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False output when intersecting methylation data
multiintersect intersect wgbs written 1 hour ago by theodore • 20
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votes
1
answer
122
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1
answer
Tutorial: Polish PacBio assembly with latest PacBio tools : an affordable solution for everyone
pbalign tutorial polishing pacbio arrow smrt limk written 3 days ago by Roxane Boyer • 300 • updated 1 hour ago by bhagyathimmappa • 0
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51
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FuncTREE - How to create input file from KEEG KO data.....for create FuncTREE circular Plot
genome written 4 hours ago by insilicobrain • 20
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2
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2
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Challenge: Convert GenBank to Fasta without bioperl, without emboss, or any other dependencies
fasta file-format conversion genbank written 23 months ago by Lee Katz • 2.8k • updated 4 hours ago by Biostar ♦♦ 20
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103
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1
answer
(Closed) Biopython code change
sequence written 19 hours ago by Gravel • 0
3
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2
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183
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2
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how to compare 1st row and 1st column value with rest of the row values in R?
R written 1 day ago by blacktomato27 • 10
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66
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What is the best test to compare the expression of two different sets of genes in the same transcriptome?
gene R rna-seq written 6 hours ago by Pas • 20
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59
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SNP position in UTRs
snp written 8 hours ago by deepak.k.choubey • 10
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1
answer
229
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1
answer
News: BIOSG17 Workshop on High Throughput Computing in Bioinformatics/Biomedicine using OSG
news osg htc biomedicine bioinformatics workshop written 6 weeks ago by natasha.pavlovikj • 10
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Job: Bioinformaticist in Genomics Data Analysis, Washington University, St. Louis, MO, USA
R job written 10 hours ago by ldeberry • 10 • updated 9 hours ago by genomax ♦ 33k
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83
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(Closed) I HAVE A FASTA FILES BY THE WAY
alignment rna-seq written 10 hours ago by uirajan-kuki • 0 • updated 9 hours ago by genomax ♦ 33k
2
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1
answer
128
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1
answer
Strand specific and unstranded dataset
rna-seq written 8 days ago by lirongrossmann • 10
285
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15
answers
14k
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120 follow
15
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 9 months ago by Istvan Albert ♦♦ 73k
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4
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209
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5 follow
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Selecting genes that best separate between two groups
ttest feature selection limma filtering rna-seq written 5 days ago by lirongrossmann • 10
2
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1
answer
726
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1
answer
Bedtools intersect a position in a range
bedtools intersect written 2.3 years ago by christylynn002 • 0 • updated 10 hours ago by Biostar ♦♦ 20
2
votes
1
answer
78
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1
answer
match() function returning NA even when there is match
rna-seq written 12 hours ago by lech.kaczmarczyk • 10 • updated 10 hours ago by Kevin Blighe • 1.2k
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1
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100
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1
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BLAST2GO Interpro scan: invalid input, please check your input
interpro input error blast2go written 1 day ago by Kayleigh Maier • 0 • updated 11 hours ago by junya11235 • 0
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1
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68
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1
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PFM for CTCF in mm9 extremely difficult to find- or does one exist?
assembly written 13 hours ago by chrisclarkson100 • 50 • updated 12 hours ago by jared.andrews07 • 90
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4
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625
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4
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trinitry Virusfinder error message no contigs
virus written 12 months ago by cristina_sabiers • 40 • updated 14 hours ago by fx32 • 0
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0
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59
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0
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help with STACKS software!
radseq written 14 hours ago by Betrobert • 0
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83
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0
answers
samtools mpileup error
software error assembly next-gen sequence written 16 hours ago by teresayahu • 0
2
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1
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169
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1
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Meaning of 'tag' in the context of variants
interpretation variant written 6 weeks ago by andrewl • 10 • updated 16 hours ago by Dan Gaston ♦ 6.8k
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79
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Error converting sam to bam
genome written 16 hours ago by valopes • 0 • updated 16 hours ago by genomax ♦ 33k
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76
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Validating SNP calls quality
snp written 17 hours ago by jomare1188 • 0
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1
answer
138
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1
answer
Extracting chimeric reads from mapping
alignment samtools rna-seq bwa written 17 hours ago by Anushka • 20 • updated 16 hours ago by Pierre Lindenbaum ♦ 98k
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84
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COSMIC paired normal cell lines for somatic mutation calling
dna-sequencing cosmic somatic mutation written 18 hours ago by liu4gre • 100 • updated 18 hours ago by genomax ♦ 33k
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95
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gene prediction in diabetes type II
gene rna-seq written 18 hours ago by holynafas • 0
1
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91
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Biclustering on RNA-seq data
rna-seq written 18 hours ago by ankushmaind • 10
1
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1
answer
187
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1
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MAKER annotation post processing (AED score)
aed maker written 9 weeks ago by Picasa • 310 • updated 19 hours ago by dfajar2 • 10
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1
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100
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1
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How can I Find modules of a gene?
plants rna-seq modules written 20 hours ago by hodatn • 0 • updated 19 hours ago by jrj.healey • 2.4k
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