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Comment: Comment: Conflicting sequences between Genome Browser and NCBI (reference hg19).
15 months ago by dodausp ▴ 180
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3
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585
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Conflicting sequences between Genome Browser and NCBI (reference hg19).
NGS amino-acid
updated 15 months ago by 43k • written 15 months ago by ▴ 180
0
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1
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537
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How to evaluate batch-correction bias in expression data?
batch r normalization data correction methylation
updated 20 months ago by 82k • written 20 months ago by ▴ 180
1
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1
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723
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Comment: Comment: DNA sequencing from cord blood stem cells
21 months ago by dodausp ▴ 180
4
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3
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723
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DNA sequencing from cord blood stem cells
NGS stemcell germline GATK
updated 21 months ago by ★ 1.9k • written 21 months ago by ▴ 180
4
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1
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1.8k
views
Are probes flagged as cross-reactive on Illumina's Methylation 450K still flagged on the EPIC methylation array?
illumina microarrays methylation
updated 2.4 years ago by ★ 2.0k • written 4.6 years ago by ▴ 180
1
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4
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1.2k
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NGS/GATK pipeline returns too many variants
NGS WES GATK Mutect
updated 5 weeks ago by • 0 • written 3.2 years ago by ▴ 180
4
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4
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3.7k
views
NMF not working for identifying mutational signature
NMF mutational signature ranking SNP matrix
updated 3.8 years ago by • 0 • written 5.5 years ago by ▴ 180
1
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1
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16k
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Comment: C: Best tool for variant calling
3.9 years ago by dodausp ▴ 180
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3
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1.2k
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Retrieving multiple regions (from a list) in a bam file and outputing as a table
WES SNP data frame
4.1 years ago by dodausp ▴ 180
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1
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1.2k
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Comment: C: Retrieving multiple regions (from a list) in a bam file and outputing as a table
4.1 years ago by dodausp ▴ 180
0
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1
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791
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Comment: C: Run RNA-seq analysis with selected targets
4.2 years ago by dodausp ▴ 180
1
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4
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791
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Run RNA-seq analysis with selected targets
RNA-Seq alignment cufflinks
4.2 years ago by dodausp ▴ 180
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0
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690
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RNA-seq assembly data not matching reference (cufflinks)
RNA-Seq alignment assembly
4.2 years ago by dodausp ▴ 180
1
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1
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1.2k
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Comment: C: How to perform iteration task inside a docker image (RNA-seq analysis)
4.2 years ago by dodausp ▴ 180
2
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3
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1.2k
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How to perform iteration task inside a docker image (RNA-seq analysis)
RNA-Seq quantification docker
updated 4.2 years ago by ★ 1.3k • written 4.2 years ago by ▴ 180
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0
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4.2k
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Answer: A: error while running vcf2maf
4.3 years ago by dodausp ▴ 180
1
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2
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773
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How to compare sequencing data from same sample, but from different methods?
sequencing comparison
4.3 years ago by dodausp ▴ 180
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0
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773
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Comment: C: How to compare sequencing data from same sample, but from different methods?
4.3 years ago by dodausp ▴ 180
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0
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1.6k
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Comment: C: How to use ExAC/gnomAD without chrN_random?
4.4 years ago by dodausp ▴ 180
1
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0
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1.6k
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Answer: A: How to use ExAC/gnomAD without chrN_random?
4.4 years ago by dodausp ▴ 180
1
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5
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1.6k
views
How to use ExAC/gnomAD without chrN_random?
sequencing variant calling SNP ExAc
4.4 years ago by dodausp ▴ 180
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0
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1.6k
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Comment: C: How to use ExAC/gnomAD without chrN_random?
4.4 years ago by dodausp ▴ 180
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0
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1.3k
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Comment: C: How to skip vep-annotating step for vcf2maf
4.5 years ago by dodausp ▴ 180
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0
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3.1k
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Comment: C: Infer somatic mutations without normal control
4.5 years ago by dodausp ▴ 180
0
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1
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3.1k
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Comment: C: Infer somatic mutations without normal control
4.5 years ago by dodausp ▴ 180
0
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0
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3.1k
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Comment: C: Infer somatic mutations without normal control
4.5 years ago by dodausp ▴ 180
0
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2
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3.1k
views
Comment: C: Infer somatic mutations without normal control
4.6 years ago by dodausp ▴ 180
0
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1
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3.1k
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Comment: C: Infer somatic mutations without normal control
4.6 years ago by dodausp ▴ 180
0
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1
reply
3.1k
views
Comment: C: Infer somatic mutations without normal control
4.6 years ago by dodausp ▴ 180
0
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1
reply
8.2k
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Comment: C: Complex heatmaps: how not to cluster the slices?
4.6 years ago by dodausp ▴ 180
0
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1
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8.2k
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Answer: A: Complex heatmaps: how not to cluster the slices?
4.6 years ago by dodausp ▴ 180
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0
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3.4k
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Answer: A: How to convert maf file format to oncoPrint matrix (ComplexHeatmap package)?
4.6 years ago by dodausp ▴ 180
0
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0
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859
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Making a contrast matrix with multiple co-variates for differential expression analysis
R limma differential expression linear model
4.6 years ago by dodausp ▴ 180
0
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2
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92k
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Comment: C: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
4.7 years ago by dodausp ▴ 180
1
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3
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1.6k
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Finding the best combination of covarites in a multivariate linear regression
gene expression overall survival linear model R
4.9 years ago by dodausp ▴ 180
0
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0
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1.6k
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Comment: C: Finding the best combination of covarites in a multivariate linear regression
4.9 years ago by dodausp ▴ 180
0
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0
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2.0k
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Comment: C: Exploring association between genes by their expression
4.9 years ago by dodausp ▴ 180
6
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9
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2.0k
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Exploring association between genes by their expression
gene expression correlation R linear model
4.9 years ago by dodausp ▴ 180
0
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1
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2.0k
views
Comment: A: Exploring association between genes by their expression
4.9 years ago by dodausp ▴ 180
0
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0
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2.0k
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Comment: C: Exploring association between genes by their expression
4.9 years ago by dodausp ▴ 180
0
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1
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2.0k
views
Comment: C: Exploring association between genes by their expression
5.0 years ago by dodausp ▴ 180
0
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2
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2.0k
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Comment: C: Exploring association between genes by their expression
5.0 years ago by dodausp ▴ 180
0
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0
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2.7k
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Comment: A: Should We Have A Native Biostar Mobile App?
5.0 years ago by dodausp ▴ 180
0
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1
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6.4k
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Comment: C: Performing univariate and multivariate logistic regression in gene expression da
5.0 years ago by dodausp ▴ 180
0
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1
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6.4k
views
Comment: C: Performing univariate and multivariate logistic regression in gene expression da
5.1 years ago by dodausp ▴ 180
0
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1
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6.4k
views
Comment: C: Performing univariate and multivariate logistic regression in gene expression da
5.1 years ago by dodausp ▴ 180
14
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7
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6.4k
views
Performing univariate and multivariate logistic regression in gene expression data
gene expression logistic regression R Affymetrix
updated 2.8 years ago by 87k • written 5.1 years ago by ▴ 180
1
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1
reply
1.2k
views
How to find true mutations in tumor by removing the background from matched sample?
exome-seq SNP normalization R pipeline
updated 5.4 years ago by ★ 3.4k • written 5.4 years ago by ▴ 180
2
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0
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3.4k
views
Answer: A: Data retrieval icgc
5.4 years ago by dodausp ▴ 180
66 results • Page 1 of 2
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