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Comment: Comment: is there any way to normalize the counts and compare it for the splicing quantif
7 months ago by PK ▴ 130
2
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2
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738
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is there any way to normalize the counts and compare it for the splicing quantification?
majiq splicing rmats
7 months ago by PK ▴ 130
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1.2k
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Comment: Comment: can someone please explain the DAPARS output?
13 months ago by PK ▴ 130
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1.2k
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Comment: Comment: can someone please explain the DAPARS output?
13 months ago by PK ▴ 130
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4
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1.2k
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can someone please explain the DAPARS output?
RNA-seq APA DaPars2
13 months ago by PK ▴ 130
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1.1k
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Comment: Comment: Is there any EnsEMBL 90 transcript annotations?
13 months ago by PK ▴ 130
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1.1k
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Comment: Comment: Is there any EnsEMBL 90 transcript annotations?
13 months ago by PK ▴ 130
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1
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1.1k
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Comment: Comment: Is there any EnsEMBL 90 transcript annotations?
13 months ago by PK ▴ 130
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6
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1.1k
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Is there any EnsEMBL 90 transcript annotations?
GTF cgat RNA-Seq
13 months ago by PK ▴ 130
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0
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462
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rMATS reports zero evenets?
splicing RNA-Seq rmats
18 months ago by PK ▴ 130
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0
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382
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How to calculate weighted transcript length for each gene?
salmon tximport rna-seq
updated 18 months ago by 45k • written 18 months ago by ▴ 130
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0
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871
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Comment: Comment: Error from cgat gtf2gtf --method=genes-to-unique-chunks
19 months ago by PK ▴ 130
2
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2
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871
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Error from cgat gtf2gtf --method=genes-to-unique-chunks
RNA-Seq GTF cgat
19 months ago by PK ▴ 130
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0
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575
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Comment: Comment: IntronicParts vs. intronsByTranscript
19 months ago by PK ▴ 130
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0
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1.8k
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Comment: Comment: Featurecounts has more reads than star assigned reads ?
20 months ago by PK ▴ 130
4
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5
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1.8k
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Featurecounts has more reads than star assigned reads ?
featurecounts STAR RNA-seq
20 months ago by PK ▴ 130
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0
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1.8k
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Comment: Comment: Featurecounts has more reads than star assigned reads ?
20 months ago by PK ▴ 130
2
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1
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759
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How to normalize intron counts?
DESeq limma RNA-SEQ
updated 2.2 years ago by 10k • written 2.2 years ago by ▴ 130
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0
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2.2k
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Comment: Comment: Is it possible to use salmon alevin tool for total rna seq samples?
2.3 years ago by PK ▴ 130
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1
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2.2k
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Comment: Comment: Is it possible to use salmon alevin tool for total rna seq samples?
2.3 years ago by PK ▴ 130
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1
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2.2k
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Comment: Comment: Is it possible to use salmon alevin tool for total rna seq samples?
2.3 years ago by PK ▴ 130
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1
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2.2k
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Comment: Comment: Is it possible to use salmon alevin tool for total rna seq samples?
2.3 years ago by PK ▴ 130
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8
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2.2k
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Is it possible to use salmon alevin tool for total rna seq samples?
salmon alignment
2.3 years ago by PK ▴ 130
1
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1
reply
769
views
weird behaviour on bedtools
bedtools RNA-Seq
updated 2.3 years ago by 45k • written 2.3 years ago by ▴ 130
1
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0
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795
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How to calculate Exon-Intron junction perbase coverage?
RNA-Seq bedtools
2.5 years ago by PK ▴ 130
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0
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512
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Reference book for clip seq analysis?
RNASEQ clipseq R
2.5 years ago by PK ▴ 130
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0
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1.1k
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Comment: Comment: Strand-specific in HT-Seq
2.6 years ago by PK ▴ 130
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0
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524
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How to normalize the counts when you are looking at 3'UTR?
bedtools RNA-Seq
updated 2.3 years ago by 45k • written 2.6 years ago by ▴ 130
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0
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1.1k
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Comment: Comment: Metagene for first last and intermediate exons?
2.7 years ago by PK ▴ 130
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2
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1.1k
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Metagene for first last and intermediate exons?
ggplot Rna-seq deeptools r
updated 2.3 years ago by 45k • written 2.7 years ago by ▴ 130
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1
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1.4k
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how to create a metagene plot for different features of genes?
metagene RNA-Seq deeptools R
updated 2.8 years ago by 11k • written 2.8 years ago by ▴ 130
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1
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1.0k
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Comment: Comment: How to plot that the certain exons are affected in the genebody?
2.8 years ago by PK ▴ 130
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3
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1.0k
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How to plot that the certain exons are affected in the genebody?
RNA-seq
updated 2.8 years ago by 45k • written 2.8 years ago by ▴ 130
1
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1
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726
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How to handle multiple overlap and choose closest one?
RNA-Seq bedtools
updated 2.8 years ago by 166k • written 2.8 years ago by ▴ 130
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0
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2.0k
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Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
2.8 years ago by PK ▴ 130
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0
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2.8k
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Comment: Comment: Counting gene vs exons in featureCounts
2.9 years ago by PK ▴ 130
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0
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4.6k
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Comment: Comment: How to extract intron counts from total RNA Sequencing?
2.9 years ago by PK ▴ 130
0
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1
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4.6k
views
Comment: Comment: How to extract intron counts from total RNA Sequencing?
2.9 years ago by PK ▴ 130
0
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1
reply
4.6k
views
Comment: Comment: How to extract intron counts from total RNA Sequencing?
2.9 years ago by PK ▴ 130
0
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0
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4.6k
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Comment: Comment: How to extract intron counts from total RNA Sequencing?
2.9 years ago by PK ▴ 130
0
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1
reply
4.6k
views
Comment: Comment: How to extract intron counts from total RNA Sequencing?
2.9 years ago by PK ▴ 130
0
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1
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4.6k
views
Comment: Comment: How to extract intron counts from total RNA Sequencing?
2.9 years ago by PK ▴ 130
5
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16
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4.6k
views
How to extract intron counts from total RNA Sequencing?
featurecounts RNAseq htseq STAR
2.9 years ago by PK ▴ 130
0
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1
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4.6k
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Comment: Comment: How to extract intron counts from total RNA Sequencing?
2.9 years ago by PK ▴ 130
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0
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2.4k
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Comment: Comment: What is the advantage of mapping RNA-Seq against genome?
2.9 years ago by PK ▴ 130
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1
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2.4k
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Comment: Comment: What is the advantage of mapping RNA-Seq against genome?
2.9 years ago by PK ▴ 130
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1
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2.4k
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Comment: Comment: What is the advantage of mapping RNA-Seq against genome?
2.9 years ago by PK ▴ 130
4
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7
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2.4k
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What is the advantage of mapping RNA-Seq against genome?
RNA-SEQ mapping
2.9 years ago by PK ▴ 130
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0
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638
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can i use repeat masker gff file to directly extract the counts from fastq files?
repeat base masker rep
3.0 years ago by PK ▴ 130
0
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0
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590
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How to generate gene body coverage plot for tRNA?
clipseq peak-calling RNA-seq samtools
updated 2.3 years ago by 45k • written 3.1 years ago by ▴ 130
149 results • Page 1 of 3
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