Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
4.9k
views
Comment: C: Extremely low assigned reads in featureCounts
6.2 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
16k
views
Comment: C: error in getting results from DESeq2
updated 6.3 years ago by 45k • written 7.3 years ago by ▴ 550
0
votes
0
replies
2.7k
views
Comment: C: RNA-seq quality assessment
6.3 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
22k
views
Comment: C: How to interpret Per sequence GC content module in FastQC for RNA-seq data?
6.3 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
4.8k
views
Comment: C: Demultiplexing SRA data
6.5 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
19k
views
Comment: C: Can We Compare Two Different Rna-Seq Experiments?
6.6 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
5.6k
views
Comment: C: Combining RNA-seq data
6.6 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
6.7k
views
Comment: C: Combining the RNAseq datasets
6.6 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
30k
views
Comment: C: Can anyone suggest a good tutorial to learn RNA-seq analysis?
6.7 years ago by Arindam Ghosh ▴ 550
4
votes
2
replies
3.8k
views
How to efetch specific attributes from BioSamples?
ncbi eutils xml
updated 6.7 years ago by 166k • written 6.7 years ago by ▴ 550
0
votes
1
reply
2.2k
views
Comment: C: Data selection for RNA-seq data analysis
6.7 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
1.9k
views
Comment: C: What does cluster number in ClusterMaker represent?
6.8 years ago by Arindam Ghosh ▴ 550
2
votes
2
replies
1.9k
views
What does cluster number in ClusterMaker represent?
cytoscape clustering clustermaker network
updated 6.8 years ago by ▴ 650 • written 6.8 years ago by ▴ 550
0
votes
1
reply
1.8k
views
Comment: C: How to construct GCN?
6.9 years ago by Arindam Ghosh ▴ 550
2
votes
3
replies
1.8k
views
How to construct GCN?
RNA-Seq network gene coexpression network
updated 6.9 years ago by 89k • written 6.9 years ago by ▴ 550
0
votes
0
replies
1.8k
views
Comment: C: Low Sample For Coexpression
6.9 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
1.8k
views
Comment: C: Low Sample For Coexpression
6.9 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
2.4k
views
Comment: C: Any coexpression tools for RNAseq expression data
6.9 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
4.1k
views
What are the terms to look forward to for proper equilibration in GROMACS?
gromacs molecular dynamics
updated 7.0 years ago by ▴ 10 • written 7.7 years ago by ▴ 550
0
votes
0
replies
18k
views
Comment: C: Questions about DAVID
7.1 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
42k
views
Comment: A: How To Get Number Of Reads In Bam File Efficiently In Python?
7.1 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
12k
views
Comment: C: How filter genes to construct co-expression network?
7.2 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
11k
views
Comment: C: How to graphically tell if data has been normalized?
7.3 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
11k
views
Comment: C: How to graphically tell if data has been normalized?
7.3 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
11k
views
Comment: C: How to graphically tell if data has been normalized?
7.3 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
3.5k
views
Answer: A: Finding orientation of single-ended reads (R or F)
7.3 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
5.0k
views
Comment: C: removing outliers before running DESeq2
7.3 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
11k
views
Comment: C: How to graphically tell if data has been normalized?
7.3 years ago by Arindam Ghosh ▴ 550
13
votes
8
replies
11k
views
How to graphically tell if data has been normalized?
DESeq2 RNA-Seq normalization
updated 7.3 years ago by 89k • written 7.3 years ago by ▴ 550
0
votes
0
replies
4.6k
views
Comment: C: Number of Transcripts in GRCh38
7.3 years ago by Arindam Ghosh ▴ 550
1
vote
0
replies
9.5k
views
Comment: C: What is the difference between HISAT2 index "genome.tran" and "genome"
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
4.7k
views
Comment: C: HISAT2 and Stringtie: difference in Stringtie results when using pre-built index
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
3.5k
views
Comment: C: Build a HISAT2 index of hg 19
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
1
reply
3.7k
views
Comment: C: What if a network is not scale-free?
7.4 years ago by Arindam Ghosh ▴ 550
2
votes
7
replies
3.7k
views
What if a network is not scale-free?
network cytoscape RNA-Seq
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
6.2k
views
Answer: A: htslib installation problem
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
8.1k
views
Answer: A: Run htseq-count with multiple sam files?
7.4 years ago by Arindam Ghosh ▴ 550
3
votes
0
replies
26k
views
Answer: A: htseq-counts output merge into one matrix ??
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
5.4k
views
Comment: C: How many genes in RNA seq?
7.4 years ago by Arindam Ghosh ▴ 550
12
votes
19
replies
5.4k
views
6 follow
How many genes in RNA seq?
RNA-Seq stringtie
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
3
replies
5.4k
views
Comment: C: How many genes in RNA seq?
7.4 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
5.4k
views
Comment: C: How many genes in RNA seq?
7.4 years ago by Arindam Ghosh ▴ 550
1
vote
1
reply
5.4k
views
Comment: C: How many genes in RNA seq?
7.4 years ago by Arindam Ghosh ▴ 550
2
votes
8
replies
2.9k
views
6 follow
Which HTSeq mode is suitable for RNAseq data to be used for differential gene expression?
RNA-Seq alignment ngs
updated 7.5 years ago by 35k • written 7.5 years ago by ▴ 550
0
votes
1
reply
2.9k
views
Comment: C: Which HTSeq mode is suitable for RNAseq data to be used for differential gene ex
7.5 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
3.9k
views
What is a good binding energy in AutoDock?
docking autodock protein
7.5 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
3.3k
views
Comment: C: Code for DEG analysis using Ballgown
7.5 years ago by Arindam Ghosh ▴ 550
0
votes
2
replies
3.3k
views
Code for DEG analysis using Ballgown
RNA-Seq ballgown stattest ngs
updated 7.5 years ago by 5.9k • written 7.6 years ago by ▴ 550
0
votes
0
replies
1.6k
views
Comment: C: Ideas to improve the New Tuxedo
7.5 years ago by Arindam Ghosh ▴ 550
0
votes
0
replies
5.9k
views
Comment: C: Please adivse me on differential expression analysis on the STAR/Stringtie outpu
7.6 years ago by Arindam Ghosh ▴ 550
223 results • Page 3 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6