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126 results • Page
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Herald:
The Biostar Herald for Monday, April 11, 2022
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2.1 years ago by
Biostar
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The Biostar Herald for Monday, September 12, 2022
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20 months ago by
Biostar
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136
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The Biostar Herald for Monday, May 13, 2024
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2 days ago by
Biostar
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The Biostar Herald for Wednesday, April 03, 2024
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6 weeks ago by
Biostar
2.8k
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The Biostar Herald for Monday, September 26, 2022
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19 months ago by
Biostar
2.8k
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640
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Herald:
The Biostar Herald for Tuesday, July 19, 2022
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22 months ago by
Biostar
2.8k
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708
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The Biostar Herald for Monday, February 06, 2023
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15 months ago by
Biostar
2.8k
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499
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The Biostar Herald for Monday, October 23, 2023
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6 months ago by
Biostar
2.8k
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699
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The Biostar Herald for Monday, February 20, 2023
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15 months ago by
Biostar
2.8k
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426
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The Biostar Herald for Monday, November 20, 2023
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5 months ago by
Biostar
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841
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The Biostar Herald for Thursday, May 11, 2023
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12 months ago by
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541
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The Biostar Herald for Monday, December 12, 2022
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17 months ago by
Biostar
2.8k
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726
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The Biostar Herald for Wednesday, February 15, 2023
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15 months ago by
Biostar
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The Biostar Herald for Wednesday, August 09, 2023
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9 months ago by
Biostar
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646
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The Biostar Herald for Tuesday, October 05, 2021
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2.6 years ago by
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619
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The Biostar Herald for Thursday, August 24, 2023
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8 months ago by
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2.8k
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710
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The Biostar Herald for Monday, March 13, 2023
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14 months ago by
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2.8k
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655
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The Biostar Herald for Monday, January 09, 2023
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16 months ago by
Biostar
2.8k
4
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441
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The Biostar Herald for Monday, November 06, 2023
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6 months ago by
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2.8k
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614
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The Biostar Herald for Monday, December 05, 2022
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17 months ago by
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2.8k
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846
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The Biostar Herald for Tuesday, May 23, 2023
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11 months ago by
Biostar
2.8k
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633
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The Biostar Herald for Monday, August 01, 2022
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21 months ago by
Biostar
2.8k
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625
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The Biostar Herald for Wednesday, October 13, 2021
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2.6 years ago by
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2.8k
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644
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Herald:
The Biostar Herald for Monday, October 31, 2022
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18 months ago by
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2.8k
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542
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Herald:
The Biostar Herald for Monday, August 22, 2022
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21 months ago by
Biostar
2.8k
3
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652
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Herald:
The Biostar Herald for Wednesday, July 27, 2022
herald
updated 21 months ago by
Istvan Albert
100k • written 21 months ago by
Biostar
2.8k
126 results • Page
3 of 3
Recent Votes
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Answer: In one PCA plot, can I calculate the percentage of different factors that contri
Answer: Calculate allelic frequency from VEP output vcf file
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Recent Replies
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
hophuquy0944
• 0
my blast is latest version 2.15. I don't know what you want me to see in this link.
Answer: scRNAseq quality control weird double curve in nFeature vs nCount plot
by
valdirbarth
▴ 20
Is it possible that the cells that have their VDJ sequenced, those VDJ reads are not contributing to new genes detected? So you might be …
Comment: ggrepel function: geom_text_repel()
by
ntsopoul
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The plot looks confusing, chek the documentation there is an attribute called force. If you reduce the value you should get better results.…
Comment: Sequencing Depth (Read Depth) Calculations
by
LucisTheFather
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Understood! Gonna try those two!
Comment: Sequencing Depth (Read Depth) Calculations
by
LucisTheFather
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Thank u very much!
Comment: How to extract cells of different species after mapping with combined genome?
by
GenoMax
142k
You have used the tag `snRNAseq`. I am not familiar with singleron tech but if you have sequence data you may be able to use `xenome` or `b…
Comment: bbmerge (bbmap) ~ error with insert size file output
by
GenoMax
142k
It may be best to go back to the original data and then do `bbmerge.sh` on it to get original insert size estimates (before any operations …
Comment: bbmerge (bbmap) ~ error with insert size file output
by
chrisk
• 0
Hi Brian, Thank you and apologies for the extra future revision works. Out of curiosity we disabled neural networks 'nn=f' and the file o…
Comment: bbmerge (bbmap) ~ error with insert size file output
by
chrisk
• 0
Hi Genomax, This is the thread: https://www.biostars.org/p/9582467/ Cheers, Chris
Comment: Inquiry about deseq2 transformation
by
Chen
• 0
that's helpful, thanks :)
Comment: bbmerge (bbmap) ~ error with insert size file output
by
Brian Bushnell
20k
Ah, this is a little embarrassing; those are the vectors for the neural network. I overloaded a field that was being used for the insert s…
Comment: Annotating file using bcftools
by
kl
▴ 10
Thanks - I corrected it. It doesn't seem to annotate. I converted to binary after which is what is shown below. It is not the output I want…
Comment: Filtering VCF files based on VAF giving incorrect results
by
Arton
▴ 10
These are valid questions. Does your code address the concerns you've raised? From what I understand, FilterVcf is primarily designed for h…
Answer: Calculate allelic frequency from VEP output vcf file
by
ramiro.barrantes
• 0
Found the answer here!! https://github.com/Illumina/strelka/blob/master/docs/userGuide/README.md#somatic Although this leads to a str…
Comment: Using VEP annotation output as the input for a second VEP annotation
by
Ram
43k
That's not a valid reason to delete the post. If that information was sensitive, posting it here was a mistake in the first place. I don't …
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