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No coverage in macs2 peak summit!
macs2 peaks written 11 weeks ago by blur180 • updated 5 weeks ago by Biostar ♦♦ 20
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Calculate correlations between ChipSeq data sets
peaks chipseq macs2 correlation bedgraph written 11 months ago by Assa Yeroslaviz1.4k • updated 11 months ago by Rory Stark920
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Get MACs2 peaks associated with specific genes
macs2 peaks atac-seq written 13 months ago by ahmed.saadawi0 • updated 13 months ago by Biostar ♦♦ 20
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fastqc of chipseq dataset - two peaks in GC content
gc content peaks chip-seq fastqc written 23 months ago by Assa Yeroslaviz1.4k • updated 22 months ago by Biostar ♦♦ 20
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create a RC matrix with narrowPeak data
peaks chip-seq rcmatrix written 2.6 years ago by chavezfigueredo.alejandra0 • updated 2.6 years ago by Rory Stark920
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How to correlate chip seq peaks?
pearson peaks correlation chip seq spearman written 2.6 years ago by Zee_S60 • updated 2.6 years ago by Rory Stark920
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ATAC-seq macs2 peak calling bampe mode extension shift
macs peaks chip-seq atac-seq written 2.7 years ago by nanoide60 • updated 2.7 years ago by Ricardo A.90
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Peak calling using macs2?
macs2 chip-seq peaks peak-calling written 2.7 years ago by star270 • updated 2.7 years ago by Ram32k
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ATAC-seq peak calling with MACS
macs peaks chip-seq atac-seq written 4.5 years ago by igor12k • updated 2.8 years ago by ZheFrench310
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Bam to BigWig loss of data at MACS peaks (nothing in the BigWig why?)
chip-seq peaks bigwig bam written 2.9 years ago by contreras.xavier0 • updated 2.9 years ago by GenoMax96k
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ChIP-Seq identification of peaks
histone modification peaks chip-seq written 3.5 years ago by TulsaPrim0 • updated 3.5 years ago by mforde841.3k
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MACS2 - centering peaks
macs2 peaks chip-seq centering written 3.7 years ago by YaGalbi1.5k
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Find the highest value in an interval defined in an other file
R peaks written 3.9 years ago by maude0 • updated 3.8 years ago by Rashedul Islam390
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Filter MACS peaks by enrichment/FDR?
macs peaks next-gen chip-seq sequencing written 3.8 years ago by ggonzalezp10 • updated 3.8 years ago by YaGalbi1.5k
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compare peaks in a gene list (coordinates)
gene bed peaks chip-seq written 3.9 years ago by Lila M 880 • updated 3.9 years ago by ivivek_ngs5.1k
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Selecting relevant binding sites according to MACS data
macs peaks analysis written 4.0 years ago by robbenstijn0 • updated 3.9 years ago by le233670
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Define unique intervals from a set of peaks
overlapping regions peaks uniq intervals written 4.0 years ago by fusion.slope240 • updated 4.0 years ago by Alex Reynolds31k
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FAIRE-seq - actively maintained peak-callers
faire-seq peaks chip-seq written 4.1 years ago by boczniak767700 • updated 4.1 years ago by EagleEye6.8k
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Filtering bed file
bed peaks written 4.2 years ago by ####210 • updated 4.2 years ago by berge201590
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