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Comment:
Comment: why 99% reads failed to align in mir-seq analysis?
20 months ago by
mohammadhassanj
▴ 260
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Comment:
Comment: why 99% reads failed to align in mir-seq analysis?
20 months ago by
mohammadhassanj
▴ 260
0
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2.3k
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Comment:
Comment: why 99% reads failed to align in mir-seq analysis?
20 months ago by
mohammadhassanj
▴ 260
0
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1
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2.3k
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Comment:
Comment: why 99% reads failed to align in mir-seq analysis?
20 months ago by
mohammadhassanj
▴ 260
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2.3k
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Comment:
Comment: why 99% reads failed to align in mir-seq analysis?
20 months ago by
mohammadhassanj
▴ 260
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1
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2.3k
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Comment:
Comment: why 99% reads failed to align in mir-seq analysis?
20 months ago by
mohammadhassanj
▴ 260
3
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12
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2.3k
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why 99% reads failed to align in mir-seq analysis?
Fastqc
bowtie1
miRNA-seq
alignment
differential-expression-analysis
20 months ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1.3k
views
Comment:
Comment: Is mir-seq reads quality good (Fastqc report) for DE analysis?
20 months ago by
mohammadhassanj
▴ 260
0
votes
1
reply
1.3k
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Comment:
Comment: Is mir-seq reads quality good (Fastqc report) for DE analysis?
21 months ago by
mohammadhassanj
▴ 260
3
votes
4
replies
1.3k
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Is mir-seq reads quality good (Fastqc report) for DE analysis?
transcriptome
Fastqc
miRNA-seq
differential-expression-analysis
RNA-seq
updated 21 months ago by
GenoMax
153k • written 21 months ago by
mohammadhassanj
▴ 260
0
votes
0
replies
663
views
Which of the following relationships is correct for making a hypothetical ceRNA?
cancer
lncRNA
ceRNA
RNA
miRNA
22 months ago by
mohammadhassanj
▴ 260
0
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1
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1.3k
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Comment:
Comment: Why are there several gene expression files (for example, miRNA) in TCGA for one
22 months ago by
mohammadhassanj
▴ 260
3
votes
3
replies
1.3k
views
Why are there several gene expression files (for example, miRNA) in TCGA for one case?
Differential-gene-expression
TCGA
miRNA
updated 17 months ago by
Ram
45k • written 22 months ago by
mohammadhassanj
▴ 260
0
votes
0
replies
931
views
Answer:
Answer: Heatmap / Gene List Similarity
2.3 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1.2k
views
Comment:
Comment: Retrieving information from COSMIC database in an automated way
2.3 years ago by
mohammadhassanj
▴ 260
0
votes
1
reply
1.3k
views
Comment:
Comment: To find amino acid substitution from fasta alignment
2.6 years ago by
mohammadhassanj
▴ 260
2
votes
1
reply
1.7k
views
Answer:
Answer: Can someone help me with searching overlapping values between two files?
2.6 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1.3k
views
Comment:
Comment: What technologies are needed to quickly produce a bioinformatics analysis platfo
2.6 years ago by
mohammadhassanj
▴ 260
0
votes
1
reply
1.3k
views
Comment:
Comment: What technologies are needed to quickly produce a bioinformatics analysis platfo
2.6 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
2.2k
views
Comment:
Comment: Protein protein interactions
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
1
reply
2.2k
views
Comment:
Comment: Protein protein interactions
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1.3k
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Comment:
Comment: best way to learn bash scripting
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
937
views
Comment:
Comment: expansions and contractions from OrthoFinder
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
883
views
Answer:
Answer: Transverse data
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
1
reply
1.1k
views
Comment:
Comment: Matching IDs between 3+ files and specifying output using dictionaries in Pytho
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
994
views
Answer:
Answer: Combine files that have partial filename matches
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
791
views
Comment:
Comment: expanding sequence
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1.1k
views
Comment:
Comment: Primer design scripts. OSError: Missing SEQUENCE tag
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1.1k
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Comment:
Comment: Reomve the first occurance of overalapping variants from VCF file
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
1
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1.1k
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Comment:
Comment: Reomve the first occurance of overalapping variants from VCF file
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
1
reply
1.2k
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Comment:
Comment: Get all isoforms and proteins that correspond to list of Trinity gene IDs
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
788
views
Comment:
Comment: Identifying whether a sequence is Novel or not
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
0
replies
1.5k
views
Comment:
Comment: Removing (stubborn) new line from Fasta file sequence?
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
925
views
Comment:
Comment: Extract pre-mirna using sliding window.
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
0
replies
2.6k
views
Answer:
Answer: PennCNV - How to remove samples at once.
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
2.1k
views
Comment:
Comment: Change a dataset of variants into binary form?
2.7 years ago by
mohammadhassanj
▴ 260
2
votes
1
reply
2.1k
views
Comment:
Comment: Change a dataset of variants into binary form?
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
948
views
Comment:
Comment: removing a word from a .vcf
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
1
reply
2.6k
views
Comment:
Comment: PennCNV - How to remove samples at once.
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
1
reply
2.6k
views
Comment:
Comment: PennCNV - How to remove samples at once.
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
1
reply
2.6k
views
Comment:
Comment: PennCNV - How to remove samples at once.
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
1
reply
2.2k
views
Comment:
Comment: How can I run multiple sequence alignment for a large number of proteins (~10k)
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
0
replies
1.3k
views
Answer:
Answer: Question regarding miRNA target gene prediction
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1000
views
Comment:
Comment: find mouse homologs to human long non coding rnas
2.7 years ago by
mohammadhassanj
▴ 260
1
vote
0
replies
1.8k
views
Comment:
Comment: Parse error in Autodock Vina
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
2.4k
views
Comment:
Comment: bowtie2, and python script
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
3.8k
views
Comment:
Comment: speeding up bcftools view
updated 2.7 years ago by
Ram
45k • written 2.7 years ago by
mohammadhassanj
▴ 260
1
vote
0
replies
3.2k
views
Comment:
Comment: gene symbol not showing for ensembl gene ids using biomart
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
2.0k
views
Answer:
Answer: batch sequence retrieval using exon coordinates
2.7 years ago by
mohammadhassanj
▴ 260
0
votes
0
replies
1.6k
views
Answer:
Answer: genomic and regional diversity of bacteria
updated 2.6 years ago by
Ram
45k • written 2.7 years ago by
mohammadhassanj
▴ 260
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