Showing: rnaseqreset
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DEG and low counts
rnaseq deseq2 ma plot low-counts written 1 hour ago by NielQC10
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fastqc acceptable file
rnaseq fastqc written 7 days ago by Morris_Chair90
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StringTie strandness of library in dUTP protocol
rnaseq libraryprep stringtie dutp written 11 days ago by raquelgarza9540 • updated 10 days ago by Juke-342.1k
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Differential expression of all genes vs only annotated genes
rnaseq deseq2 rna-seq written 15 days ago by transcripto0 • updated 15 days ago by h.mon24k
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error in prepare annotation script DEXseq
dexseq rnaseq ensamble gencode deu written 12 weeks ago by Lila M 470 • updated 18 days ago by vida.t0
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Error upon running HTseq with paired end aligned BAM (coordinate sorted) files
htseq rnaseq written 7 weeks ago by bnayer260 • updated 7 weeks ago by h.mon24k
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SNP calling using samtools
rnaseq samtools bcftools snp mpileup written 3 months ago by ankit hinsu10 • updated 12 weeks ago by Biostar ♦♦ 20
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Problem in running STAR
rnaseq star written 3 months ago by majeedaasim30
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News: BETA Testing Opportunity for new RNA-seq data analysis tool
news ngs beta omics multi-omics rnaseq written 3 months ago by polina990 • updated 3 months ago by WouterDeCoster38k
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Trimmomatic confirmation, multiple indeces per sample?!
trimmomatic rnaseq trimming written 4 months ago by T_1830 • updated 4 months ago by finswimmer11k
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WGCNA threshold values
rnaseq wgcna threshold clustering written 4 months ago by priyankaraina1010 • updated 4 months ago by Kevin Blighe41k
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STAR alignment error: quantmod not found
rnaseq alignment star written 4 months ago by prabin.dm30 • updated 4 months ago by Devon Ryan89k
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Tutorial: retrieve full TCGA datasets from cBioportal with R
data_retrieval tutorial tcga R cbioportal rnaseq written 2.5 years ago by TriS3.7k • updated 5 months ago by akshayb0420
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comparing two ratios in RNASeq data
rnaseq deseq2 written 5 months ago by mike60 • updated 5 months ago by Martombo2.4k
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CIGAR and sequence length are inconsistent after HISAT alignment
rnaseq hisat alignment written 5 months ago by DVA510 • updated 5 months ago by Devon Ryan89k
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Sequenced sample twice, can I merge the fastqs to analyze?
rnaseq fastq written 6 months ago by Pin.Bioinf240 • updated 6 months ago by geek_y9.4k
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