Showing: peaksreset
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create a RC matrix with narrowPeak data
peaks chip-seq rcmatrix written 8 months ago by chavezfigueredo.alejandra0 • updated 8 months ago by Rory Stark500
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342
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How to correlate chip seq peaks?
pearson peaks correlation chip seq spearman written 8 months ago by Zee_S20 • updated 8 months ago by Rory Stark500
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ATAC-seq macs2 peak calling bampe mode extension shift
macs peaks chip-seq atac-seq written 9 months ago by nanoide30 • updated 9 months ago by Ricardo A.90
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830
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8 follow
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Peak calling using macs2?
macs2 chip-seq peaks peak-calling written 9 months ago by star130 • updated 9 months ago by RamRS20k
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ATAC-seq peak calling with MACS
macs peaks chip-seq atac-seq written 2.6 years ago by igor7.4k • updated 10 months ago by ZheFrench210
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346
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Bam to BigWig loss of data at MACS peaks (nothing in the BigWig why?)
chip-seq peaks bigwig bam written 11 months ago by contreras.xavier0 • updated 11 months ago by genomax64k
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ChIP-Seq identification of peaks
histone modification peaks chip-seq written 19 months ago by TulsaPrim0 • updated 19 months ago by mforde841.2k
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MACS2 - centering peaks
macs2 peaks chip-seq centering written 21 months ago by YaGalbi1.4k
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Find the highest value in an interval defined in an other file
R peaks written 24 months ago by maude0 • updated 22 months ago by Rashedul Islam290
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Filter MACS peaks by enrichment/FDR?
macs peaks next-gen chip-seq sequencing written 22 months ago by ggonzalezp0 • updated 22 months ago by YaGalbi1.4k
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compare peaks in a gene list (coordinates)
gene bed peaks chip-seq written 23 months ago by Lila M 460 • updated 23 months ago by ivivek_ngs4.7k
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557
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Selecting relevant binding sites according to MACS data
macs peaks analysis written 2.1 years ago by robbenstijn0 • updated 24 months ago by le233660
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Define unique intervals from a set of peaks
overlapping regions peaks uniq intervals written 2.1 years ago by fusion.slope200 • updated 2.1 years ago by Alex Reynolds27k
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FAIRE-seq - actively maintained peak-callers
faire-seq peaks chip-seq written 2.1 years ago by boczniak767630 • updated 2.1 years ago by EagleEye6.2k
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Filtering bed file
bed peaks written 2.3 years ago by ####180 • updated 2.3 years ago by berge201580
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How to visualize selected few ChIPseq peaks
macs2 peaks chip-seq written 2.4 years ago by Mike1.2k • updated 2.4 years ago by dariober9.9k
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How to select top significant ChiPseq peaks from MACS2 output file
macs2 peaks chip-seq written 2.5 years ago by Mike1.2k • updated 2.5 years ago by dariober9.9k
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Identify Target genes of an enhancer
enhancer peaks written 2.7 years ago by Bioinformatist Newbie230 • updated 2.6 years ago by Giovanni M Dall'Olio26k
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Threshold for calling DNAse-seq peaks ON or OFF
cutoff peaks dnase-seq roadmap written 3.0 years ago by Bioinformatist Newbie230 • updated 3.0 years ago by Alex Reynolds27k
1
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827
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