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Comment: Comment: why 99% reads failed to align in mir-seq analysis?
4 months ago by mohammadhassanj ▴ 260
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Comment: Comment: why 99% reads failed to align in mir-seq analysis?
4 months ago by mohammadhassanj ▴ 260
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Comment: Comment: why 99% reads failed to align in mir-seq analysis?
4 months ago by mohammadhassanj ▴ 260
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Comment: Comment: why 99% reads failed to align in mir-seq analysis?
4 months ago by mohammadhassanj ▴ 260
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Comment: Comment: why 99% reads failed to align in mir-seq analysis?
4 months ago by mohammadhassanj ▴ 260
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Comment: Comment: why 99% reads failed to align in mir-seq analysis?
4 months ago by mohammadhassanj ▴ 260
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12
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1.0k
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why 99% reads failed to align in mir-seq analysis?
Fastqc bowtie1 miRNA-seq alignment differential-expression-analysis
4 months ago by mohammadhassanj ▴ 260
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567
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Comment: Comment: Is mir-seq reads quality good (Fastqc report) for DE analysis?
4 months ago by mohammadhassanj ▴ 260
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567
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Comment: Comment: Is mir-seq reads quality good (Fastqc report) for DE analysis?
4 months ago by mohammadhassanj ▴ 260
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4
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567
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Is mir-seq reads quality good (Fastqc report) for DE analysis?
transcriptome Fastqc miRNA-seq differential-expression-analysis RNA-seq
updated 4 months ago by 142k • written 4 months ago by ▴ 260
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281
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Which of the following relationships is correct for making a hypothetical ceRNA?
cancer lncRNA ceRNA RNA miRNA
6 months ago by mohammadhassanj ▴ 260
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677
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Comment: Comment: Why are there several gene expression files (for example, miRNA) in TCGA for one
6 months ago by mohammadhassanj ▴ 260
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3
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Why are there several gene expression files (for example, miRNA) in TCGA for one case?
Differential-gene-expression TCGA miRNA
updated 6 weeks ago by 44k • written 6 months ago by ▴ 260
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Answer: Answer: Heatmap / Gene List Similarity
11 months ago by mohammadhassanj ▴ 260
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Comment: Comment: Retrieving information from COSMIC database in an automated way
12 months ago by mohammadhassanj ▴ 260
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724
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Comment: Comment: To find amino acid substitution from fasta alignment
15 months ago by mohammadhassanj ▴ 260
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1
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1.0k
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Answer: Answer: Can someone help me with searching overlapping values between two files?
15 months ago by mohammadhassanj ▴ 260
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717
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Comment: Comment: What technologies are needed to quickly produce a bioinformatics analysis platfo
15 months ago by mohammadhassanj ▴ 260
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1
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717
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Comment: Comment: What technologies are needed to quickly produce a bioinformatics analysis platfo
15 months ago by mohammadhassanj ▴ 260
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1.4k
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Comment: Comment: Protein protein interactions
15 months ago by mohammadhassanj ▴ 260
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1.4k
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Comment: Comment: Protein protein interactions
15 months ago by mohammadhassanj ▴ 260
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779
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Comment: Comment: best way to learn bash scripting
16 months ago by mohammadhassanj ▴ 260
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539
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Comment: Comment: expansions and contractions from OrthoFinder
16 months ago by mohammadhassanj ▴ 260
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460
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Answer: Answer: Transverse data
16 months ago by mohammadhassanj ▴ 260
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1
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634
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Comment: Comment: Matching IDs between 3+ files and specifying output using dictionaries in Pytho
16 months ago by mohammadhassanj ▴ 260
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531
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Answer: Answer: Combine files that have partial filename matches
16 months ago by mohammadhassanj ▴ 260
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450
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Comment: Comment: expanding sequence
16 months ago by mohammadhassanj ▴ 260
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644
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Comment: Comment: Primer design scripts. OSError: Missing SEQUENCE tag
16 months ago by mohammadhassanj ▴ 260
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649
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Comment: Comment: Reomve the first occurance of overalapping variants from VCF file
16 months ago by mohammadhassanj ▴ 260
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649
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Comment: Comment: Reomve the first occurance of overalapping variants from VCF file
16 months ago by mohammadhassanj ▴ 260
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695
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Comment: Comment: Get all isoforms and proteins that correspond to list of Trinity gene IDs
16 months ago by mohammadhassanj ▴ 260
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436
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Comment: Comment: Identifying whether a sequence is Novel or not
16 months ago by mohammadhassanj ▴ 260
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788
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Comment: Comment: Removing (stubborn) new line from Fasta file sequence?
16 months ago by mohammadhassanj ▴ 260
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558
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Comment: Comment: Extract pre-mirna using sliding window.
16 months ago by mohammadhassanj ▴ 260
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1.6k
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Answer: Answer: PennCNV - How to remove samples at once.
16 months ago by mohammadhassanj ▴ 260
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0
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1.3k
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Comment: Comment: Change a dataset of variants into binary form?
16 months ago by mohammadhassanj ▴ 260
2
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1.3k
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Comment: Comment: Change a dataset of variants into binary form?
16 months ago by mohammadhassanj ▴ 260
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551
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Comment: Comment: removing a word from a .vcf
16 months ago by mohammadhassanj ▴ 260
1
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1
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1.6k
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Comment: Comment: PennCNV - How to remove samples at once.
16 months ago by mohammadhassanj ▴ 260
1
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1
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1.6k
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Comment: Comment: PennCNV - How to remove samples at once.
16 months ago by mohammadhassanj ▴ 260
1
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1
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1.6k
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Comment: Comment: PennCNV - How to remove samples at once.
16 months ago by mohammadhassanj ▴ 260
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1
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1.1k
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Comment: Comment: How can I run multiple sequence alignment for a large number of proteins (~10k)
16 months ago by mohammadhassanj ▴ 260
1
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0
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722
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Answer: Answer: Question regarding miRNA target gene prediction
16 months ago by mohammadhassanj ▴ 260
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547
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Comment: Comment: find mouse homologs to human long non coding rnas
16 months ago by mohammadhassanj ▴ 260
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Comment: Comment: Parse error in Autodock Vina
16 months ago by mohammadhassanj ▴ 260
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1.5k
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Comment: Comment: bowtie2, and python script
16 months ago by mohammadhassanj ▴ 260
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1.9k
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Comment: Comment: speeding up bcftools view
updated 16 months ago by 44k • written 16 months ago by ▴ 260
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1.8k
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Comment: Comment: gene symbol not showing for ensembl gene ids using biomart
16 months ago by mohammadhassanj ▴ 260
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1.2k
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Answer: Answer: batch sequence retrieval using exon coordinates
16 months ago by mohammadhassanj ▴ 260
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0
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1.1k
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Answer: Answer: genomic and regional diversity of bacteria
updated 15 months ago by 44k • written 16 months ago by ▴ 260
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