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MACS, effective genome size
macs chip-seq written 5.9 years ago by marina-orlova70 • updated 10 weeks ago by Biostar ♦♦ 20
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109
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UMI with MACS
macs umi chip-seq written 11 months ago by Richard570 • updated 11 months ago by i.sudbery7.3k
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255
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7
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Duplicated ATAC-Seq peaks called by MACS2
macs peak calling macs2 atac-seq written 14 months ago by Gary480 • updated 14 months ago by geek_y10k
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2
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eCLIP peak calling
macs peak calling clip galaxy written 17 months ago by GiusiG0 • updated 15 months ago by Ashley50
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1.3k
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1
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MACS usage for IgG and treatment
macs normalization chip-seq written 5.3 years ago by TriS4.2k • updated 16 months ago by Biostar ♦♦ 20
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2.4k
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6 follow
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1.2k
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Possible reason for no peaks generated by MACS2
macs chip-seq written 18 months ago by Louis Kok20 • updated 17 months ago by Biostar ♦♦ 20
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When using MACS2 with -f BAM, it is possible to have a shift other than 0?
macs macs2 written 19 months ago by Lucy40 • updated 18 months ago by Biostar ♦♦ 20
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5 follow
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Effective Genome Size In Macs [Hg19]
macs genomics written 7.4 years ago by Dataminer2.7k • updated 19 months ago by solo777370
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"olambda_treat_afterfiting_all" output file from MACS
macs bedgraph output written 5.4 years ago by akivab2100 • updated 20 months ago by Biostar ♦♦ 20
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ATAC-seq macs2 peak calling bampe mode extension shift
macs peaks chip-seq atac-seq written 22 months ago by nanoide40 • updated 22 months ago by Ricardo A.90
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MACS2 output (fold enrichment)
macs chipseq macs2 written 22 months ago by samantha_jeschonek50 • updated 22 months ago by roma120
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3
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3
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ATAC-seq peak calling with MACS
macs peaks chip-seq atac-seq written 3.6 years ago by igor9.9k • updated 23 months ago by ZheFrench280
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773
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1
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How to add Unique Peak ID to a bed file created from MACS for HOMER analysis
macs homer chip-seq written 24 months ago by Bella_p50 • updated 24 months ago by Benn7.9k
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Does MACS score correlate with binding strength
macs chip-seq written 2.4 years ago by varsha61990 • updated 2.2 years ago by Biostar ♦♦ 20
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7 follow
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MACS for chip-seq: difference between sonication size(bandwidth) and fragment size?
macs chip-seq written 2.4 years ago by salamandra280 • updated 2.4 years ago by ATpoint32k
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How to Find the Peak Summit Location for Broad Peaks in MACS?
macs chip-seq broad peak summit written 3.2 years ago by Neberirni0 • updated 2.5 years ago by ildem50
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macs 1.4 (negative) peaks
macs chip-seq written 3.0 years ago by fabrizio.frasca0 • updated 2.6 years ago by Biostar ♦♦ 20
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Is ChIP-seq control file in peak calling must whole genome size??
macs sequence chip-seq tool written 2.7 years ago by dhehdqls0 • updated 2.7 years ago by geek_y10k
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5.0k
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Peak Calling Biasing!!! [Macs14]
macs chip-seq written 7.8 years ago by Sukhdeep Singh10k • updated 2.7 years ago by Biostar ♦♦ 20
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Define exact peak borders
macs peak calling written 2.8 years ago by ATpoint32k • updated 2.8 years ago by Charles Plessy2.7k
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