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672
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Braker2 with filtered BAM files
assembly gene sequencing rna-seq
5.9 years ago by Ric ▴ 440
0
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0
replies
9.8k
views
Comment: C: Ignore Reads In Bwa
updated 5.9 years ago by 45k • written 13.5 years ago by ▴ 440
3
votes
2
replies
1.9k
views
StringTie to GFF3
gene assembly RNA-Seq
updated 6.0 years ago by 9.3k • written 6.0 years ago by ▴ 440
0
votes
0
replies
1.2k
views
Comment: C: Concatenating default BLAST ouputs
6.0 years ago by Ric ▴ 440
1
vote
4
replies
1.2k
views
Concatenating default BLAST ouputs
alignment blast
6.0 years ago by Ric ▴ 440
0
votes
1
reply
3.5k
views
Comment: C: Annotation lifting to a different organism
6.0 years ago by Ric ▴ 440
0
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0
replies
10.0k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
6.0 years ago by Ric ▴ 440
0
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1
reply
10.0k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
6.0 years ago by Ric ▴ 440
0
votes
1
reply
10.0k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
6.0 years ago by Ric ▴ 440
0
votes
1
reply
3.5k
views
Comment: C: Annotation lifting to a different organism
6.0 years ago by Ric ▴ 440
0
votes
1
reply
10.0k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
6.0 years ago by Ric ▴ 440
3
votes
13
replies
3.5k
views
Annotation lifting to a different organism
gene assembly
updated 6.0 years ago by 9.3k • written 6.1 years ago by ▴ 440
0
votes
2
replies
10.0k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
updated 3.0 years ago by 9.3k • written 6.0 years ago by ▴ 440
0
votes
0
replies
3.5k
views
Comment: C: Annotation lifting to a different organism
6.0 years ago by Ric ▴ 440
0
votes
1
reply
3.5k
views
Comment: C: Annotation lifting to a different organism
6.0 years ago by Ric ▴ 440
0
votes
1
reply
9.7k
views
Comment: C: How to get fasta sequences of features from a GFF3 file?
6.1 years ago by Ric ▴ 440
0
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2
replies
3.5k
views
Comment: C: Filtering GFF3 file
6.1 years ago by Ric ▴ 440
0
votes
4
replies
3.5k
views
Filtering GFF3 file
gffutils python gff3 annotation
6.1 years ago by Ric ▴ 440
1
vote
2
replies
1.5k
views
GFF3 annotation filtering
gene genome
updated 6.1 years ago by ★ 2.4k • written 6.1 years ago by ▴ 440
0
votes
1
reply
3.5k
views
Comment: C: Annotation lifting to a different organism
6.1 years ago by Ric ▴ 440
0
votes
1
reply
2.8k
views
Comment: C: MergeSamFiles: Alignments added out of order in SAMFileWriterImpl.addAlignment f
6.1 years ago by Ric ▴ 440
1
vote
5
replies
2.8k
views
MergeSamFiles: Alignments added out of order in SAMFileWriterImpl.addAlignment for null
alignment
6.1 years ago by Ric ▴ 440
0
votes
0
replies
1.4k
views
Comment: C: BioNano fasta file formatting issue
6.2 years ago by Ric ▴ 440
0
votes
0
replies
762
views
Trinotate sqlite and gene_to_trans_map
RNA-Seq
6.2 years ago by Ric ▴ 440
2
votes
2
replies
1.4k
views
BRAKER miss some genes despite of RNA-Seq evidence
RNA-Seq genome Assembly BRAKER
updated 6.2 years ago by 89k • written 6.2 years ago by ▴ 440
0
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2
replies
1.4k
views
Comment: C: BioNano fasta file formatting issue
6.2 years ago by Ric ▴ 440
0
votes
5
replies
1.4k
views
BioNano fasta file formatting issue
assembly sequence genome
6.2 years ago by Ric ▴ 440
7
votes
3
replies
7.9k
views
How to circularize genome assemblies
assembly genome
updated 6.2 years ago by ★ 2.1k • written 7.4 years ago by ▴ 440
1
vote
1
reply
1.5k
views
Visualizing Orthologs and Paralogs genes
orthologs paralogs circos Visualizing gene
6.3 years ago by Ric ▴ 440
3
votes
1
reply
1.9k
views
Retraining Augustus for UTR
gene annotation
updated 6.4 years ago by 20 • written 6.4 years ago by ▴ 440
0
votes
1
reply
5.9k
views
Comment: C: Retraining Augustus with BUSCO
6.4 years ago by Ric ▴ 440
0
votes
1
reply
5.9k
views
Comment: C: Retraining Augustus with BUSCO
6.4 years ago by Ric ▴ 440
3
votes
5
replies
5.9k
views
Retraining Augustus with BUSCO
Assembly gene annotation
6.4 years ago by Ric ▴ 440
0
votes
2
replies
3.1k
views
Comment: C: splitting a SAM file
6.4 years ago by Ric ▴ 440
0
votes
0
replies
711
views
Only 1 linkage group after filtering MSTmap result
alignment snp genetic linkage map
6.4 years ago by Ric ▴ 440
0
votes
1
reply
3.1k
views
Comment: C: splitting a SAM file
6.4 years ago by Ric ▴ 440
9
votes
10
replies
3.1k
views
splitting a SAM file
alignment
updated 6.4 years ago by 48k • written 6.4 years ago by ▴ 440
0
votes
2
replies
1.5k
views
Gene clustering with OrthoMCL
gene cluster rna-seq protein
6.4 years ago by Ric ▴ 440
0
votes
0
replies
1.0k
views
Comment: C: faSize caused expandFaFastBuf
6.4 years ago by Ric ▴ 440
0
votes
2
replies
1.0k
views
faSize caused expandFaFastBuf
Assembly sequencing software error
6.5 years ago by Ric ▴ 440
0
votes
0
replies
92k
views
Comment: C: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
6.5 years ago by Ric ▴ 440
7
votes
6
replies
3.2k
views
Peak caller for broad peaks, replicates and paired-end reads
ChIP-Seq
updated 6.6 years ago by ▴ 310 • written 9.5 years ago by ▴ 440
0
votes
1
reply
24k
views
Comment: C: bwa mem: Passing a variable to read group
6.6 years ago by Ric ▴ 440
3
votes
7
replies
2.9k
views
bowtie2-align died with signal 6 (ABRT) (core dumped)
RNA-Seq alignment
updated 6.7 years ago by 20 • written 6.8 years ago by ▴ 440
0
votes
1
reply
1.1k
views
vcf to venn diagram
snp
6.7 years ago by Ric ▴ 440
0
votes
2
replies
4.7k
views
Failed to open var.raw.bcf: unknown file type
snp
updated 6.7 years ago by 166k • written 6.7 years ago by ▴ 440
0
votes
1
reply
3.3k
views
Comment: C: converting fast5 to fasta failed
6.8 years ago by Ric ▴ 440
0
votes
0
replies
3.3k
views
Comment: C: converting fast5 to fasta failed
6.8 years ago by Ric ▴ 440
1
vote
5
replies
3.3k
views
converting fast5 to fasta failed
sequence
updated 6.8 years ago by ▴ 50 • written 6.8 years ago by ▴ 440
0
votes
1
reply
2.7k
views
Comment: C: Using flowcell name as file name for FASTQ file
6.8 years ago by Ric ▴ 440
295 results • Page 3 of 6
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