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written 13 months ago by
934963534 • 10
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13 months ago by
Istvan Albert ♦♦ 80k
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written 4.2 years ago by
Daniel Standage ♦ 3.8k
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Devon Ryan ♦ 89k
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written 5.0 years ago by
Brett Kennedy • 50
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5.0 years ago by
Istvan Albert ♦♦ 80k
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Recent Replies
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C: Identify jumbled transcripts (scrambled exons) using HISAT2, stringtie, and GFFc by
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Are your individual reads long enough that they will span these shuffled exons and also give you ...
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Okay, that makes sense. But what about the downstream pipeline after minimap2? Was I right in a...
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If you have PacBio data why are you using HISAT2? A proper long read aligner (that can not only a...
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What's your R version? Also, these are just warnings and can be ignored unless you encounter prob...
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Is that result (no reads aligning in a sample) supported by adequate biological replicates? If yo...
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You should follow the statistical cutoff used for your analysis along with perhaps a fold change ...
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Following up in case someone has this question, I ended up using HOMER's annotatePeaks.pl. It was...
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Great, if you ever figure out exactly what it was, please do post up :) BTW, once a post has ans...
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VCF specification https://samtools.github.io/hts-specs/VCFv4.2.pdf . section 1.4.2 "genotype fields"
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Hello tpaisie! We believe that this post does not fit the main topic of this site. Fixed probl...
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