsfcf • 120 • updated 20 months ago by Kevin Blighe ♦ 59k
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1
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1.5k
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1
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GDC portal data download
tcga gdc download gdcportal written 22 months ago by a01039012387 • 10
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1
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967
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1
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GDC portal barcode / metadata
tcga gdc rna-seq written 22 months ago by silvia.casola8 • 0 • updated 22 months ago by noorpratap.singh • 290
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3
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8 follow
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Samples with same TCGA barcode in TCGA data
tcga gdc rna-seq written 2.1 years ago by Vasu • 430 • updated 22 months ago by Shixiang • 50
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515
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0
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Clarification on GDC Methylation data
dataset tcga methylation gdc written 22 months ago by 9606 • 320
8
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1
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2.6k
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7 follow
1
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GDC server down???
tcgabiolinks array methylation gdc written 23 months ago by Gabriel Wajnberg • 70 • updated 23 months ago by Jade • 40
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Converting UUID downloaded from GDC to TCGA names
phyton gdc written 23 months ago by emiliano.traini • 0
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1
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Find Information about TCGA samples from GDC data portal
tcga gdc sample information rna-seq written 23 months ago by lawarde.ankita1 • 60 • updated 23 months ago by svlachavas • 670
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Retrieving UUIDs from TCGA Barcodes in the GDC File Repository
barcode uuid tcga gdc written 2.8 years ago by jjdan • 0 • updated 2.0 years ago by Kevin Blighe ♦ 59k
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