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Answer: A: Empty output from MACS2 when using control
updated 5.9 years ago by 45k • written 8.1 years ago by ▴ 170
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0
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2.1k
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Comment: C: Remove batch effect between MoGene-1_1-st and Mouse430_2 Affymetrix
updated 6.0 years ago by 45k • written 10.0 years ago by ▴ 170
2
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1
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204k
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Answer: A: How to download raw sequence data from GEO/SRA
updated 6.8 years ago by 45k • written 9.7 years ago by ▴ 170
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0
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3.7k
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Answer: A: Visualize smooth ChIP peaks with Homer makeUCSCfile
8.1 years ago by macmath ▴ 170
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5.1k
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Comment: A: interpretation Abyss stats
8.3 years ago by macmath ▴ 170
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Comment: C: How to filter subnetworks associated to specific cell type from human homo sapie
8.3 years ago by macmath ▴ 170
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1
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2.1k
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Comment: C: How to filter subnetworks associated to specific cell type from human homo sapie
8.3 years ago by macmath ▴ 170
1
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4
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2.1k
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How to filter subnetworks associated to specific cell type from human homo sapiens PPI network
PPInetwork proteome
updated 8.3 years ago by 27k • written 8.3 years ago by ▴ 170
0
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1
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8.7k
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Comment: Comment: To get genes for each clusters from heatmap
updated 3.0 years ago by 45k • written 8.3 years ago by ▴ 170
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4.4k
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Comment: C: Heatmap for RNA-Seq data
8.3 years ago by macmath ▴ 170
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0
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34k
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Answer: A: Biomart Bioconductor - Retrieving All Entrezgenes Of Hsapiens_Gene_Ensembl
8.3 years ago by macmath ▴ 170
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Answer: A: Is There A Webpage Or Server That Contains Data On Mouse Mitchondrial Genes Wit
8.3 years ago by macmath ▴ 170
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2
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2.6k
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Comment: C: Advice for RNAseq timepoint analysis
8.3 years ago by macmath ▴ 170
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1
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2.6k
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Comment: C: Advice for RNAseq timepoint analysis
8.3 years ago by macmath ▴ 170
3
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7
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2.6k
views
Advice for RNAseq timepoint analysis
rna-seq
updated 8.3 years ago by ★ 1.4k • written 8.3 years ago by ▴ 170
0
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1
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11k
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Comment: C: How to collapseReplicate in DESeq2
8.3 years ago by macmath ▴ 170
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0
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11k
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Comment: C: How to collapseReplicate in DESeq2
8.3 years ago by macmath ▴ 170
14
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6
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11k
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How to collapseReplicate in DESeq2
RNA-Seq
8.3 years ago by macmath ▴ 170
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0
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2.6k
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Comment: C: Advice needed on RNAseq technical and biological replicates analysis using DEseq
8.4 years ago by macmath ▴ 170
1
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2
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2.6k
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Advice needed on RNAseq technical and biological replicates analysis using DEseq2
RNA-Seq DESeq2 next-gen
updated 8.4 years ago by ▴ 330 • written 8.4 years ago by ▴ 170
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0
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3.3k
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Comment: C: How and what are the steps for performing RNAseq Time point analysis 3 biologica
8.4 years ago by macmath ▴ 170
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0
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3.3k
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Comment: C: How and what are the steps for performing RNAseq Time point analysis 3 biologica
8.4 years ago by macmath ▴ 170
4
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9
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3.3k
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How and what are the steps for performing RNAseq Time point analysis 3 biological replicates and 4 Technical replicates for each
RNA-Seq Time point
updated 8.4 years ago by 56k • written 8.4 years ago by ▴ 170
0
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2
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3.3k
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Comment: A: How and what are the steps for performing RNAseq Time point analysis 3 biologica
8.4 years ago by macmath ▴ 170
0
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1
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63k
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Comment: C: I would like to add gene names to a volcano plot obtained from DEseq2
8.5 years ago by macmath ▴ 170
0
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0
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17k
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Answer: A: Which Chip Seq Peak Callers Do You Use?
8.7 years ago by macmath ▴ 170
0
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0
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7.6k
views
Answer: Answer: How to get mouse-human homologues table from UCSC?
updated 2.9 years ago by 45k • written 8.8 years ago by ▴ 170
0
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0
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2.0k
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Query processing Illumina Expression Microarray
microarray workflow llumina
8.8 years ago by macmath ▴ 170
0
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0
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1.8k
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How to analyse Nano-ChIP-Seq data
ChIP-Seq nano-ChIP-seq
updated 3.2 years ago by 45k • written 10.0 years ago by ▴ 170
0
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0
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2.1k
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Comment: C: Remove batch effect between MoGene-1_1-st and Mouse430_2 Affymetrix
10.0 years ago by macmath ▴ 170
0
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4
replies
2.1k
views
Remove batch effect between MoGene-1_1-st and Mouse430_2 Affymetrix
affymetrix batch-effect R Microarray
updated 3.2 years ago by 45k • written 10.0 years ago by ▴ 170
1
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0
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4.6k
views
Answer: Answer: Please share the best tool for de novo motif discovery in large dataset
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 170
1
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0
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76k
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Answer: A: Converting Affymetrix Probes To Gene Ids
10.7 years ago by macmath ▴ 170
0
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1
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2.8k
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Comment: Comment: Which method could be used for cross normailizing microarray samples from differ
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 170
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0
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2.8k
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Comment: Comment: Which method could be used for cross normailizing microarray samples from differ
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 170
1
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4
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2.8k
views
Which method could be used for cross normailizing microarray samples from different platforms namely (Affmetrix, Agilent,Illumina..) ?
microarray normalization
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 170
9
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2
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6.2k
views
How to create Correlation plots between wig files
ChIP-Seq RNA-Seq wig
updated 3.8 years ago by 45k • written 11.2 years ago by ▴ 170
0
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0
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3.0k
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Answer: A: Obtaining Downstream Non-Coding Sequences For A Gene From Ucsc Or Ensembl
12.7 years ago by macmath ▴ 170
0
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0
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3.8k
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Answer: Answer: Mapped Reads Into A Gene Level Count
updated 3.1 years ago by 45k • written 12.7 years ago by ▴ 170
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0
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4.1k
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Answer: A: How To Set Rapd Data For Analysis In Excel?
12.7 years ago by macmath ▴ 170
0
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0
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26k
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Answer: A: Extracting Columns From Csv File And Puting It In An Perl Array Data Type.
12.8 years ago by macmath ▴ 170
8
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10
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3.0k
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Substitute The File From Respective Definitions In Tab Separated File
awk
updated 12.8 years ago by 49k • written 12.8 years ago by ▴ 170
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0
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3.1k
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Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
12.8 years ago by macmath ▴ 170
0
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0
replies
3.1k
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Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
12.8 years ago by macmath ▴ 170
0
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1
reply
3.1k
views
Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
12.8 years ago by macmath ▴ 170
4
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8
replies
3.1k
views
Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
awk
updated 12.8 years ago by 166k • written 12.8 years ago by ▴ 170
0
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1
reply
3.1k
views
Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
12.8 years ago by macmath ▴ 170
0
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2
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3.0k
views
Comment: C: Substitute The File From Respective Definitions In Tab Separated File
12.8 years ago by macmath ▴ 170
11
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8
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4.1k
views
Extract Common Line Out Of Multiple Files
awk comparison
updated 12.9 years ago by 12k • written 12.9 years ago by ▴ 170
0
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0
replies
4.1k
views
Comment: C: Extract Common Line Out Of Multiple Files
12.9 years ago by macmath ▴ 170
57 results • Page 1 of 2
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