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450
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Comment:
Comment: QC exclusion of A/T or G/C alleles to avoid strand issues
13 days ago by
_quantum_girl_
▴ 10
0
votes
2
replies
450
views
QC exclusion of A/T or G/C alleles to avoid strand issues
quality-control
SNV
QC
SNP
13 days ago by
_quantum_girl_
▴ 10
0
votes
0
replies
110
views
Databases with GoF (Gain of Function) annotations.
gof
lof
gain-of-function
23 days ago by
_quantum_girl_
▴ 10
0
votes
0
replies
364
views
Comment:
Comment: How to choose --hwe threshold?
12 weeks ago by
_quantum_girl_
▴ 10
0
votes
2
replies
364
views
How to choose --hwe threshold?
plink
hardy-weinberg
quality-control
qc
12 weeks ago by
_quantum_girl_
▴ 10
0
votes
1
reply
548
views
What do HAP A1 and HAP A2 mean in plink --freqx output?
plink
updated 6 months ago by
bk11
★ 2.4k • written 6 months ago by
_quantum_girl_
▴ 10
0
votes
0
replies
296
views
Regenie to get burden
Regenie
updated 6 months ago by
Ram
43k • written 6 months ago by
_quantum_girl_
▴ 10
5
votes
3
replies
510
views
Where to find info on VCF file format?
bcftools
vcf
updated 7 months ago by
Ram
43k • written 7 months ago by
_quantum_girl_
▴ 10
0
votes
1
reply
1.2k
views
Comment:
Comment: How to filter vcf file by MAF using bcftools?
7 months ago by
_quantum_girl_
▴ 10
2
votes
4
replies
1.2k
views
How to filter vcf file by MAF using bcftools?
bcftools
vcf
updated 7 months ago by
Ram
43k • written 7 months ago by
_quantum_girl_
▴ 10
3
votes
4
replies
546
views
Unable to build applet in DNAnexus, .jar file not found
dnanexus
applet
updated 7 months ago by
LChart
3.9k • written 7 months ago by
_quantum_girl_
▴ 10
3
votes
2
replies
516
views
How to retrieve LoF and missense variants in WES data?
bcftools
variants
plink
SNPs
updated 7 months ago by
luffy
▴ 110 • written 7 months ago by
_quantum_girl_
▴ 10
1
vote
1
reply
475
views
Any online course for learning how to use PLINK?
plink
updated 7 months ago by
bk11
★ 2.4k • written 7 months ago by
_quantum_girl_
▴ 10
3
votes
3
replies
711
views
How to find variants in a specific gene in a cohort of 500k+ individuals?
variants
plink
SNPs
CNV
updated 8 months ago by
Pierre Lindenbaum
161k • written 8 months ago by
_quantum_girl_
▴ 10
0
votes
0
replies
266
views
How to find commutation using plink?
commutation
plink
8 months ago by
_quantum_girl_
▴ 10
0
votes
0
replies
5.0k
views
Comment:
Comment: From Imputed Snps To Cnvs
10 months ago by
_quantum_girl_
▴ 10
0
votes
0
replies
281
views
Methylation (Illumina arrays or Whole-genome bisulfite sequencing WBS) and WGS datasets?
array
wgs
methylation
wbs
dna
11 months ago by
_quantum_girl_
▴ 10
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