Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
all
0
votes
0
replies
468
views
FilterMutectCalls mutect2
gatk
mutect2
15 months ago by
Varun Gupta
★ 1.3k
29
votes
4
replies
25k
views
Bwa Mem -M Option
updated 2.2 years ago by
aminghane22
• 0 • written 10.1 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
16k
views
Comment:
Comment: survfit(Surv()) P-value interpretation for 3 survival curves?
2.6 years ago by
Varun Gupta
★ 1.3k
13
votes
9
replies
7.9k
views
Read Counts For Genes
read
counts
updated 3.4 years ago by
jerry
▴ 130 • written 12.2 years ago by
Varun Gupta
★ 1.3k
1
vote
2
replies
2.0k
views
Bowtie1 Options For Mirna
mirna
updated 3.5 years ago by
Biostar
20 • written 10.2 years ago by
Varun Gupta
★ 1.3k
7
votes
4
replies
16k
views
Wiggle File 2 Bed File
wiggle
format
conversion
bed
updated 3.7 years ago by
Biostar
20 • written 12.4 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
5.5k
views
Comment:
C: bowtie1 -m --best --strata options
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
17k
views
Comment:
C: Mismatch Option In Bowtie2
updated 4.4 years ago by
Ram
43k • written 10.9 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
6.5k
views
Comment:
C: How To Query The Human Chipseq Data (Encode) For A Transcription Factor Binding
updated 4.4 years ago by
Ram
43k • written 10.0 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
6.5k
views
Comment:
C: How To Query The Human Chipseq Data (Encode) For A Transcription Factor Binding
updated 4.4 years ago by
Ram
43k • written 10.0 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
13k
views
Comment:
C: padj value in DEseq package
updated 4.4 years ago by
Ram
43k • written 10.0 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
6.2k
views
Comment:
C: Making TSS plots for some genes for a particular histone mark
updated 4.5 years ago by
Ram
43k • written 8.8 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
7.5k
views
Answer:
A: Customize IGV coverage track in R
updated 4.6 years ago by
Ram
43k • written 10.0 years ago by
Varun Gupta
★ 1.3k
1
vote
2
replies
4.0k
views
Tophat Alignment Score And Parameters
tophat2
updated 16 months ago by
Ram
43k • written 11.2 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
18k
views
Comment:
C: extracting the soft clipped seq only from a sam file
updated 4.9 years ago by
Ram
43k • written 9.4 years ago by
Varun Gupta
★ 1.3k
0
votes
3
replies
18k
views
Comment:
C: extracting the soft clipped seq only from a sam file
updated 4.9 years ago by
Ram
43k • written 9.4 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
18k
views
Comment:
C: extracting the soft clipped seq only from a sam file
updated 4.9 years ago by
Ram
43k • written 9.4 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
18k
views
Comment:
C: extracting the soft clipped seq only from a sam file
updated 4.9 years ago by
Ram
43k • written 9.4 years ago by
Varun Gupta
★ 1.3k
0
votes
2
replies
18k
views
Comment:
C: extracting the soft clipped seq only from a sam file
updated 4.9 years ago by
Ram
43k • written 9.4 years ago by
Varun Gupta
★ 1.3k
1
vote
1
reply
18k
views
Comment:
C: extracting the soft clipped seq only from a sam file
updated 4.9 years ago by
Ram
43k • written 9.4 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
18k
views
Comment:
C: extracting the soft clipped seq only from a sam file
updated 4.9 years ago by
Ram
43k • written 9.4 years ago by
Varun Gupta
★ 1.3k
17
votes
4
replies
6.0k
views
fastq file on the basis of read length
fastq
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
Varun Gupta
★ 1.3k
1
vote
1
reply
2.3k
views
Filtering reads on the basis of percentage of ambiguous(N's) characters
fastq
RNA-Seq
filter
updated 5.9 years ago by
Pierre Lindenbaum
161k • written 5.9 years ago by
Varun Gupta
★ 1.3k
2
votes
8
replies
7.6k
views
Picard Mark Duplicates
picard
markduplicates
updated 6.0 years ago by
marcela.uliano
▴ 90 • written 6.1 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
7.6k
views
Comment:
C: Picard Mark Duplicates
6.1 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
7.6k
views
Comment:
C: Picard Mark Duplicates
6.1 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
7.6k
views
Comment:
C: Picard Mark Duplicates
6.1 years ago by
Varun Gupta
★ 1.3k
1
vote
0
replies
2.7k
views
Comment:
C: genomeCoverageBed for per nucleotide coverage
6.1 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
2.7k
views
Comment:
C: genomeCoverageBed for per nucleotide coverage
6.1 years ago by
Varun Gupta
★ 1.3k
6
votes
4
replies
2.7k
views
genomeCoverageBed for per nucleotide coverage
bedtools
updated 6.1 years ago by
Kevin Blighe
88k • written 6.1 years ago by
Varun Gupta
★ 1.3k
4
votes
12
replies
4.2k
views
Saving IGV images for bigwig files
igv
bigwig
updated 6.3 years ago by
dariober
14k • written 6.3 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
4.2k
views
Comment:
C: Saving IGV images for bigwig files
6.3 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
4.2k
views
Comment:
C: Saving IGV images for bigwig files
6.3 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
4.2k
views
Comment:
C: Saving IGV images for bigwig files
6.3 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
4.2k
views
Comment:
C: Saving IGV images for bigwig files
6.3 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
61k
views
Comment:
C: How To Efficiently Parse A Huge Fastq File?
6.3 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
6.7k
views
Comment:
C: Any tools to quantify intron retention in RNAseq data?
6.3 years ago by
Varun Gupta
★ 1.3k
4
votes
4
replies
11k
views
Rpkm Calculation
rpkm
updated 6.7 years ago by
Biostar
20 • written 12.2 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
3.2k
views
Comment:
C: querying blast database for rna seq reads
6.7 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
3.2k
views
Comment:
C: querying blast database for rna seq reads
6.7 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
3.2k
views
Comment:
C: querying blast database for rna seq reads
6.7 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
3.2k
views
Comment:
C: querying blast database for rna seq reads
6.7 years ago by
Varun Gupta
★ 1.3k
0
votes
9
replies
3.2k
views
querying blast database for rna seq reads
blast
blastn
RNA-Seq
updated 6.7 years ago by
GenoMax
142k • written 6.7 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
6.7k
views
Comment:
Comment: Any tools to quantify intron retention in RNAseq data?
updated 2.7 years ago by
Ram
43k • written 6.8 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
2.0k
views
Comment:
C: exon quantification for tissue samples
7.2 years ago by
Varun Gupta
★ 1.3k
2
votes
2
replies
2.0k
views
exon quantification for tissue samples
RNA-Seq
exon
count
splice
updated 7.2 years ago by
EagleEye
7.5k • written 7.2 years ago by
Varun Gupta
★ 1.3k
13
votes
17
replies
11k
views
8 follow
cutadapt for trimming reads to specific length
cutadapt
trim-galore
updated 12 weeks ago by
xiaoleiusc
▴ 140 • written 7.6 years ago by
Varun Gupta
★ 1.3k
0
votes
1
reply
2.8k
views
genomeCoverageBed : for fixed size bins
bedtools
updated 7.3 years ago by
apa@stowers
▴ 600 • written 7.3 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
11k
views
Comment:
C: cutadapt for trimming reads to specific length
7.6 years ago by
Varun Gupta
★ 1.3k
0
votes
0
replies
11k
views
Comment:
C: cutadapt for trimming reads to specific length
7.6 years ago by
Varun Gupta
★ 1.3k
215 results • Page
1 of 5
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6