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3
votes
4
replies
5.6k
views
Trimmomatic output explanation
rna-seq RNA-Seq sequence
9.1 years ago by Mehmet ▴ 820
0
votes
0
replies
2.3k
views
Comment: C: Search a proteome file to blast database (command line usage)
9.1 years ago by Mehmet ▴ 820
0
votes
3
replies
2.3k
views
Search a proteome file to blast database (command line usage)
blast alignment sequence genome
9.1 years ago by Mehmet ▴ 820
1
vote
0
replies
1.8k
views
Phylogeny differences between gene and orthologs
genome gene next-gen
9.3 years ago by Mehmet ▴ 820
0
votes
0
replies
2.2k
views
Comment: C: protein identification in proteome file using bioinformatics tools
9.3 years ago by Mehmet ▴ 820
0
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1
reply
2.1k
views
Comment: C: Putative gene finding in a proteome file
9.3 years ago by Mehmet ▴ 820
0
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0
replies
2.1k
views
Comment: C: Putative gene finding in a proteome file
9.3 years ago by Mehmet ▴ 820
1
vote
5
replies
2.1k
views
Putative gene finding in a proteome file
RNA-Seq genome sequence gene
9.3 years ago by Mehmet ▴ 820
0
votes
0
replies
1.9k
views
Protein domain comparison in Pfam database by Hmmer (Again)
genome alignment RNA-Seq sequence
9.3 years ago by Mehmet ▴ 820
0
votes
1
reply
1.8k
views
Comment: C: Multiple Proteome comparision
9.4 years ago by Mehmet ▴ 820
0
votes
3
replies
1.8k
views
Multiple Proteome comparision
RNA-Seq genome sequencing rna-seq
updated 9.4 years ago by 9.3k • written 9.4 years ago by ▴ 820
0
votes
2
replies
3.0k
views
Comment: C: Phylogeny based on multiple sequences
9.7 years ago by Mehmet ▴ 820
0
votes
0
replies
2.7k
views
Comment: Comment: Cufflinks de novo assembly, single transcript per gene
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 820
1
vote
1
reply
1.7k
views
cufflinkGTF2augustusExonParthints.pl script
alignment next-gen RNA-Seq
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 820
0
votes
7
replies
3.9k
views
single copy genes for phylogenetic tree after orthomcl tool
genome alignment sequence
updated 9.7 years ago by ★ 1.9k • written 9.8 years ago by ▴ 820
0
votes
1
reply
6.1k
views
Comment: C: Augustus training and artemis
9.7 years ago by Mehmet ▴ 820
0
votes
0
replies
1.9k
views
Comment: C: Script error during orthologs analysis
9.7 years ago by Mehmet ▴ 820
0
votes
1
reply
1.6k
views
blast entry error
genome sequence blast alignment
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 820
0
votes
6
replies
1.9k
views
Script error during orthologs analysis
genome sequence software-error
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 820
0
votes
1
reply
1.9k
views
Comment: Comment: Script error during orthologs analysis
9.8 years ago by Mehmet ▴ 820
1
vote
6
replies
5.5k
views
phylogenetic tree after ortholog finding by orthoMCL
genome alignment sequence gene blast
9.8 years ago by Mehmet ▴ 820
0
votes
1
reply
5.5k
views
Answer: A: phylogenetic tree after ortholog finding by orthoMCL
9.8 years ago by Mehmet ▴ 820
0
votes
3
replies
2.3k
views
ortholog finding with unsequenced species
sequencing genome sequence
updated 3.3 years ago by 45k • written 9.9 years ago by ▴ 820
0
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0
replies
2.3k
views
Comment: C: ortholog finding with unsequenced species
9.9 years ago by Mehmet ▴ 820
0
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0
replies
4.4k
views
Comment: C: Trinity predicting more number of genes?
9.9 years ago by Mehmet ▴ 820
0
votes
1
reply
4.3k
views
Comment: C: Fasta header unique sequence
9.9 years ago by Mehmet ▴ 820
1
vote
7
replies
4.3k
views
Fasta header unique sequence
genome sequence
updated 3.3 years ago by 45k • written 9.9 years ago by ▴ 820
2
votes
1
reply
4.4k
views
Comment: C: Trinity predicting more number of genes?
9.9 years ago by Mehmet ▴ 820
1
vote
0
replies
4.1k
views
Answer: A: What Analysis after Denovo Assembly of RNA-seq of a species?
9.9 years ago by Mehmet ▴ 820
1
vote
3
replies
3.6k
views
how to find ortholog genes in assembled transcriptome and make phylogenetic tree with close taxonomic groups
RNA-Seq gene
updated 3.2 years ago by 45k • written 9.9 years ago by ▴ 820
0
votes
2
replies
2.1k
views
Removed contigs and genes from assembly by HaploMerger
genome gene sequencing Assembly alignment
updated 10.0 years ago by ▴ 10 • written 10.3 years ago by ▴ 820
1
vote
6
replies
3.9k
views
LASTZ aligner for HaploMerger
alignment Assembly genome sequence
updated 2.9 years ago by 45k • written 10.3 years ago by ▴ 820
1
vote
3
replies
2.5k
views
miRNA from RNAseq data (Transcriptome)
RNA-Seq next-gen sequence
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 820
0
votes
0
replies
2.1k
views
Comment: Comment: COMPARA ensembl gene family analysis
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
4
replies
2.1k
views
COMPARA ensembl gene family analysis
gene sequence genome alignment ensembl
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
0
replies
2.1k
views
Comment: Comment: COMPARA ensembl gene family analysis
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
0
replies
2.1k
views
Comment: Comment: Comparative genomics between model organism and non-model organism
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
0
replies
5.6k
views
Comment: Comment: getting "std::bad_alloc" message when using filterBam (augustus3.1)
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
1
reply
5.6k
views
Comment: Comment: getting "std::bad_alloc" message when using filterBam (augustus3.1)
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
0
replies
1.8k
views
Comment: Comment: finding orthologs in four genomes
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
2
replies
1.8k
views
finding orthologs in four genomes
Assembly genome gene
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
2
replies
5.6k
views
Comment: Comment: getting "std::bad_alloc" message when using filterBam (augustus3.1)
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
1
reply
5.6k
views
Comment: Comment: getting "std::bad_alloc" message when using filterBam (augustus3.1)
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
0
votes
1
reply
5.6k
views
Answer: Answer: getting "std::bad_alloc" message when using filterBam (augustus3.1)
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 820
1
vote
0
replies
4.4k
views
Answer: A: RepeatMasker on new species
10.2 years ago by Mehmet ▴ 820
0
votes
3
replies
2.5k
views
"Error: intron hint is too short" and "error in addgene "
next-gen genome gene
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 820
0
votes
1
reply
2.5k
views
Answer: Answer: "Error: intron hint is too short" and "error in addgene "
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 820
0
votes
0
replies
1.6k
views
help about HaploMerger
alignment Assembly genome sequence
updated 3.0 years ago by 45k • written 10.3 years ago by ▴ 820
0
votes
1
reply
3.9k
views
Comment: Comment: LASTZ aligner for HaploMerger
updated 3.0 years ago by 45k • written 10.3 years ago by ▴ 820
0
votes
1
reply
3.9k
views
Comment: Comment: LASTZ aligner for HaploMerger
updated 2.9 years ago by 45k • written 10.3 years ago by ▴ 820
379 results • Page 7 of 8
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