Showing: peaksreset
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20
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9.0k
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ATAC-seq peak calling with MACS
macs peaks chip-seq atac-seq written 16 months ago by igor5.0k • updated 6 weeks ago by Biostar ♦♦ 20
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186
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251
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0
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4
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367
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6 follow
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ChIP-Seq identification of peaks
histone modification peaks chip-seq written 4 months ago by TulsaPrim0 • updated 4 months ago by mforde841.1k
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1
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362
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1
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0
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557
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305
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Find the highest value in an interval defined in an other file
R peaks written 9 months ago by maude0 • updated 8 months ago by Rashedul Islam190
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528
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0
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2
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1
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526
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1
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Filter MACS peaks by enrichment/FDR?
macs peaks next-gen chip-seq sequencing written 8 months ago by ggonzalezp0 • updated 8 months ago by kennethcondon20071.0k
1
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2
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372
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6 follow
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compare peaks in a gene list (coordinates)
gene bed peaks chip-seq written 9 months ago by Lila M 370 • updated 9 months ago by vchris_ngs4.2k
1
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1
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260
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1
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Selecting relevant binding sites according to MACS data
macs peaks analysis written 10 months ago by robbenstijn0 • updated 9 months ago by le233660
3
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1
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355
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1
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Define unique intervals from a set of peaks
overlapping regions peaks uniq intervals written 11 months ago by fusion.slope130 • updated 11 months ago by Alex Reynolds22k
4
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1
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531
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1
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FAIRE-seq - actively maintained peak-callers
faire-seq peaks chip-seq written 11 months ago by Maciej JoŇĄczyk590 • updated 11 months ago by EagleEye4.9k
3
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1
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459
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1
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Filtering bed file
bed peaks written 13 months ago by ####150 • updated 13 months ago by berge201570
10
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5
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884
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5
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How to visualize selected few ChIPseq peaks
macs2 peaks chip-seq written 15 months ago by Mike880 • updated 15 months ago by dariober8.4k
1
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2
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1.3k
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2
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How to select top significant ChiPseq peaks from MACS2 output file
macs2 peaks chip-seq written 15 months ago by Mike880 • updated 15 months ago by dariober8.4k
0
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487
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0
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2
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1
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825
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1
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Identify Target genes of an enhancer
enhancer peaks written 18 months ago by Bioinformatist Newbie210 • updated 16 months ago by Giovanni M Dall'Olio25k
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3
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993
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3
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1
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1
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523
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1
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1
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2
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993
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Threshold for calling DNAse-seq peaks ON or OFF
cutoff peaks dnase-seq roadmap written 21 months ago by Bioinformatist Newbie210 • updated 21 months ago by Alex Reynolds22k
1
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0
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571
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0
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1
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1
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735
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Chipseq peak data download
chipseq peaks written 2.1 years ago by kanwarjag840 • updated 2.1 years ago by Emily_Ensembl14k
4
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1
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771
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1
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Plot of intergenomic distances between all bound TF sites?
peaks chip-seq written 2.2 years ago by bede.portz450 • updated 2.2 years ago by Alex Reynolds22k
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1.3k
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11
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7.4k
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9
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3
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5.0k
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How do I view the height / distribution of ChIP-seq peaks?
peaks chip-seq visualisation written 3.0 years ago by James Ashmore2.3k • updated 3.0 years ago by Fidel1.8k
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macs and bedtools
bedtools macs peaks written 3.5 years ago by marina-orlova60 • updated 3.5 years ago by Ming Tang2.2k
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