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730
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Comment: Comment: Differential gene expression analysis between species using methods involving re
16 days ago by arsala521 ▴ 60
2
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3
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730
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Differential gene expression analysis between species using methods involving read alignment to transcriptome
RNA-seq kallisto tximp DEGs
16 days ago by arsala521 ▴ 60
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1
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2.0k
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Comment: Comment: Uploading HiC track on UCSC browser
20 months ago by arsala521 ▴ 60
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1
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2.0k
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Comment: Comment: Uploading HiC track on UCSC browser
20 months ago by arsala521 ▴ 60
5
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6
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2.0k
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Uploading HiC track on UCSC browser
custom_track UCSC HiC
updated 15 months ago by ★ 1.8k • written 20 months ago by ▴ 60
0
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0
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540
views
Loop and TAD calling from HiC reads using HOMER
HiC HOMER
updated 22 months ago by 45k • written 22 months ago by ▴ 60
0
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1
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2.1k
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Comment: Comment: Getting gene counts from transcript counts using R package 'tximport'
23 months ago by arsala521 ▴ 60
3
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4
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2.1k
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Getting gene counts from transcript counts using R package 'tximport'
tximport RNA-seq
updated 23 months ago by 45k • written 23 months ago by ▴ 60
3
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1
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852
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Data for non-human primates
APPRIS UCSC GENCODE Non-human-primates
updated 24 months ago by 154k • written 24 months ago by ▴ 60
2
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2
replies
1.1k
views
Ensembl transcript IDs
Ensembl transcript IDs
written 2.1 years ago by ▴ 60
1
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1
reply
874
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Getting differentially expressed transcripts among primates from RNA-seq data
differential-gene-expression RNA-seq-data-analysis
updated 2.0 years ago by ★ 3.1k • written 2.1 years ago by ▴ 60
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0
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2.4k
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Comment: Comment: Genes' fpkm values through cufflink
2.5 years ago by arsala521 ▴ 60
0
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1
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2.4k
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Comment: Comment: Genes' fpkm values through cufflink
2.5 years ago by arsala521 ▴ 60
8
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5
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2.4k
views
Genes' fpkm values through cufflink
Cufflink RNA-seq fpkm
2.5 years ago by arsala521 ▴ 60
1
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0
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2.0k
views
Comment: Comment: Centromere and telomere positions for Chm13v2 assembly
2.6 years ago by arsala521 ▴ 60
4
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5
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2.0k
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Centromere and telomere positions for Chm13v2 assembly
centromere chm13v2
updated 2.3 years ago by ▴ 120 • written 2.6 years ago by ▴ 60
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1
reply
1.1k
views
Subtracting bed file from whole genome
bed
updated 3.2 years ago by 90k • written 3.2 years ago by ▴ 60
0
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0
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6.9k
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Comment: Comment: Extract chromosome 1 - 22 fasta file
3.4 years ago by arsala521 ▴ 60
0
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0
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891
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Hi-C data analysis (Loop and domain calling)
calling and Hi-C HOMER domain Loop
3.4 years ago by arsala521 ▴ 60
0
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0
replies
492
views
Getting length of total region aligned to cluster of paired end reads
paired-reads alignment
3.4 years ago by arsala521 ▴ 60
0
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1
reply
6.9k
views
Comment: Comment: Extract chromosome 1 - 22 fasta file
3.4 years ago by arsala521 ▴ 60
0
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0
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606
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Access results from previous version of PANTHER/GO database
ontology Gene PANTHER
3.6 years ago by arsala521 ▴ 60
0
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0
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4.4k
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Comment: Comment: Getting peak heights from TF chIP-seq data (wig file)
3.9 years ago by arsala521 ▴ 60
0
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0
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4.4k
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Comment: Comment: Getting peak heights from TF chIP-seq data (wig file)
3.9 years ago by arsala521 ▴ 60
0
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1
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4.4k
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Comment: Comment: Getting peak heights from TF chIP-seq data (wig file)
3.9 years ago by arsala521 ▴ 60
0
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0
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4.4k
views
Comment: Comment: Getting peak heights from TF chIP-seq data (wig file)
3.9 years ago by arsala521 ▴ 60
0
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1
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4.4k
views
Comment: Comment: Getting peak heights from TF chIP-seq data (wig file)
3.9 years ago by arsala521 ▴ 60
2
votes
10
replies
4.4k
views
Getting peak heights from TF chIP-seq data (wig file)
ChIP-seq
updated 2.3 years ago by 45k • written 3.9 years ago by ▴ 60
8
votes
8
replies
8.1k
views
TSS of protein coding genes
TSS protein coding genes ucsc
updated 2.7 years ago by ▴ 60 • written 5.2 years ago by ▴ 60
1
vote
1
reply
975
views
Graphical map of TFBSs
Genome Jbrowse browser
updated 4.1 years ago by ★ 4.4k • written 4.1 years ago by ▴ 60
0
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0
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986
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BEDPE file for ENCODE 3D chromatin structure data
BEDPE
4.3 years ago by arsala521 ▴ 60
0
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0
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1.8k
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Comment: Comment: Output from macs subcommand 'bdgpeakcall'
4.3 years ago by arsala521 ▴ 60
0
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2
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1.8k
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Output from macs subcommand 'bdgpeakcall'
Output macs header
4.3 years ago by arsala521 ▴ 60
0
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0
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2.0k
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Comment: Comment: Getting peak (bed narrowPeak) from signals (Wig)
4.4 years ago by arsala521 ▴ 60
1
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2
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2.0k
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Getting peak (bed narrowPeak) from signals (Wig)
data ChIP-seq analysis
4.4 years ago by arsala521 ▴ 60
0
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3
replies
1.9k
views
Synonymous and asynonymous sites in Ka/Ks
Ka Ks
updated 4.6 years ago by 103k • written 4.6 years ago by ▴ 60
0
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0
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1.9k
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Comment: Comment: Synonymous and asynonymous sites in Ka/Ks
4.6 years ago by arsala521 ▴ 60
0
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0
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808
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Identification of paralogs having parental/daughter relationship
paralogs
4.6 years ago by arsala521 ▴ 60
0
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0
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1.5k
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Comment: C: Gene annotations of mammalian genomes
4.7 years ago by arsala521 ▴ 60
0
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1
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1.5k
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Comment: C: Gene annotations of mammalian genomes
4.7 years ago by arsala521 ▴ 60
2
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4
replies
1.5k
views
Gene annotations of mammalian genomes
Gene annotation mammalian genomes
4.7 years ago by arsala521 ▴ 60
0
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0
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1.7k
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Comment: C: Getting human-specific regions of the human genome
4.9 years ago by arsala521 ▴ 60
0
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0
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1.7k
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Comment: C: Getting human-specific regions of the human genome
4.9 years ago by arsala521 ▴ 60
0
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0
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1.7k
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Comment: C: Getting human-specific regions of the human genome
4.9 years ago by arsala521 ▴ 60
0
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1
reply
1.7k
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Comment: C: Getting human-specific regions of the human genome
4.9 years ago by arsala521 ▴ 60
0
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9
replies
1.7k
views
Getting human-specific regions of the human genome
human-specific regions
updated 4.9 years ago by 36k • written 4.9 years ago by ▴ 60
0
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1
reply
4.3k
views
Comment: C: TSS of canonical transcripts
5.2 years ago by arsala521 ▴ 60
0
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1
reply
4.3k
views
Comment: C: TSS of canonical transcripts
5.2 years ago by arsala521 ▴ 60
0
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0
replies
4.3k
views
Comment: C: TSS of canonical transcripts
5.2 years ago by arsala521 ▴ 60
5
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7
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4.3k
views
TSS of canonical transcripts
TSS canonical transcripts
updated 5.2 years ago by 90k • written 5.2 years ago by ▴ 60
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