Showing: macsreset
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7
votes
1
answer
129
views
1
answer
Duplicated ATAC-Seq peaks called by MACS2
macs peak calling macs2 atac-seq written 17 days ago by Gary450 • updated 16 days ago by geek_y9.1k
2
votes
2
answers
244
views
2
answers
eCLIP peak calling
macs peak calling clip galaxy written 3 months ago by GiusiG0 • updated 5 weeks ago by Ashley40
2
votes
1
answer
1.1k
views
1
answer
MACS usage for IgG and treatment
macs normalization chip-seq written 4.2 years ago by TriS3.6k • updated 3 months ago by Biostar ♦♦ 20
6
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2
answers
1.4k
views
6 follow
2
answers
1
vote
0
answers
347
views
0
answers
Possible reason for no peaks generated by MACS2
macs chip-seq written 4 months ago by Louis Kok10 • updated 3 months ago by Biostar ♦♦ 20
1
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1
answer
2.4k
views
1
answer
0
votes
0
answers
224
views
0
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When using MACS2 with -f BAM, it is possible to have a shift other than 0?
macs macs2 written 5 months ago by Lucy0 • updated 4 months ago by Biostar ♦♦ 20
-1
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2
answers
6.0k
views
5 follow
2
answers
Effective Genome Size In Macs [Hg19]
macs genomics written 6.3 years ago by Dataminer2.6k • updated 5 months ago by solo777370
0
votes
0
answers
855
views
0
answers
"olambda_treat_afterfiting_all" output file from MACS
macs bedgraph output written 4.2 years ago by akivab260 • updated 6 months ago by Biostar ♦♦ 20
1
vote
1
answer
327
views
1
answer
4
votes
2
answers
937
views
2
answers
ATAC-seq macs2 peak calling bampe mode extension shift
macs peaks chip-seq atac-seq written 8 months ago by nanoide10 • updated 8 months ago by Ricardo A.90
0
votes
3
answers
765
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3
answers
MACS2 output (fold enrichment)
macs chipseq macs2 written 8 months ago by samantha_jeschonek50 • updated 8 months ago by roma120
29
votes
3
answers
16k
views
3
answers
ATAC-seq peak calling with MACS
macs peaks chip-seq atac-seq written 2.5 years ago by igor7.3k • updated 9 months ago by ZheFrench190
4
votes
1
answer
391
views
1
answer
How to add Unique Peak ID to a bed file created from MACS for HOMER analysis
macs homer chip-seq written 10 months ago by Bella_p50 • updated 10 months ago by b.nota6.0k
0
votes
1
answer
420
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1
answer
0
votes
0
answers
299
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0
answers
3
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0
answers
520
views
0
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Does MACS score correlate with binding strength
macs chip-seq written 14 months ago by varsha61970 • updated 13 months ago by Biostar ♦♦ 20
9
votes
4
answers
3.9k
views
7 follow
4
answers
5
votes
1
answer
945
views
1
answer
MACS for chip-seq: difference between sonication size(bandwidth) and fragment size?
macs chip-seq written 15 months ago by salamandra180 • updated 15 months ago by ATpoint13k
0
votes
1
answer
1.1k
views
1
answer
How to Find the Peak Summit Location for Broad Peaks in MACS?
macs chip-seq broad peak summit written 2.1 years ago by Neberirni0 • updated 15 months ago by ildem20
0
votes
0
answers
843
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0
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macs 1.4 (negative) peaks
macs chip-seq written 22 months ago by fabrizio.frasca0 • updated 17 months ago by Biostar ♦♦ 20
3
votes
1
answer
638
views
1
answer
Is ChIP-seq control file in peak calling must whole genome size??
macs sequence chip-seq tool written 18 months ago by dhehdqls0 • updated 18 months ago by geek_y9.1k
1
vote
0
answers
4.6k
views
0
answers
Peak Calling Biasing!!! [Macs14]
macs chip-seq written 6.7 years ago by Sukhdeep Singh9.6k • updated 19 months ago by Biostar ♦♦ 20
0
votes
1
answer
454
views
1
answer
Define exact peak borders
macs peak calling written 19 months ago by ATpoint13k • updated 19 months ago by Charles Plessy2.6k
10
votes
1
answer
1.3k
views
1
answer
Single-end control & Paired-end sample in Chip-seq
macs chip-seq peakcalling written 20 months ago by anu014160 • updated 20 months ago by Devon Ryan88k
3
votes
0
answers
876
views
0
answers
Problems with MACS ChIP-Seq peak calling
macs peak calling chip-seq written 20 months ago by dcheng10 • updated 20 months ago by YaGalbi1.4k
0
votes
0
answers
615
views
0
answers
2
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1
answer
1.8k
views
1
answer
Filter MACS peaks by enrichment/FDR?
macs peaks next-gen chip-seq sequencing written 21 months ago by ggonzalezp0 • updated 21 months ago by YaGalbi1.4k
5
votes
4
answers
4.0k
views
5 follow
4
answers
Annotation of ChIP-seq peaks after MACS
macs chip-seq peak annotation written 22 months ago by dorota.komar10 • updated 22 months ago by meer.k.mustafa0
0
votes
1
answer
644
views
1
answer
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