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<prev • 82 results • page 1 of 3 • next >
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Top hit from phmmer
gene annotation phmmer hmmer genome written 7 days ago by msobol • 10
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117
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Some question in Hmmer package
sequence alignment hmmer written 13 days ago by howenwy2 • 0
1
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1
answer
788
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1
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hmmsearch to show all sequences
multifasta hmmsearch hmmer written 2.7 years ago by srx3001 • 10 • updated 17 days ago by jscience • 0
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1
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126
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1
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Make a multiple sequence alignment with a HMMER hmmsearch output?
hmmer written 5 weeks ago by westin.kosater • 10 • updated 5 weeks ago by h.mon ♦ 24k
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0
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111
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Trying to interpret the content of a hmm file from HMMER3
hmmer written 5 weeks ago by westin.kosater • 10
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1
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143
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1
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Profile HMM hidden state interpretation
profile hmm hmm hmmer written 9 weeks ago by jaip217 • 20 • updated 9 weeks ago by Jean-Karim Heriche ♦ 18k
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3
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3.7k
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6 follow
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Visualizing Hmm Files Of Hmmer3
hmm visualization hmmer written 7.8 years ago by Cjt • 370 • updated 10 weeks ago by leon.kuchenbecker • 0
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110
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envelope and alignment coordinates in hmmsearch result
sequence bioinformatics alignment hmmsearch hmmer written 11 weeks ago by sanjeet00001992 • 0
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1.3k
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Tutorial: Fixing "Error: Unrecognized format, trying to open hmm file Pfam-A.hmm for reading."
genome tutorial hmmer pfam written 17 months ago by rpalmavejares • 20 • updated 3 months ago by h.mon ♦ 24k
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236
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Differences in hit number between Pfam, HMMER and searching UniProt with domain name
protein database alignment uniprot pfam hmmer written 4 months ago by skvaller • 0
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184
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./configure wouldn't compile HMMER v3.2.1
installation cygwin hmmer written 4 months ago by JernejT • 0
8
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2
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4.5k
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2
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Hmmbuild: How To Choose The Best Alignment For Hmm Model
alignment hmm hmmer written 8.0 years ago by Leszek ♦ 4.0k • updated 5 months ago by michau • 10
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1
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1.1k
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1
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Bio.SearchIO.HmmerIO only showing the best score domain
python hmmer written 3.0 years ago by Selenocysteine • 540 • updated 6 months ago by Biostar ♦♦ 20
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317
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Generate HMM profile without an MSA (hmmer)
hmm msa hmmer written 7 months ago by elenatea.russo • 20
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2
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812
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6 follow
2
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Filtering HmmScan Domain Results
protein domain threshold hmmscan filtering hmmer written 7 months ago by hewaholax • 0 • updated 7 months ago by a.zielezinski ♦ 8.6k
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359
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Best way to identify proteins within a family?
domain orthologs oma homology hmmer written 9 months ago by Solowars • 40
1
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1
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1.5k
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1
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Comparing two HMM profiles
alignment sequence hmm hmmer written 2.5 years ago by kk1990 • 0 • updated 10 months ago by Biostar ♦♦ 20
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726
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Align protein sequence to Pfam file using HMMER3.0 (hmmalign)
hmmer protein pfam written 13 months ago by Xiaokang ZH • 40 • updated 11 months ago by Biostar ♦♦ 20
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492
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hmmsearch didn't work with nucleotide genome
genome nucleotide genome hmmer hmmsearch tool written 12 months ago by lbroetto • 0 • updated 12 months ago by Alex Reynolds ♦ 27k
4
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2
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440
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2
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Retrieve sequences that generated a HMM profile
hmmer written 13 months ago by camachofrancine • 90 • updated 13 months ago by Jean-Karim Heriche ♦ 18k
0
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1
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371
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1
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Exact match with query architecture option for local version of HMMER
hmmsearch hmmer written 13 months ago by Sej Modha ♦ 4.1k
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929
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Running HMMER via Python
profile hmm python hmmer hmm cli written 13 months ago by Ghoti • 50
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527
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HMMER-make check fail
hmmer installation win10 cygwin hmmer written 13 months ago by weiyuanchen2015 • 0
2
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3
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1.3k
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3
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Problem in execution of the commands in HMMER
hmmbuild hmmscan hmmer written 15 months ago by ambika_dudhate • 0
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448
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Pfam/Hmmer redundant annotations
pfam annotations hmmer written 15 months ago by Selenocysteine • 540
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1.5k
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1
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HMMER: Failed to open target sequence database for reading
database phmmer hmmer written 18 months ago by Cayro • 0 • updated 18 months ago by cryptogenomicon • 150
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876
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Hmmer Alignment input parse error
hmmer alignment error parse written 21 months ago by hivemind • 10
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1
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1.5k
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1
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How to generate a multiple HMM file with HMMER?
hmmer stockholm msa written 21 months ago by yarmda • 0 • updated 21 months ago by Sej Modha ♦ 4.1k
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495
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Which profile search programs are best? Comparison studies?
hmmer written 22 months ago by kgbenn123 • 10
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1
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924
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1
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Parse hmm(er) profiles in R
hmmer profile parse hmm R written 2.1 years ago by hivemind • 10
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