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Showing: normalisation • reset
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<prev • 21 results • page 1 of 1 • next >
8
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3
answers
5.8k
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3
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Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
paired-end chip-seq normalisation written 4.2 years ago by James Ashmore • 2.6k • updated 10 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
119
views
1
answer
Highly uneven RINs, mapping rates, and methods to deal with this (normalisation, salmon)
salmon rna-seq normalisation written 11 weeks ago by chris86 • 250
5
votes
1
answer
247
views
1
answer
What batch correction was applied to pan-Cancer mRNA expression data?
mrna pan-cancer atlas tcga normalisation written 3 months ago by user31888 • 40 • updated 3 months ago by i.sudbery ♦ 4.3k
0
votes
0
answers
139
views
0
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Difference between microarray normalisation methods
microarray normalisation written 5 months ago by masicioglu • 0
0
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0
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245
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0
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Normalisation of read mapping counts to account for contig length
otu metagenome normalisation read mapping written 9 months ago by valerie • 0
0
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0
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239
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0
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Use normalised reads for HISAT2/Braker1
gene prediction braker normalisation hisat2 written 11 months ago by ersgupta • 0
0
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0
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595
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0
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Normalisation of Microbiome Data for Beta Diversity Analysis
beta-diversity microbiome normalisation written 19 months ago by qwrissie • 0 • updated 18 months ago by Biostar ♦♦ 20
0
votes
1
answer
621
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1
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How does differences in library size infuences ChIP-Seq experiments?
chip-seq library normalisation written 22 months ago by Assa Yeroslaviz • 1.2k • updated 22 months ago by Istvan Albert ♦♦ 80k
1
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0
answers
471
views
0
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SingleCell RNaseq normalisation
singlecell rnaseq normalisation spike_in written 22 months ago by nadia_boufaied • 10
1
vote
1
answer
720
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1
answer
IGB normalisation of reads
rnaseq next-gen igb normalisation rna-seq written 2.1 years ago by shimbalama • 0 • updated 2.1 years ago by Mason Meyer • 110
1
vote
1
answer
638
views
1
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Normalisation of arrays with global changes expected
microarray normalisation limma written 2.2 years ago by i.sudbery ♦ 4.3k • updated 2.2 years ago by patrick.bradley • 30
11
votes
1
answer
1.4k
views
1
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RNA-Seq data: The "right" normalisation and unit for the job
units rna-seq normalisation written 2.5 years ago by Sirio • 30 • updated 2.5 years ago by Devon Ryan ♦ 89k
0
votes
0
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1.3k
views
0
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Removing GC content bias and trended bias from ChIP-seq data
csaw chip-seq edger cqn normalisation written 2.5 years ago by James Ashmore • 2.6k
5
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2
answers
2.2k
views
2
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Quantile normalisation: raw rpkm or log2rpkm?
rnaseq quantile normalisation written 2.5 years ago by YaGalbi • 1.4k • updated 2.5 years ago by Michael Dondrup ♦ 46k
0
votes
1
answer
760
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1
answer
normalisation method for microarray
methods microarray normalisation written 3.2 years ago by raya.girish • 20
2
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1
answer
1.0k
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1
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Filtering samples or not before normalisation for samples from several groups
filter gene expression microarray normalisation written 3.3 years ago by Zhilong Jia • 1.4k • updated 3.3 years ago by Devon Ryan ♦ 89k
0
votes
1
answer
985
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1
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how to normalise Sangar ab1 raw trace data?
sangar base calling ab1 normalisation sequencing written 3.5 years ago by crivenster • 50 • updated 3.5 years ago by h.mon ♦ 24k
2
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0
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1.8k
views
0
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QuasiSeq vs. DESeq2 results
deseq2 quasiseq erccdashboard normalisation written 3.9 years ago by Assa Yeroslaviz • 1.2k • updated 3.8 years ago by Biostar ♦♦ 20
0
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0
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1.7k
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0
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DESeq2 - Normalisation factors
deseq2 rna-seq normalisation written 4.1 years ago by alesssia • 510
1
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2
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2.5k
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2
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RNA-Seq comparing transcript levels between samples and between experimental runs. How to design an experiment to be able to do this?
cross-sample rna-seq normalisation sequencing written 4.3 years ago by ncl.wong • 0 • updated 4.3 years ago by Devon Ryan ♦ 89k
5
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1
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4.7k
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6 follow
1
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EdgeR TMM normalisation
rpkm tmm normalisation rna-seq edger written 5.0 years ago by AW • 350 • updated 5.0 years ago by Devon Ryan ♦ 89k
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