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163
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Tutorial:
Parsing HMMER output
HMMER
updated 7 days ago by
GenoMax
140k • written 7 days ago by
I0110
▴ 130
0
votes
1
reply
582
views
Comment:
Comment: Identifying syntenic gene pairs
8 months ago by
I0110
▴ 130
0
votes
3
replies
582
views
Identifying syntenic gene pairs
Synteny
updated 8 months ago by
dthorbur
★ 1.7k • written 8 months ago by
I0110
▴ 130
0
votes
1
reply
431
views
Pre-filtering of annotated isoforms based on splice junctions
RSEM
isoforms
splicing
RNA-seq
Kallisto
updated 9 months ago by
dthorbur
★ 1.7k • written 9 months ago by
I0110
▴ 130
0
votes
0
replies
825
views
Comment:
Comment: JBrowse on GitHub (A question about file size)
14 months ago by
I0110
▴ 130
3
votes
4
replies
825
views
JBrowse on GitHub (A question about file size)
JBrowse
GitHub
14 months ago by
I0110
▴ 130
0
votes
0
replies
586
views
Comment:
Comment: A question about STAR and SLURM
21 months ago by
I0110
▴ 130
3
votes
2
replies
586
views
A question about STAR and SLURM
SLURM
STAR
21 months ago by
I0110
▴ 130
12
votes
3
replies
722
views
A question about code sharing for publication
code
updated 15 months ago by
Ram
43k • written 22 months ago by
I0110
▴ 130
0
votes
1
reply
20k
views
Comment:
Comment: Filtration Of Reads With Length Lower Than 30 From Bam
22 months ago by
I0110
▴ 130
0
votes
0
replies
465
views
Understanding degradome-seq result
degradome
2.5 years ago by
I0110
▴ 130
0
votes
2
replies
22k
views
Comment:
C: Gene Set Enrichment Analysis
3.2 years ago by
I0110
▴ 130
0
votes
1
reply
22k
views
Comment:
A: Gene Set Enrichment Analysis
3.2 years ago by
I0110
▴ 130
2
votes
4
replies
1.5k
views
What is "Possible polymerase run-on fragment"?
transcriptome
updated 3.6 years ago by
Ram
43k • written 5.8 years ago by
I0110
▴ 130
2
votes
1
reply
3.6k
views
Thermo Xcalibur RAW data to MGF
mass spectrometry
massspectrometry
updated 4.1 years ago by
Biostar
20 • written 5.9 years ago by
I0110
▴ 130
6
votes
13
replies
4.9k
views
How to add the start and stop position information to a gff file?
genome
R
Assembly
Python
updated 4.6 years ago by
Juke34
8.5k • written 7.1 years ago by
I0110
▴ 130
0
votes
1
reply
2.4k
views
Comment:
C: Nanopore data to gtf/gff file
4.7 years ago by
I0110
▴ 130
0
votes
0
replies
2.4k
views
Comment:
C: Nanopore data to gtf/gff file
4.8 years ago by
I0110
▴ 130
1
vote
6
replies
2.4k
views
Nanopore data to gtf/gff file
sequencing
assembly
updated 2.9 years ago by
sonsunjirachote
• 0 • written 4.8 years ago by
I0110
▴ 130
0
votes
1
reply
2.4k
views
Comment:
C: Nanopore data to gtf/gff file
4.8 years ago by
I0110
▴ 130
7
votes
2
replies
1.4k
views
How to start a website with jbrowse to show sequencing data?
jbrowse
updated 5.5 years ago by
Biostar
20 • written 5.5 years ago by
I0110
▴ 130
0
votes
1
reply
2.3k
views
How to merge mgf files?
Proteomics
updated 5.6 years ago by
mobiusklein
▴ 180 • written 5.7 years ago by
I0110
▴ 130
0
votes
0
replies
1.5k
views
Comment:
C: What is "Possible polymerase run-on fragment"?
5.8 years ago by
I0110
▴ 130
0
votes
0
replies
3.0k
views
Comment:
C: transition to bioinformatics
5.8 years ago by
I0110
▴ 130
0
votes
1
reply
1.5k
views
Comment:
C: What is "Possible polymerase run-on fragment"?
5.8 years ago by
I0110
▴ 130
0
votes
0
replies
1.7k
views
Comment:
C: Possible polymerase run-on fragment (within 2Kbases of a reference transcript)
5.8 years ago by
I0110
▴ 130
1
vote
0
replies
2.1k
views
Comment:
C: CDS prediction for newly assembled transcripts
5.8 years ago by
I0110
▴ 130
2
votes
2
replies
2.1k
views
CDS prediction for newly assembled transcripts
RNA-Seq
transcriptome
Assembly
CDS
5.8 years ago by
I0110
▴ 130
0
votes
1
reply
2.2k
views
Comment:
C: How to fix 5'UTR annotation with RNA-seq data?
6.1 years ago by
I0110
▴ 130
1
vote
3
replies
2.2k
views
How to fix 5'UTR annotation with RNA-seq data?
RNA-Seq
updated 6.1 years ago by
rajeev.vikram
▴ 40 • written 6.1 years ago by
I0110
▴ 130
2
votes
1
reply
2.2k
views
Identify transcription start site using RNA-seq data
RNA-Seq
updated 6.2 years ago by
ababaian
▴ 50 • written 6.2 years ago by
I0110
▴ 130
0
votes
0
replies
1.0k
views
Comment:
C: The use of "and" in bioinformatics literature
6.2 years ago by
I0110
▴ 130
1
vote
2
replies
1.0k
views
The use of "and" in bioinformatics literature
Microarray
updated 6.2 years ago by
Ahill
★ 1.9k • written 6.2 years ago by
I0110
▴ 130
7
votes
4
replies
2.3k
views
In the gff3 format, could one eukaryotic mRNA contain more than one protein coding sequences (i.e. polycistronic)?
gff3
annotation
6.2 years ago by
I0110
▴ 130
0
votes
0
replies
2.3k
views
Comment:
C: In gff3 format, could one eukaryotic mRNA contain more than one protein coding s
6.2 years ago by
I0110
▴ 130
0
votes
1
reply
2.3k
views
Comment:
C: In gff3 format, could one eukaryotic mRNA contain more than one protein coding s
6.2 years ago by
I0110
▴ 130
0
votes
0
replies
970
views
bed file to gtf/gff
genome
annotation
6.6 years ago by
I0110
▴ 130
0
votes
1
reply
1.7k
views
Comment:
C: Host bam file on MongoDB?
6.6 years ago by
I0110
▴ 130
0
votes
1
reply
1.7k
views
Comment:
C: Host bam file on MongoDB?
6.6 years ago by
I0110
▴ 130
0
votes
1
reply
1.7k
views
Comment:
C: Host bam file on MongoDB?
6.6 years ago by
I0110
▴ 130
1
vote
7
replies
1.7k
views
Host bam file on MongoDB?
MongoDB
R
6.6 years ago by
I0110
▴ 130
0
votes
0
replies
2.5k
views
Comment:
C: Homologs between tomato and Arabidopsis
6.7 years ago by
I0110
▴ 130
0
votes
1
reply
2.5k
views
Comment:
C: Homologs between tomato and Arabidopsis
6.7 years ago by
I0110
▴ 130
6
votes
5
replies
2.5k
views
Homologs between tomato and Arabidopsis
genome
homology
updated 6.7 years ago by
h.mon
35k • written 6.7 years ago by
I0110
▴ 130
0
votes
0
replies
4.1k
views
Comment:
C: Differential expression for two very different samples
6.7 years ago by
I0110
▴ 130
0
votes
0
replies
4.1k
views
Comment:
C: Differential expression for two very different samples
6.7 years ago by
I0110
▴ 130
11
votes
13
replies
4.1k
views
6 follow
Differential expression for two very different samples
RNA-Seq
Statistics
updated 6.7 years ago by
James Ashmore
★ 3.4k • written 6.7 years ago by
I0110
▴ 130
0
votes
0
replies
4.1k
views
Comment:
C: How to compare two very different NGS samples?
6.7 years ago by
I0110
▴ 130
0
votes
0
replies
4.1k
views
Comment:
C: How to compare two very different NGS samples?
6.7 years ago by
I0110
▴ 130
0
votes
1
reply
4.1k
views
Comment:
C: How to compare two very different NGS samples?
6.7 years ago by
I0110
▴ 130
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