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6
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5
replies
3.1k
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How to force bcftools to call all variants
calling bcftools mpileup variant call
updated 5 months ago by 134k • written 2.5 years ago by ▴ 140
1
vote
4
replies
1.2k
views
Variant calling from comparison of assembled genomes where there is only one read depth.
variant
updated 2.5 years ago by ▴ 500 • written 2.5 years ago by ▴ 140
0
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0
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1.2k
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Answer: Answer: Variant calling from comparison of assembled genomes where there is only one r
2.5 years ago by Hans ▴ 140
2
votes
1
reply
3.1k
views
Comment: Comment: How to force bcftools to call all variants
2.5 years ago by Hans ▴ 140
0
votes
0
replies
985
views
Comment: C: Dinucleodite variants are marked at single nucleotide variant in BCFTOOLS CALL
3.2 years ago by Hans ▴ 140
0
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1
reply
985
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Comment: C: Dinucleodite variants are marked at single nucleotide variant in BCFTOOLS CALL
updated 3.2 years ago by 86k • written 3.2 years ago by ▴ 140
0
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4
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985
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Dinucleodite variants are marked at single nucleotide variant in BCFTOOLS CALL
BCFtools Variant calling
3.2 years ago by Hans ▴ 140
0
votes
0
replies
2.5k
views
Comment: C: VCF file with refrence genome in Discosnp is epmty
updated 3.7 years ago by 40k • written 7.5 years ago by ▴ 140
0
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1
reply
2.2k
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Comment: C: DiscoSNP parameters for complex genomes with reads starting only at specific res
updated 3.8 years ago by 40k • written 7.8 years ago by ▴ 140
0
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0
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2.2k
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Comment: A: DiscoSNP parameters for complex genomes with reads starting only at specific res
updated 3.8 years ago by 40k • written 7.8 years ago by ▴ 140
1
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0
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3.6k
views
Comment: C: DiscoSnp Segmentation fault
updated 3.9 years ago by 40k • written 7.8 years ago by ▴ 140
0
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0
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3.6k
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Comment: A: DiscoSnp Segmentation fault
updated 3.9 years ago by 40k • written 7.9 years ago by ▴ 140
0
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0
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3.6k
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Comment: A: DiscoSnp Segmentation fault
updated 3.9 years ago by 40k • written 7.9 years ago by ▴ 140
0
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1
reply
3.6k
views
Comment: A: DiscoSnp Segmentation fault
updated 3.9 years ago by 40k • written 8.0 years ago by ▴ 140
0
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1
reply
3.6k
views
Comment: A: DiscoSnp Segmentation fault
updated 3.9 years ago by 40k • written 8.0 years ago by ▴ 140
0
votes
1
reply
3.6k
views
Comment: C: DiscoSnp Segmentation fault
updated 3.9 years ago by 40k • written 8.0 years ago by ▴ 140
0
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0
replies
4.5k
views
Comment: Comment: filtering and statistics of depth per genotype per SNP of VCF files (solved)
updated 18 months ago by 40k • written 8.7 years ago by ▴ 140
0
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0
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5.0k
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Comment: C: IGV does not show BAM file information
5.9 years ago by Hans ▴ 140
0
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1
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5.0k
views
Comment: C: IGV does not show BAM file information
5.9 years ago by Hans ▴ 140
1
vote
13
replies
5.0k
views
IGV does not show BAM file information
RNA-Seq next-gen igv bam
updated 5.9 years ago by ★ 2.9k • written 5.9 years ago by ▴ 140
0
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1
reply
5.0k
views
Comment: C: IGV does not show BAM file information
updated 5.9 years ago by 157k • written 5.9 years ago by ▴ 140
0
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1
reply
5.0k
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Comment: C: IGV does not show BAM file information
5.9 years ago by Hans ▴ 140
0
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1
reply
5.0k
views
Comment: C: IGV does not show BAM file information
updated 5.9 years ago by 134k • written 5.9 years ago by ▴ 140
0
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1
reply
5.0k
views
Comment: C: IGV does not show BAM file information
5.9 years ago by Hans ▴ 140
0
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0
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2.0k
views
Comment: C: Structural variation detection from RNA-seq
6.0 years ago by Hans ▴ 140
1
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8
replies
2.0k
views
Structural variation detection from RNA-seq
RNA-Seq Indel
updated 6.0 years ago by 5.5k • written 6.0 years ago by ▴ 140
0
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1
reply
2.0k
views
Comment: C: Structural variation detection from RNA-seq
6.0 years ago by Hans ▴ 140
0
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2
replies
2.0k
views
Comment: C: Structural variation detection from RNA-seq
6.0 years ago by Hans ▴ 140
0
votes
1
reply
2.4k
views
Comment: C: "Paired-end accessions do not match" error in gsnapl
7.1 years ago by Hans ▴ 140
0
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0
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2.4k
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Comment: C: "Paired-end accessions do not match" error in gsnapl
7.1 years ago by Hans ▴ 140
0
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1
reply
2.4k
views
Comment: C: "Paired-end accessions do not match" error in gsnapl
7.2 years ago by Hans ▴ 140
0
votes
5
replies
2.4k
views
"Paired-end accessions do not match" error in gsnapl
gsnapl
7.2 years ago by Hans ▴ 140
0
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0
replies
2.0k
views
Comment: C: gmap error: Length XXXX of quality score differs from length XXX of nucleotides
7.2 years ago by Hans ▴ 140
0
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1
reply
2.0k
views
Comment: C: gmap error: Length XXXX of quality score differs from length XXX of nucleotides
7.2 years ago by Hans ▴ 140
0
votes
4
replies
2.0k
views
gmap error: Length XXXX of quality score differs from length XXX of nucleotides in sequence
gmap
updated 7.2 years ago by 9.7k • written 7.2 years ago by ▴ 140
0
votes
0
replies
2.5k
views
Comment: C: VCF file with refrence genome in Discosnp is epmty
7.5 years ago by Hans ▴ 140
1
vote
8
replies
2.5k
views
VCF file with reference genome in Discosnp is empty
discosnp
updated 14 months ago by 40k • written 7.7 years ago by ▴ 140
0
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0
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2.5k
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Comment: C: VCF file with refrence genome in Discosnp is epmty
7.7 years ago by Hans ▴ 140
0
votes
1
reply
2.5k
views
Comment: C: VCF file with refrence genome in Discosnp is epmty
7.7 years ago by Hans ▴ 140
0
votes
5
replies
2.2k
views
DiscoSNP parameters for complex genomes with reads starting only at specific restriction sites
discosnp
updated 13 months ago by 40k • written 7.8 years ago by ▴ 140
5
votes
20
replies
3.6k
views
DiscoSnp Segmentation fault
snp discosnp
updated 12 months ago by 40k • written 8.1 years ago by ▴ 140
2
votes
0
replies
3.6k
views
Comment: Comment: DiscoSnp Segmentation fault
updated 12 months ago by 40k • written 8.1 years ago by ▴ 140
0
votes
1
reply
3.6k
views
Comment: Comment: DiscoSnp Segmentation fault
updated 12 months ago by 40k • written 8.1 years ago by ▴ 140
0
votes
0
replies
3.6k
views
Comment: Comment: DiscoSnp Segmentation fault
updated 12 months ago by 40k • written 8.1 years ago by ▴ 140
1
vote
1
reply
1.8k
views
Lositan does not run simulations and does not read the right number of loci
lositan
updated 16 months ago by 40k • written 8.5 years ago by ▴ 140
4
votes
0
replies
7.6k
views
Answer: A: RepeatMasker library out of date.
8.7 years ago by Hans ▴ 140
0
votes
4
replies
4.5k
views
filtering and statistics of depth per genotype per SNP of VCF files (solved)
SNP next-gen
updated 18 months ago by 40k • written 8.7 years ago by ▴ 140
0
votes
0
replies
4.5k
views
Comment: Comment: filtering and statistics of depth per genotype per SNP of VCF files (solved)
updated 18 months ago by 40k • written 8.7 years ago by ▴ 140
0
votes
0
replies
3.8k
views
Comment: Comment: converting sam to bam format samtools
updated 18 months ago by 40k • written 8.8 years ago by ▴ 140
3
votes
5
replies
3.8k
views
converting sam to bam format samtools
samtools sam bam
updated 18 months ago by 40k • written 8.8 years ago by ▴ 140
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