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No rule keywords allowed after run in snakefile
run python snakemake written 6 days ago by Assa Yeroslaviz1.3k • updated 6 days ago by Thibault D.690
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Snakemake - generate an unkown file in input
R snakemake written 13 days ago by regue.hadrien20 • updated 13 days ago by russhh5.1k
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BWA MEM using snakemake
snakemake bwa written 22 days ago by User000280
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Rscript use with snakemake - The rule is not executed
R snakemake written 23 days ago by regue.hadrien20 • updated 23 days ago by Devon Ryan94k
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Snakemake: Missing output files:
snakemake written 7 weeks ago by Jiji0 • updated 7 weeks ago by karolismatjosaitis30
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Finding depth of genes
samtools snakemake prokka depth written 3 months ago by Hansen_86920 • updated 8 weeks ago by Biostar ♦♦ 20
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If/else statement in Snakemake rule
snakemake if written 3 months ago by schroder.julia0 • updated 3 months ago by Thibault D.690
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Use of if-else statement in snakemake rule
if-else python snakemake written 2.6 years ago by Jokhe110 • updated 3 months ago by schroder.julia0
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Seeking help with snakemake
snakemake written 3 months ago by Ming40
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Running python script in Snakemake without input/output
snakemake written 3 months ago by Hansen_86920 • updated 3 months ago by Eric Lim1.6k
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snakemake and Star aligner code issue
snakemake written 5 months ago by lawrence.hsu10 • updated 5 months ago by letlovelead13130
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Snakemake FastQC MissingOutputFiles ErrorM
snakemake fastqc written 5 months ago by lasejourny10 • updated 5 months ago by bari.ballew210
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Snakemake input and wildcards
python snakemake written 5 months ago by Rox1.1k • updated 5 months ago by Thibault D.690
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missingoutputexception, snakemake after completing 95% analysis
snakemake rna-seq fastqc written 7 months ago by arshil0 • updated 5 months ago by Biostar ♦♦ 20
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Forum: Snakemake vs. Nextflow: strengths and weaknesses
forum snakemake nextflow written 2.7 years ago by ropolocan640 • updated 6 months ago by Shicheng Guo8.0k
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Snakemake: output folder a as dependency to a different rule
snakemake rna-seq written 6 months ago by Veewhy10 • updated 6 months ago by gb1.5k
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54 follow
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