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<prev • 53 results • page 1 of 2 • next >
4
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Hapmap 3 in hg19/GRCh37 plink format PED and MAP
hapmap 3 hg18 map ped hg19 written 25 days ago by Shicheng Guo • 4.7k
1
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1
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5.4k
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1
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Remove Duplicate Individuals From Plink Ped File Using Plink
gwas plink ped genotype written 4.3 years ago by venkateshr89 • 680 • updated 6 weeks ago by Vale • 0
2
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1
answer
696
views
1
answer
Using snpStats to read a pedfile, object 'm' not found
R plink ped written 17 months ago by nadrianam • 30 • updated 8 weeks ago by Kevin Blighe ♦ 17k
1
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1
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1.5k
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1
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Reading a .ped file in R?
R plink ped written 17 months ago by nadrianam • 30 • updated 8 weeks ago by fatmasayed93 • 0
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1
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199
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1
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How unphased VCF is converted into ped file?
vcf ddrad phaseing freebayes ped written 12 weeks ago by jingjin2203 • 0 • updated 12 weeks ago by Kevin Blighe ♦ 17k
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1
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364
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1
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PLINK2 recode ped flag issue
vcf plink2 plink ped written 6 months ago by emyli • 0 • updated 6 months ago by tarek.mohamed • 130
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352
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Is it possible to convert back to .ped from .raw (made with plink)?
R raw plink ped written 7 months ago by meri.kaustio • 0
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1
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371
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1
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illumina genotype reports _lgen to ped using plink
ped lgen illumina genotype report plink written 7 months ago by tarek.mohamed • 130 • updated 7 months ago by chrchang523 ♦ 3.1k
1
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1
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721
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1
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Fail to open file in plink
ped open file written 8 months ago by janhuang.cn • 70 • updated 8 months ago by Ram ♦ 14k
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402
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How to compare genotype calls of the SNPS on chrom X for the GWAS samples between plink file vs Affymetrix genotype output file?
gwas affymetrix plink ped genotype written 9 months ago by bioinforesearchquestions • 120 • updated 9 months ago by Biostar ♦♦ 20
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3
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5.8k
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3
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Vcftools Can'T Create Ped Map File Due To Ulimit Of Allowed Open Files.
vcf vcftools ped plink written 5.9 years ago by Kevin • 590 • updated 13 months ago by a.molkenov • 0
1
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1
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583
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Is there a way to tell PLINK and VCFtools to sort the samples in a particular order?
bed vcftools plink ped sort written 15 months ago by beausoleilmo • 160 • updated 15 months ago by chrchang523 ♦ 3.1k
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451
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1
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Latest release of '1000 genomes data'
vcf 1000 genomes data map ped written 15 months ago by tesfadej2003 • 10
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1
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938
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1
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plink PED file - randomly select allele at heterozygous site and convert to homozygous
ped adna plink snp genotype written 2.2 years ago by stolarek.ir • 550 • updated 16 months ago by zf1992lss • 0
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1.8k
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How to convert txt file to ped and map using plink
map plink ped txt written 16 months ago by BlackHole • 0
0
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0
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574
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0
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Question: Error converting MAP/PED to GEN in Gtools
gen gtools map ped written 18 months ago by sultan.chaudhury • 0
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803
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Compare genotypes from sequencing (vcf) and microarrays (ped)
vcf snp ped sequencing written 20 months ago by w0nderingatwork • 40
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1
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1.3k
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1
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how to add pedigree info into VCF
vcf pedigree ped written 2.1 years ago by CrazyB • 180 • updated 2.1 years ago by Ram ♦ 14k
3
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1
answer
709
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1
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convert plink to weka
weka plink ped map written 2.2 years ago by marwa.cs91 • 20
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1
answer
955
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1
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Can PLINK handle gzipped ped / map files?
plink ped written 2.3 years ago by Juan Manuel Berros • 70 • updated 2.3 years ago by chrchang523 ♦ 3.1k
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1
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1.0k
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1
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How to handle missing values using Expectation Maximization
expectation maximization plink ped map written 2.3 years ago by marwa.cs91 • 20 • updated 2.3 years ago by Jean-Karim Heriche ♦ 15k
2
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1
answer
1.4k
views
1
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Pedigree file information
pedigree plink ped .ped written 2.5 years ago by Mani • 20 • updated 2.5 years ago by Pierre Lindenbaum ♦ 106k
4
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3
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7.1k
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5 follow
3
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Converting Tped To Ped
plink ped written 4.5 years ago by Click downvote • 600 • updated 2.5 years ago by Simo • 30
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0
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1.4k
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Calculate Allele Frequency from PLINK PED/MAP files
allele frequency snp plink ped map written 2.5 years ago by shahil229.sa • 0
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1.0k
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Understanding AWClust's SNP file data format and converting a PED file to it
snp allele plink ped written 2.7 years ago by aritra90 • 20 • updated 2.7 years ago by Biostar ♦♦ 20
1
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1
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2.1k
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1
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PED & MAP file extension
plink ped map written 3.0 years ago by Rakan • 0 • updated 2.8 years ago by Fabio Marroni • 1.8k
0
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0
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1.0k
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Merge VCF files from different individuals
vcf merge ped written 2.9 years ago by jmmonroykuhn • 20
0
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808
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ped to HGDP format conversion
hgdp ped written 2.9 years ago by eyb • 130
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2
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1.7k
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2
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Using EPACTS to implement SKAT-O - question about ped files
skat ped epacts written 3.3 years ago by Vincent Laufer • 880 • updated 3.0 years ago by dheeraj.bobbili • 10
0
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1
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1.4k
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1
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defining reference alleles in 23andMe file to create plink .ped file
snp ped plink written 3.0 years ago by gulcek • 10 • updated 3.0 years ago by chrchang523 ♦ 3.1k
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