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27
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9
replies
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How To Extract Set Of Reads From Fastq (Or Eventually Fasta And Qual) Based On List Of Ids?
extraction read 454 fastq fasta
updated 5 months ago by 148k • written 12.7 years ago by 3.2k
7
votes
9
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4.5k
views
lowercase fasta coordinates to GFF
lowercase fasta GFF
updated 2.7 years ago by 44k • written 9.8 years ago by 3.2k
0
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0
replies
3.1k
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Comment: C: Convert Phred score 41 to 40
updated 5.0 years ago by 44k • written 10.6 years ago by 3.2k
0
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0
replies
8.0k
views
Comment: C: Why is DNA split into many fragments before being sequenced by an Illumina seque
updated 5.0 years ago by 44k • written 10.6 years ago by 3.2k
0
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1
reply
2.4k
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Comment: C: Split merged BAM file
updated 5.0 years ago by 44k • written 10.6 years ago by 3.2k
0
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0
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3.8k
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Comment: C: First thing to do when you receive your sequenced genome of interest.
updated 5.0 years ago by 44k • written 10.6 years ago by 3.2k
2
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1
reply
9.9k
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Answer: A: Too late to switch to Bioinformatics?
updated 5.0 years ago by 44k • written 10.6 years ago by 3.2k
0
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1
reply
3.8k
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Answer: A: Generating Read Length?
updated 5.0 years ago by 44k • written 9.0 years ago by 3.2k
0
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1
reply
7.0k
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Comment: C: What is ref sequence name in BAM file header ?
updated 5.0 years ago by 44k • written 9.7 years ago by 3.2k
0
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1
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7.3k
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Answer: A: Illumina Mate Pair Read Duplication Level
updated 5.1 years ago by 44k • written 11.3 years ago by 3.2k
1
vote
1
reply
3.0k
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Comment: C: Running Galaxy tools locally using bx-python
updated 5.1 years ago by 44k • written 9.0 years ago by 3.2k
2
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0
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2.5k
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Answer: A: Identifying distance between mate pairs
updated 5.1 years ago by 44k • written 9.1 years ago by 3.2k
1
vote
1
reply
7.0k
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Comment: C: How to check whether a genome is circular
updated 5.1 years ago by 44k • written 9.2 years ago by 3.2k
1
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1
reply
3.2k
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Comment: C: Bioinformatics job to start.
updated 5.1 years ago by 44k • written 9.2 years ago by 3.2k
0
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1
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3.5k
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Comment: C: Where to download human alpha satellite from centromeric regions
updated 5.1 years ago by 44k • written 9.2 years ago by 3.2k
0
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1
reply
1.8k
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Comment: C: evaluation distance in Eukaryotic
updated 5.2 years ago by 44k • written 9.2 years ago by 3.2k
0
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1
reply
3.0k
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Comment: C: contigs alignment with long reads
updated 5.2 years ago by 44k • written 9.2 years ago by 3.2k
0
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1
reply
3.0k
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Comment: C: contigs alignment with long reads
updated 5.2 years ago by 44k • written 9.2 years ago by 3.2k
0
votes
1
reply
5.9k
views
Comment: C: reverse complement in Assembly!
updated 5.2 years ago by 44k • written 9.2 years ago by 3.2k
0
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1
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5.9k
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Answer: A: reverse complement in Assembly!
updated 5.2 years ago by 44k • written 9.2 years ago by 3.2k
0
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0
replies
1.5k
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identify length of repeat arrays with given motif
repeat trf length
updated 5.2 years ago by 20 • written 8.2 years ago by 3.2k
1
vote
1
reply
6.1k
views
Answer: A: Remove or mask repeat regions from .fasta file
updated 5.3 years ago by 44k • written 9.6 years ago by 3.2k
1
vote
1
reply
8.7k
views
Answer: Answer: Parse VCF file
updated 2.7 years ago by 44k • written 9.9 years ago by 3.2k
0
votes
3
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6.1k
views
Answer: A: Convert FASTQ to FASTA, filter, then convert filtered FASTA back into FASTQ
updated 5.3 years ago by 44k • written 10.1 years ago by 3.2k
0
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1
reply
6.5k
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Answer: A: bwa report multiple alignments
updated 5.3 years ago by 44k • written 10.4 years ago by 3.2k
1
vote
1
reply
2.4k
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Answer: A: Split merged BAM file
updated 5.3 years ago by 44k • written 10.6 years ago by 3.2k
0
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1
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3.2k
views
Comment: C: Can'T Find Indels With Samtools (Onyly Get Snps)
updated 5.3 years ago by 44k • written 10.8 years ago by 3.2k
1
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0
replies
5.8k
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Comment: C: Calculating Sequencing Depth Of A Genomic Region
updated 5.3 years ago by 44k • written 10.8 years ago by 3.2k
0
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0
replies
8.0k
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Comment: C: Go Component "Centromeric Region" Associated With Different Parts Of Chrs Of Ara
updated 5.3 years ago by 44k • written 12.8 years ago by 3.2k
0
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1
reply
2.5k
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Comment: C: What kind of systematic bias of sequencing data the following normalization proc
updated 6.3 years ago by 44k • written 8.9 years ago by 3.2k
0
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1
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2.2k
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identify long stretches of DNA that 2 sequences share with low similarity (>85%)
blastn
updated 2.0 years ago by 44k • written 9.6 years ago by 3.2k
3
votes
2
replies
2.1k
views
How Do 5` And 3` Ltr Regions Of Ltr Retrotransposon Look Like?
updated 6.7 years ago by 20 • written 13.2 years ago by 3.2k
3
votes
3
replies
1.9k
views
WGS data for healthy human women sequenced on Illumina HiSeq 2000?
wgs 1000g illumina hiseq
updated 6.8 years ago by 20 • written 7.3 years ago by 3.2k
0
votes
1
reply
2.8k
views
mpileup for PacBio reads
PacBio mpileup variants calling quiver
updated 7.1 years ago by ▴ 280 • written 7.8 years ago by 3.2k
0
votes
0
replies
1.8k
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Comment: C: positive selection project
7.2 years ago by Biomonika (Noolean) 3.2k
0
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0
replies
1.9k
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Comment: C: WGS data for healthy human women sequenced on Illumina HiSeq 2000?
7.3 years ago by Biomonika (Noolean) 3.2k
4
votes
4
replies
7.9k
views
Human transcriptome reference for RNASeq analysis
human transcriptome RNA-seq
updated 2.4 years ago by 44k • written 9.2 years ago by 3.2k
1
vote
1
reply
94k
views
Comment: C: Selecting Random Pairs From Fastq?
7.4 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
53k
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Comment: C: How To Split A Multiple Fasta
7.9 years ago by Biomonika (Noolean) 3.2k
0
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1
reply
2.8k
views
Comment: C: avoid within table correlations in rcorr
7.9 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
4.0k
views
Comment: C: Align short reads to multifasta reference - cant see in IGV
7.9 years ago by Biomonika (Noolean) 3.2k
3
votes
0
replies
4.8k
views
Answer: A: what do read with blue outline represent in IGV?
8.0 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
2.1k
views
Comment: C: Who is an appropriate person to ask for references while applying for PhD?
8.0 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
2.0k
views
Comment: C: Where does my RNASeq contamination fits on the Tree of Life?
8.0 years ago by Biomonika (Noolean) 3.2k
2
votes
4
replies
2.0k
views
Where does my RNASeq contamination fits on the Tree of Life?
RNA-Seq rna-seq contamination species algae
8.0 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
2.3k
views
Answer: A: how to replace dot as 'Missing' value for all columns using sed
8.2 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
2.6k
views
Comment: C: Uniting SRA Data into a single file
8.2 years ago by Biomonika (Noolean) 3.2k
2
votes
5
replies
4.8k
views
Different Runs Of Real Time Pcr, Comparing Expression Of All Genes According To Housekeeping Gene
pcr gene normalization
updated 8.2 years ago by 20 • written 13.0 years ago by 3.2k
0
votes
0
replies
1.9k
views
Comment: C: storage space for BAM files in the cloud, on the server, Galaxy or GenomeSpace
8.3 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
1.7k
views
Comment: C: total newbie staring into headlights
8.3 years ago by Biomonika (Noolean) 3.2k
445 results • Page 1 of 9
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