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comments
0
votes
1
reply
889
views
Comment:
Comment: Scan multiple sequences on multiple hmm profiles
11 months ago by
biobiu
▴ 150
0
votes
1
reply
889
views
Comment:
Comment: Scan multiple sequences on multiple hmm profiles
11 months ago by
biobiu
▴ 150
3
votes
4
replies
889
views
Scan multiple sequences on multiple hmm profiles
Hmm
hmmer
updated 11 months ago by
Mensur Dlakic
★ 26k • written 11 months ago by
biobiu
▴ 150
0
votes
0
replies
855
views
Comment:
Comment: Mutate genomes in silico
17 months ago by
biobiu
▴ 150
6
votes
5
replies
855
views
Mutate genomes in silico
genome
17 months ago by
biobiu
▴ 150
3
votes
2
replies
563
views
Upload database of a tool
software-development
updated 9 months ago by
Ram
43k • written 20 months ago by
biobiu
▴ 150
0
votes
0
replies
1.3k
views
Comment:
Comment: blast with multithreads is much slower
22 months ago by
biobiu
▴ 150
0
votes
1
reply
1.3k
views
Comment:
Comment: blast with multithreads is much slower
22 months ago by
biobiu
▴ 150
0
votes
5
replies
1.3k
views
blast with multithreads is much slower
blast
22 months ago by
biobiu
▴ 150
0
votes
0
replies
332
views
Do RefSeq viruses include prophages?
Prophages
refseq
24 months ago by
biobiu
▴ 150
0
votes
0
replies
344
views
Abundance calculation - taking into account genome size
relative-abundance
metagenomics
genome-size
2.1 years ago by
biobiu
▴ 150
0
votes
0
replies
393
views
Get all best hits- bowtie2
bowtie2
Alignment
2.3 years ago by
biobiu
▴ 150
1
vote
0
replies
750
views
Answer:
Answer: Stool miRNA - low alignment rate
2.4 years ago by
biobiu
▴ 150
0
votes
1
reply
2.4k
views
Comment:
Comment: Recommended mapper
2.4 years ago by
biobiu
▴ 150
0
votes
0
replies
2.4k
views
Comment:
Comment: Recommended mapper
2.4 years ago by
biobiu
▴ 150
1
vote
11
replies
2.4k
views
Recommended mapper
alignment
metagenomics
Mapping
updated 2.4 years ago by
Istvan Albert
100k • written 2.4 years ago by
biobiu
▴ 150
0
votes
0
replies
1.3k
views
Comment:
Comment: Basic annotation of refseq bacterial genomes
2.8 years ago by
biobiu
▴ 150
0
votes
0
replies
1.3k
views
Comment:
Comment: Basic annotation of refseq bacterial genomes
2.8 years ago by
biobiu
▴ 150
1
vote
7
replies
1.3k
views
Basic annotation of refseq bacterial genomes
annotation
bacteria
2.8 years ago by
biobiu
▴ 150
0
votes
2
replies
1.3k
views
Comment:
Comment: Basic annotation of refseq bacterial genomes
2.8 years ago by
biobiu
▴ 150
0
votes
0
replies
916
views
Answer:
Answer: CNVkit result interpretation
2.8 years ago by
biobiu
▴ 150
0
votes
0
replies
913
views
Comment:
Comment: basic pathways analysis - bacteria genome
2.9 years ago by
biobiu
▴ 150
0
votes
2
replies
913
views
basic pathways analysis - bacteria genome
microbial
pathway
2.9 years ago by
biobiu
▴ 150
0
votes
0
replies
1.0k
views
Comment:
Comment: Taxonomy assignment of viral RNA
3.0 years ago by
biobiu
▴ 150
1
vote
2
replies
1.0k
views
Taxonomy assignment of viral RNA
assembly
taxa
metagenomics
3.0 years ago by
biobiu
▴ 150
0
votes
0
replies
593
views
Predicting peptide binding site of a protein
peptide
3.2 years ago by
biobiu
▴ 150
0
votes
6
replies
4.0k
views
diamond blastp produce longer alignments with lower identity than ncbi blast
alignment
blastp
diamond
3.6 years ago by
biobiu
▴ 150
0
votes
0
replies
4.0k
views
Answer:
A: diamond blastp produce longer alignments with lower identity than ncbi blast
3.6 years ago by
biobiu
▴ 150
0
votes
0
replies
4.0k
views
Comment:
C: diamond blastp produce longer alignments with lower identity than ncbi blast
3.6 years ago by
biobiu
▴ 150
0
votes
0
replies
4.0k
views
Comment:
C: diamond blastp produce longer alignments with lower identity than ncbi blast
3.6 years ago by
biobiu
▴ 150
2
votes
6
replies
5.0k
views
calculating abundance of metagenomes
Assembly
alignment
updated 3.8 years ago by
colindaven
6.3k • written 4.7 years ago by
biobiu
▴ 150
0
votes
3
replies
1.6k
views
Panel of tumors for CNV detection
CNV
CNA
panel of normals
updated 4 months ago by
pedricolino
• 0 • written 5.1 years ago by
biobiu
▴ 150
0
votes
0
replies
2.1k
views
Comment:
A: Does mirna-seq is stranded?
updated 4.2 years ago by
Ram
43k • written 8.2 years ago by
biobiu
▴ 150
0
votes
1
reply
94k
views
Comment:
A: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.2 years ago by
Ram
43k • written 7.7 years ago by
biobiu
▴ 150
0
votes
1
reply
796
views
Categorizing prokka outputs
gene
4.4 years ago by
biobiu
▴ 150
0
votes
1
reply
1.2k
views
Comment:
C: Download EC number tree
4.4 years ago by
biobiu
▴ 150
2
votes
5
replies
1.2k
views
Download EC number tree
gene
updated 4.4 years ago by
GenoMax
140k • written 4.4 years ago by
biobiu
▴ 150
0
votes
0
replies
1.2k
views
Comment:
C: Download EC number tree
4.4 years ago by
biobiu
▴ 150
3
votes
8
replies
3.3k
views
metagenomics- read based diversity analysis
metagenomics
updated 4.4 years ago by
antonioggsousa
3.2k • written 4.6 years ago by
biobiu
▴ 150
0
votes
4
replies
12k
views
Diversity analysis after metaphlan2
metagenomics
updated 4.4 years ago by
evoBio
▴ 50 • written 4.6 years ago by
biobiu
▴ 150
0
votes
0
replies
5.6k
views
Comment:
C: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
4.6 years ago by
biobiu
▴ 150
1
vote
0
replies
5.6k
views
Comment:
A: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
4.6 years ago by
biobiu
▴ 150
0
votes
0
replies
687
views
Proportion of traits in several groups
propotion-test
fishers-exact-test
updated 10 months ago by
Ram
43k • written 4.6 years ago by
biobiu
▴ 150
1
vote
1
reply
10k
views
Answer:
A: Genome assembly statistical tools
4.6 years ago by
biobiu
▴ 150
0
votes
0
replies
1.7k
views
Answer:
A: Low value of mapped reads against a metagenomic co-assembly
4.6 years ago by
biobiu
▴ 150
0
votes
0
replies
5.0k
views
Comment:
C: calculating abundance of metagenomes
4.6 years ago by
biobiu
▴ 150
0
votes
0
replies
5.0k
views
Comment:
C: calculating abundance of metagenomes
4.7 years ago by
biobiu
▴ 150
1
vote
2
replies
886
views
Prediction of genes and functions without reference genome
assembly
updated 4.9 years ago by
proteina.cbe
• 0 • written 4.9 years ago by
biobiu
▴ 150
0
votes
1
reply
1.3k
views
Comment:
C: CNVkit- weird results when using the same sample as normal
5.0 years ago by
biobiu
▴ 150
1
vote
3
replies
1.3k
views
CNVkit- weird results when using the same sample as normal
cnv
updated 5.0 years ago by
Eric T.
★ 2.8k • written 5.0 years ago by
biobiu
▴ 150
70 results • Page
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