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Comment: C: get gene ids running sleuth kallisto for differential gene expression
updated 5.4 years ago by 45k • written 9.6 years ago by ▴ 50
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6
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4.4k
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get gene ids running sleuth kallisto for differential gene expression
kallisto sleuth RNA-seq
updated 5.4 years ago by ▴ 20 • written 9.6 years ago by ▴ 50
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7.5k
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Comment: A: Merge TPM for transcripts to genes Kallisto
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 50
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0
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7.5k
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Comment: A: Merge TPM for transcripts to genes Kallisto
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 50
0
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1
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1.2k
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test if clustering differs
permutation test clustering r heatmap RNA-seq
updated 7.4 years ago by 89k • written 7.4 years ago by ▴ 50
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1
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1.6k
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Cytoscape color code according to own annotations
cytoscape enrichment string network
updated 7.4 years ago by 27k • written 7.4 years ago by ▴ 50
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0
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1.9k
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Comment: C: Find mutation rates for a set of genes
8.3 years ago by frida.danielsson ▴ 50
0
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2
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1.9k
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Find mutation rates for a set of genes
cancer mutations cBioportal TCGA
updated 8.3 years ago by ★ 3.2k • written 8.3 years ago by ▴ 50
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0
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5.8k
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Comment: C: Looking For Frequncies Of Mutations In Set Of Genes In Different Cancers
8.3 years ago by frida.danielsson ▴ 50
0
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0
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1.4k
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no-discordant option in tophat
tophat alignment RNA-Seq
updated 9.3 years ago by 20 • written 9.4 years ago by ▴ 50
4
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6
replies
5.9k
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differential gene expression using sleuth
RNA-Seq sleuth kallisto
updated 9.5 years ago by ▴ 170 • written 9.5 years ago by ▴ 50
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5.9k
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Comment: C: differential gene expression using sleuth
9.5 years ago by frida.danielsson ▴ 50
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5.9k
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Comment: C: differential gene expression using sleuth
9.5 years ago by frida.danielsson ▴ 50
0
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1
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4.4k
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Comment: C: get gene ids running sleuth kallisto for differential gene expression
9.6 years ago by frida.danielsson ▴ 50
1
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3
replies
3.5k
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How to perform a GSEA and visualize it the best way
GSEA ENSEMBL GENE ID
updated 9.6 years ago by 48k • written 9.6 years ago by ▴ 50
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0
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3.5k
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Comment: C: How to perform a GSEA and visualize it the best way
9.6 years ago by frida.danielsson ▴ 50
0
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0
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3.6k
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Comment: C: Kallisto vs Cufflinks
9.6 years ago by frida.danielsson ▴ 50
0
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3
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3.6k
views
Kallisto vs Cufflinks
RNA-Seq Kallisto FPKM Cufflinks
9.6 years ago by frida.danielsson ▴ 50
3
votes
5
replies
7.5k
views
Merge TPM for transcripts to genes Kallisto
TPM FPKM Kallisto RNA-Seq software-error
updated 3.2 years ago by 45k • written 9.8 years ago by ▴ 50
0
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0
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8.3k
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Comment: C: samtools idxstats versus samtools view command
10.1 years ago by frida.danielsson ▴ 50
7
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8
replies
8.3k
views
samtools idxstats versus samtools view command
bam RNA-Seq samtools
updated 2.6 years ago by • 0 • written 10.1 years ago by ▴ 50
0
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2
replies
8.3k
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Comment: Comment: samtools idxstats versus samtools view command
updated 3.1 years ago by 45k • written 10.1 years ago by ▴ 50
1
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1
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8.3k
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Comment: C: samtools idxstats versus samtools view command
10.1 years ago by frida.danielsson ▴ 50
0
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0
replies
3.8k
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Comment: Comment: Map human cell line RNA-seq data to virus
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 50
0
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0
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3.8k
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Answer: Answer: Map human cell line RNA-seq data to virus
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 50
4
votes
10
replies
3.8k
views
Map human cell line RNA-seq data to virus
virus Cancer RNA-Seq Large-T SV40
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 50
0
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0
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2.6k
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Comment: C: number of reads mapped
10.1 years ago by frida.danielsson ▴ 50
0
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3
replies
2.6k
views
number of reads mapped
RNA-Seq FPKM samtools
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 50
0
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1
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3.8k
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Comment: Comment: Map human cell line RNA-seq data to virus
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 50
0
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1
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3.8k
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Comment: Comment: Map human cell line RNA-seq data to virus
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 50
0
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1
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3.8k
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Comment: C: Map human cell line RNA-seq data to virus
10.2 years ago by frida.danielsson ▴ 50
4
votes
15
replies
8.5k
views
Cufflinks Output File Genes.Fpkm_Tracking Number Of Genes
rna cufflinks ensembl
updated 11.5 years ago by 11k • written 11.5 years ago by ▴ 50
0
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0
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8.5k
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Comment: C: Cufflinks Output File Genes.Fpkm_Tracking Number Of Genes
11.5 years ago by frida.danielsson ▴ 50
0
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1
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8.5k
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Comment: C: Cufflinks Output File Genes.Fpkm_Tracking Number Of Genes
11.5 years ago by frida.danielsson ▴ 50
0
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1
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8.5k
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Comment: C: Cufflinks Output File Genes.Fpkm_Tracking Number Of Genes
11.5 years ago by frida.danielsson ▴ 50
0
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1
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8.5k
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Comment: C: Cufflinks Output File Genes.Fpkm_Tracking Number Of Genes
11.5 years ago by frida.danielsson ▴ 50
0
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1
reply
8.5k
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Comment: C: Cufflinks Output File Genes.Fpkm_Tracking Number Of Genes
11.5 years ago by frida.danielsson ▴ 50
0
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0
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8.5k
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Comment: C: Cufflinks Output File Genes.Fpkm_Tracking Number Of Genes
11.5 years ago by frida.danielsson ▴ 50
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