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2
votes
4
replies
1.3k
views
Estimating transcript integrity after cDNA sequencing for long read data (Nanopore)
cDNA nanopore RSeQC
updated 10 months ago by 152k • written 10 months ago by ★ 1.5k
0
votes
1
reply
1.3k
views
Comment: Comment: Estimating transcript integrity after cDNA sequencing for long read data (Nanopo
10 months ago by Rox ★ 1.5k
5
votes
7
replies
10k
views
Remove adaptaters from ONT reads : An alternative to Porechop ?
minion promethion porechop nanopore ONT oxford
updated 17 months ago by 56k • written 6.7 years ago by ★ 1.5k
3
votes
1
reply
2.0k
views
Breakdancer : bam2cfg.pl doesn't work with merged bam
breakdancer
updated 3.2 years ago by • 0 • written 7.5 years ago by ★ 1.5k
2
votes
1
reply
2.8k
views
Comment: Comment: GFF3 TO GTF CONVERSION
3.5 years ago by Rox ★ 1.5k
0
votes
1
reply
1.3k
views
Comment: Comment: How to associate Trinity ID with close related species transcript ID
3.5 years ago by Rox ★ 1.5k
2
votes
3
replies
1.3k
views
How to associate Trinity ID with close related species transcript ID
trinity transcriptome
updated 3.5 years ago by 56k • written 3.5 years ago by ★ 1.5k
9
votes
1
reply
2.0k
views
General question about clustering in scRNAseq
scRNAseq Seurat clustering
updated 3.7 years ago by ★ 1.1k • written 3.7 years ago by ★ 1.5k
0
votes
0
replies
2.1k
views
Comment: Comment: Issue reading fasta file with Biopython
3.9 years ago by Rox ★ 1.5k
0
votes
0
replies
2.1k
views
Comment: Comment: Issue reading fasta file with Biopython
3.9 years ago by Rox ★ 1.5k
0
votes
3
replies
2.1k
views
Issue reading fasta file with Biopython
python
3.9 years ago by Rox ★ 1.5k
3
votes
1
reply
2.2k
views
Interpretation of .gfa
flye bandage assembly
3.9 years ago by Rox ★ 1.5k
2
votes
0
replies
2.2k
views
Answer: Answer: Interpretation of .gfa
3.9 years ago by Rox ★ 1.5k
1
vote
0
replies
12k
views
Answer: Answer: Any methods available to do QC analysis of Pacbio raw data??
4.1 years ago by Rox ★ 1.5k
0
votes
1
reply
1.7k
views
Issue indexing a genome with bowtie2
software error bowtie2
4.6 years ago by Rox ★ 1.5k
0
votes
5
replies
3.2k
views
Calculate numbers of indels <=2 nt within sam
script
updated 4.7 years ago by 20 • written 8.1 years ago by ★ 1.5k
0
votes
0
replies
1.3k
views
Explaining myJuicer.sh different steps
hi-c juicer
5.0 years ago by Rox ★ 1.5k
59
votes
43
replies
25k
views
18 follow
Tutorial: Polish PacBio assembly with latest PacBio tools : an affordable solution for everyone
pbalign pacbio arrow smrt-limk
updated 2.3 years ago by 45k • written 7.8 years ago by ★ 1.5k
6
votes
12
replies
6.0k
views
Python and SLURM environment : clarifications needed
python slurm
updated 5.8 years ago by 20 • written 5.9 years ago by ★ 1.5k
0
votes
0
replies
3.4k
views
Comment: C: Working abroad without a PhD
5.8 years ago by Rox ★ 1.5k
21
votes
15
replies
3.4k
views
9 follow
Forum: Working abroad without a PhD
career
updated 2.1 years ago by 45k • written 5.8 years ago by ★ 1.5k
0
votes
1
reply
3.4k
views
Comment: C: Working abroad without a PhD
5.8 years ago by Rox ★ 1.5k
0
votes
0
replies
3.4k
views
Comment: C: Working abroad without a PhD
5.8 years ago by Rox ★ 1.5k
0
votes
0
replies
13k
views
Comment: C: Using the MinION MinKNOW software on Ubuntu 1604
5.9 years ago by Rox ★ 1.5k
2
votes
1
reply
13k
views
Comment: C: Using the MinION MinKNOW software on Ubuntu 1604
5.9 years ago by Rox ★ 1.5k
1
vote
0
replies
9.6k
views
Comment: C: Snakemake input and wildcards
5.9 years ago by Rox ★ 1.5k
1
vote
0
replies
9.6k
views
Comment: C: Snakemake input and wildcards
5.9 years ago by Rox ★ 1.5k
0
votes
2
replies
6.0k
views
Comment: C: Python and SLURM environment : clarifications needed
5.9 years ago by Rox ★ 1.5k
0
votes
0
replies
9.6k
views
Comment: C: Snakemake input and wildcards
5.9 years ago by Rox ★ 1.5k
6
votes
5
replies
9.6k
views
Snakemake input and wildcards
snakemake python
updated 5.9 years ago by ▴ 700 • written 5.9 years ago by ★ 1.5k
0
votes
0
replies
6.0k
views
Comment: C: Python and SLURM environment : clarifications needed
5.9 years ago by Rox ★ 1.5k
0
votes
1
reply
6.0k
views
Comment: C: Python and SLURM environment : clarifications needed
5.9 years ago by Rox ★ 1.5k
0
votes
1
reply
6.0k
views
Comment: C: Python and SLURM environment : clarifications needed
5.9 years ago by Rox ★ 1.5k
0
votes
1
reply
3.4k
views
Comment: C: List of genome annotation tools (>140)
5.9 years ago by Rox ★ 1.5k
3
votes
1
reply
4.7k
views
How to use minimap2 with mappy within python script
alignment nanopore
5.9 years ago by Rox ★ 1.5k
3
votes
0
replies
4.7k
views
Answer: A: How to use minimap2 with mappy within python script
5.9 years ago by Rox ★ 1.5k
0
votes
1
reply
5.6k
views
Comment: C: Looking for a tool like fastq screen but for ONT data
6.4 years ago by Rox ★ 1.5k
4
votes
1
reply
6.6k
views
Answer: A: PacBio sequencing for variant calling?
updated 6.5 years ago by 152k • written 6.5 years ago by ★ 1.5k
0
votes
1
reply
11k
views
Comment: C: First time using maker
6.5 years ago by Rox ★ 1.5k
1
vote
1
reply
25k
views
Comment: C: Polish PacBio assembly with latest PacBio tools : an affordable solution for eve
6.6 years ago by Rox ★ 1.5k
0
votes
1
reply
11k
views
Comment: C: First time using maker
6.6 years ago by Rox ★ 1.5k
1
vote
1
reply
25k
views
Comment: C: Polish PacBio assembly with latest PacBio tools : an affordable solution for eve
6.6 years ago by Rox ★ 1.5k
0
votes
0
replies
10k
views
Comment: C: Remove adaptaters from ONT reads : An alternative to Porechop ?
6.7 years ago by Rox ★ 1.5k
0
votes
1
reply
10k
views
Comment: C: Remove adaptaters from ONT reads : An alternative to Porechop ?
6.7 years ago by Rox ★ 1.5k
0
votes
1
reply
10k
views
Comment: C: Remove adaptaters from ONT reads : An alternative to Porechop ?
6.7 years ago by Rox ★ 1.5k
0
votes
1
reply
11k
views
Comment: C: First time using maker
6.8 years ago by Rox ★ 1.5k
0
votes
0
replies
1.6k
views
Comment: C: Looking for a file : Complete Ref Seq Systematic Classification
6.9 years ago by Rox ★ 1.5k
3
votes
3
replies
1.6k
views
Looking for a file : Complete Ref Seq Systematic Classification
classification
updated 6.9 years ago by 5.3k • written 6.9 years ago by ★ 1.5k
0
votes
2
replies
3.0k
views
Comment: C: Using the right reference to identify sequences origin
6.9 years ago by Rox ★ 1.5k
0
votes
1
reply
3.0k
views
Comment: C: Using the right reference to identify sequences origin
6.9 years ago by Rox ★ 1.5k
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