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367
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Comment: Comment: how to make go term plot and kegg pathway plot using InterProScan output
11 weeks ago by analyst ▴ 70
0
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0
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306
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GSEA of sugarcane
GSEA
12 weeks ago by analyst ▴ 70
1
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1
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383
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how to make a circular plot of variants
circular plot
updated 3 months ago by 166k • written 3 months ago by ▴ 70
0
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1
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367
views
how to make go term plot and kegg pathway plot using InterProScan output
interproscan
11 weeks ago by analyst ▴ 70
0
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1
reply
922
views
Comment: Comment: finding gene sequence from WGS data
3 months ago by analyst ▴ 70
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0
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922
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Comment: Comment: finding gene sequence from WGS data
3 months ago by analyst ▴ 70
6
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6
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922
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finding gene sequence from WGS data
gene WGS
updated 3 months ago by 15k • written 3 months ago by ▴ 70
0
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0
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670
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Comment: Comment: bcftools not filtering snps
3 months ago by analyst ▴ 70
1
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1
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670
views
Comment: Comment: bcftools not filtering snps
3 months ago by analyst ▴ 70
3
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4
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670
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bcftools not filtering snps
bcftools
3 months ago by analyst ▴ 70
0
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0
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740
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Comment: Comment: assembly tool for plant data
4 months ago by analyst ▴ 70
4
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3
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740
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assembly tool for plant data
plant
4 months ago by analyst ▴ 70
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1
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1.2k
views
Comment: Comment: building snpeff database for plant
updated 4 months ago by 15k • written 4 months ago by ▴ 70
0
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0
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765
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Comment: Comment: variant calling chromosome-wise from WGS data
4 months ago by analyst ▴ 70
0
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0
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765
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Comment: Comment: variant calling chromosome-wise from WGS data
4 months ago by analyst ▴ 70
2
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4
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765
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variant calling chromosome-wise from WGS data
wgs
updated 4 months ago by 153k • written 4 months ago by ▴ 70
0
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1
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1.2k
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Comment: Comment: building snpeff database for plant
4 months ago by analyst ▴ 70
0
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1
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1.2k
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Comment: Comment: building snpeff database for plant
4 months ago by analyst ▴ 70
0
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1
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1.2k
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Comment: Comment: building snpeff database for plant
4 months ago by analyst ▴ 70
0
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1
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1.2k
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Comment: Comment: building snpeff database for plant
4 months ago by analyst ▴ 70
6
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10
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1.2k
views
building snpeff database for plant
plant
updated 4 months ago by 15k • written 4 months ago by ▴ 70
2
votes
1
reply
497
views
How to deal polyploid and aneuploid sugarcane genome R570 for variant calling
aneuploid
updated 4 months ago by ★ 3.1k • written 4 months ago by ▴ 70
0
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0
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573
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Comment: Comment: structural variation calling through delly is stuck at Split-read assembly step
6 months ago by analyst ▴ 70
0
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2
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573
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structural variation calling through delly is stuck at Split-read assembly step
short reads assembly
6 months ago by analyst ▴ 70
0
votes
1
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694
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Comment: Comment: low alignment rate for RNA-Seq data
6 months ago by analyst ▴ 70
1
vote
3
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694
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low alignment rate for RNA-Seq data
rice low alignment RNA-Seq
updated 6 months ago by 153k • written 6 months ago by ▴ 70
0
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0
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727
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Comment: Comment: filtering heterozygous genotypes
7 months ago by analyst ▴ 70
1
vote
2
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727
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filtering heterozygous genotypes
bcftools heterozygous
7 months ago by analyst ▴ 70
5
votes
2
replies
1.1k
views
java out of memory error through beagle for imputation
beagle imputation java
updated 7 months ago by 45k • written 16 months ago by ▴ 70
3
votes
1
reply
658
views
Abyss output scaffolds.fa file contains kmer sized scaffolds
scaffolds abyss
updated 7 months ago by 15k • written 8 months ago by ▴ 70
0
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0
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594
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Comment: Comment: Setting ploidy level in gatk
8 months ago by analyst ▴ 70
0
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0
replies
1.3k
views
Comment: Comment: constructing de novo assembly of plant short reads
8 months ago by analyst ▴ 70
2
votes
2
replies
594
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Setting ploidy level in gatk
ploidy
8 months ago by analyst ▴ 70
0
votes
0
replies
1.3k
views
Comment: Comment: constructing de novo assembly of plant short reads
8 months ago by analyst ▴ 70
0
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1
reply
1.3k
views
Comment: Comment: constructing de novo assembly of plant short reads
8 months ago by analyst ▴ 70
0
votes
0
replies
1.3k
views
Comment: Comment: constructing de novo assembly of plant short reads
8 months ago by analyst ▴ 70
0
votes
1
reply
1.3k
views
Comment: Comment: constructing de novo assembly of plant short reads
8 months ago by analyst ▴ 70
0
votes
1
reply
1.3k
views
Comment: Comment: constructing de novo assembly of plant short reads
8 months ago by analyst ▴ 70
5
votes
10
replies
1.3k
views
constructing de novo assembly of plant short reads
short reads assembly plants
8 months ago by analyst ▴ 70
0
votes
1
reply
770
views
making a circos for snps indels and SV
circos
updated 8 months ago by 6.5k • written 8 months ago by ▴ 70
0
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0
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450
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Process localizer (1) terminated with an error exit status (1) predector error
predector fungus
9 months ago by analyst ▴ 70
0
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0
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20k
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Comment: Comment: Convert .gbff (gene bank flat format) to gff3, gtf
9 months ago by analyst ▴ 70
0
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2
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1.4k
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Comment: Comment: Can we construct single pangenome for different crops
9 months ago by analyst ▴ 70
0
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1
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1.4k
views
Comment: Comment: Can we construct single pangenome for different crops
9 months ago by analyst ▴ 70
0
votes
1
reply
1.4k
views
Comment: Comment: Can we construct single pangenome for different crops
9 months ago by analyst ▴ 70
0
votes
1
reply
1.4k
views
Comment: Comment: Can we construct single pangenome for different crops
9 months ago by analyst ▴ 70
8
votes
9
replies
1.4k
views
Can we construct single pangenome for different crops
pangenome different crops
updated 9 months ago by ▴ 490 • written 9 months ago by ▴ 70
1
vote
2
replies
681
views
linear pangenome for crops
pangenome linear
updated 9 months ago by ▴ 20 • written 9 months ago by ▴ 70
0
votes
1
reply
884
views
Comment: Comment: predector exit status (137)
updated 9 months ago by 153k • written 9 months ago by ▴ 70
0
votes
1
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884
views
Comment: Comment: predector exit status (137)
9 months ago by analyst ▴ 70
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