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Comment: Comment: Extracting unmapped reads from a sam file and converting to fastq
13 months ago by biobiu ▴ 150
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1
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795
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Comment: Comment: Chimeric reads analysis
13 months ago by biobiu ▴ 150
1
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3
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795
views
Chimeric reads analysis
NGS
updated 13 months ago by 22k • written 13 months ago by ▴ 150
0
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1
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1.1k
views
Comment: Comment: Construction of a phylogentic tree for thousands of bacterial genomes
14 months ago by biobiu ▴ 150
2
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4
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1.1k
views
Construction of a phylogentic tree for thousands of bacterial genomes
Phylogenomics
updated 14 months ago by ★ 29k • written 14 months ago by ▴ 150
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1
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2.0k
views
Comment: Comment: Scan multiple sequences on multiple hmm profiles
2.3 years ago by biobiu ▴ 150
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1
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2.0k
views
Comment: Comment: Scan multiple sequences on multiple hmm profiles
2.3 years ago by biobiu ▴ 150
3
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4
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2.0k
views
Scan multiple sequences on multiple hmm profiles
Hmm hmmer
updated 2.3 years ago by ★ 29k • written 2.3 years ago by ▴ 150
0
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0
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1.5k
views
Comment: Comment: Mutate genomes in silico
2.8 years ago by biobiu ▴ 150
6
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5
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1.5k
views
Mutate genomes in silico
genome
2.8 years ago by biobiu ▴ 150
3
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2
replies
846
views
Upload database of a tool
software-development
updated 2.2 years ago by 45k • written 3.1 years ago by ▴ 150
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0
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2.1k
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Comment: Comment: blast with multithreads is much slower
3.2 years ago by biobiu ▴ 150
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1
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2.1k
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Comment: Comment: blast with multithreads is much slower
3.2 years ago by biobiu ▴ 150
0
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5
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2.1k
views
blast with multithreads is much slower
blast
3.2 years ago by biobiu ▴ 150
0
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0
replies
510
views
Do RefSeq viruses include prophages?
Prophages refseq
3.4 years ago by biobiu ▴ 150
0
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0
replies
510
views
Abundance calculation - taking into account genome size
relative-abundance metagenomics genome-size
3.5 years ago by biobiu ▴ 150
0
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0
replies
554
views
Get all best hits- bowtie2
bowtie2 Alignment
3.7 years ago by biobiu ▴ 150
1
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0
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1.1k
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Answer: Answer: Stool miRNA - low alignment rate
3.8 years ago by biobiu ▴ 150
0
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1
reply
3.8k
views
Comment: Comment: Recommended mapper
3.8 years ago by biobiu ▴ 150
0
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0
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3.8k
views
Comment: Comment: Recommended mapper
3.8 years ago by biobiu ▴ 150
1
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11
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3.8k
views
Recommended mapper
alignment metagenomics Mapping
updated 3.8 years ago by 103k • written 3.8 years ago by ▴ 150
0
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0
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2.3k
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Comment: Comment: Basic annotation of refseq bacterial genomes
4.2 years ago by biobiu ▴ 150
0
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0
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2.3k
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Comment: Comment: Basic annotation of refseq bacterial genomes
4.2 years ago by biobiu ▴ 150
1
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7
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2.3k
views
Basic annotation of refseq bacterial genomes
annotation bacteria
4.2 years ago by biobiu ▴ 150
0
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2
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2.3k
views
Comment: Comment: Basic annotation of refseq bacterial genomes
4.2 years ago by biobiu ▴ 150
0
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0
replies
1.3k
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Answer: Answer: CNVkit result interpretation
4.2 years ago by biobiu ▴ 150
0
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0
replies
1.3k
views
Comment: Comment: basic pathways analysis - bacteria genome
4.3 years ago by biobiu ▴ 150
0
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2
replies
1.3k
views
basic pathways analysis - bacteria genome
microbial pathway
4.3 years ago by biobiu ▴ 150
0
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0
replies
1.3k
views
Comment: Comment: Taxonomy assignment of viral RNA
4.3 years ago by biobiu ▴ 150
1
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2
replies
1.3k
views
Taxonomy assignment of viral RNA
assembly taxa metagenomics
4.3 years ago by biobiu ▴ 150
0
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0
replies
822
views
Predicting peptide binding site of a protein
peptide
4.6 years ago by biobiu ▴ 150
0
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0
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5.7k
views
Answer: A: diamond blastp produce longer alignments with lower identity than ncbi blast
5.0 years ago by biobiu ▴ 150
0
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6
replies
5.7k
views
diamond blastp produce longer alignments with lower identity than ncbi blast
alignment blastp diamond
5.0 years ago by biobiu ▴ 150
0
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0
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5.7k
views
Comment: C: diamond blastp produce longer alignments with lower identity than ncbi blast
5.0 years ago by biobiu ▴ 150
0
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0
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5.7k
views
Comment: C: diamond blastp produce longer alignments with lower identity than ncbi blast
5.0 years ago by biobiu ▴ 150
2
votes
6
replies
6.1k
views
calculating abundance of metagenomes
Assembly alignment
updated 5.1 years ago by 7.7k • written 6.0 years ago by ▴ 150
0
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3
replies
2.1k
views
Panel of tumors for CNV detection
CNV CNA panel of normals
updated 21 months ago by • 0 • written 6.5 years ago by ▴ 150
0
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0
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2.6k
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Comment: A: Does mirna-seq is stranded?
updated 5.6 years ago by 45k • written 9.6 years ago by ▴ 150
0
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1
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112k
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Comment: A: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.6 years ago by 45k • written 9.1 years ago by ▴ 150
0
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1
reply
1.0k
views
Categorizing prokka outputs
gene
5.8 years ago by biobiu ▴ 150
0
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1
reply
1.7k
views
Comment: C: Download EC number tree
5.8 years ago by biobiu ▴ 150
2
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5
replies
1.7k
views
Download EC number tree
gene
updated 5.8 years ago by 153k • written 5.8 years ago by ▴ 150
0
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0
replies
1.7k
views
Comment: C: Download EC number tree
5.8 years ago by biobiu ▴ 150
3
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8
replies
5.0k
views
metagenomics- read based diversity analysis
metagenomics
updated 5.8 years ago by 3.4k • written 5.9 years ago by ▴ 150
0
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4
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12k
views
Diversity analysis after metaphlan2
metagenomics
updated 5.8 years ago by ▴ 50 • written 6.0 years ago by ▴ 150
0
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0
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7.0k
views
Comment: C: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
5.9 years ago by biobiu ▴ 150
1
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0
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7.0k
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Comment: A: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
5.9 years ago by biobiu ▴ 150
0
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0
replies
886
views
Proportion of traits in several groups
propotion-test fishers-exact-test
updated 2.2 years ago by 45k • written 6.0 years ago by ▴ 150
1
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1
reply
14k
views
Answer: A: Genome assembly statistical tools
6.0 years ago by biobiu ▴ 150
0
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0
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2.4k
views
Answer: A: Low value of mapped reads against a metagenomic co-assembly
6.0 years ago by biobiu ▴ 150
75 results • Page 1 of 2
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