Showing: hmmerreset
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Filtering HmmScan Domain Results
protein domain threshold hmmscan filtering hmmer written 28 days ago by hewaholax0 • updated 27 days ago by a.zielezinski8.4k
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Comparing two HMM profiles
alignment sequence hmm hmmer written 23 months ago by kk19900 • updated 3 months ago by Biostar ♦♦ 20
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Align protein sequence to Pfam file using HMMER3.0 (hmmalign)
hmmer protein pfam written 6 months ago by Xiaokang ZH40 • updated 4 months ago by Biostar ♦♦ 20
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hmmsearch didn't work with nucleotide genome
genome nucleotide genome hmmer hmmsearch tool written 5 months ago by lbroetto0 • updated 5 months ago by Alex Reynolds25k
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Retrieve sequences that generated a HMM profile
hmmer written 6 months ago by camachofrancine80 • updated 6 months ago by Jean-Karim Heriche16k
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Running HMMER via Python
profile hmm python hmmer hmm cli written 6 months ago by Ghoti40
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HMMER: Failed to open target sequence database for reading
database phmmer hmmer written 11 months ago by Cayro0 • updated 11 months ago by cryptogenomicon80
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How to generate a multiple HMM file with HMMER?
hmmer stockholm msa written 14 months ago by yarmda0 • updated 14 months ago by Sej Modha3.4k
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Parse hmm(er) profiles in R
hmmer profile parse hmm R written 18 months ago by hivemind10
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Installation issues with hmmer2
hmmer2 hmmsearch prokka hmmer written 3.8 years ago by JV340 • updated 22 months ago by Ram17k
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Find orthologs using EggNOG and local HMMER search for multiple transcripts
orthologs eggnog rna-seq gene hmmer written 22 months ago by Farbod3.1k • updated 22 months ago by jhc2.7k
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hmmpress error with a hmm database
hmmpress hmm hmmer written 3.9 years ago by shyamgc010 • updated 22 months ago by satanicodr110
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nucleotide Hidden Markov Model search
nhmmer hmmer written 24 months ago by peri.tobias0 • updated 22 months ago by Biostar ♦♦ 20
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First steps Hmmer
genome alignment sequence hmmer written 2.1 years ago by mayegidio0 • updated 24 months ago by Biostar ♦♦ 20
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Combining HMMs and fasta for HMMER searches
fasta hmm hmmer written 2.0 years ago by Anand Rao160 • updated 2.0 years ago by Jean-Karim Heriche16k
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Bio::Searchio For Hmmer3 Output (Best Domain E-Value And I-Evalue)
bioperl hmmer written 4.5 years ago by greentailedmouse40 • updated 2.1 years ago by Biostar ♦♦ 20
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