User: GouthamAtla

8

votes

11

replies

2.1k

views

scRNA RNA-Seq salmon star

3.8 years ago by GouthamAtla 12k

105

votes

15

replies

112k

views

16 follow

gtf gff

updated 5 weeks ago by xiaoleiusc ▴ 140 • written 11.9 years ago by GouthamAtla 12k

24

votes

11

replies

33k

views

samtools picard markduplicates illumina paired-end

updated 4.5 years ago by Nitha ▴ 20 • written 10.5 years ago by GouthamAtla 12k

2

votes

3

replies

3.0k

views

RNA-Seq bowtie2 STAR

5.1 years ago by GouthamAtla 12k

0

votes

4

replies

2.5k

views

RNA-Seq annotations

updated 23 months ago by Ram 43k • written 9.1 years ago by GouthamAtla 12k

13

votes

12

replies

34k

views

picard alignment paired-end

updated 7 months ago by Ram 43k • written 10.2 years ago by GouthamAtla 12k

0

votes

0

replies

1.1k

views

genomics ChIP-Seq RNA-Seq qsmooth

6.5 years ago by GouthamAtla 12k

0

votes

4

replies

1.7k

views

RNA-Seq

updated 7.4 years ago by Matteo Schiavinato ★ 3.6k • written 7.4 years ago by GouthamAtla 12k

26

votes

8

replies

6.0k

views

7 follow

ngs

updated 14 months ago by Ram 43k • written 10.6 years ago by GouthamAtla 12k

1

vote

7

replies

2.7k

views

bedtools

updated 21 months ago by Ram 43k • written 8.2 years ago by GouthamAtla 12k

1

vote

3

replies

12k

views

pysam pileup

updated 21 months ago by Ram 43k • written 8.3 years ago by GouthamAtla 12k

4

votes

6

replies

3.0k

views

freebayes GATK SNP vcf

8.3 years ago by GouthamAtla 12k

3

votes

2

replies

4.1k

views

RNA-Seq ChIP-Seq

updated 20 months ago by Ram 43k • written 8.4 years ago by GouthamAtla 12k

1

vote

6

replies

4.5k

views

VCF SNP

updated 2.5 years ago by Ram 43k • written 9.9 years ago by GouthamAtla 12k

0

votes

0

replies

2.5k

views

RUVSeq RNA-Seq

updated 17 months ago by Ram 43k • written 8.8 years ago by GouthamAtla 12k

0

votes

1

reply

2.4k

views

tophat2 cufflinks rna-seq

updated 21 months ago by Ram 43k • written 9.0 years ago by GouthamAtla 12k

6

votes

10

replies

5.4k

views

RNA-Seq tophat2 trinity

updated 21 months ago by Ram 43k • written 9.0 years ago by GouthamAtla 12k

1

vote

1

reply

7.4k

views

msa alignments

updated 3.0 years ago by Ram 43k • written 9.2 years ago by GouthamAtla 12k

1

vote

6

replies

2.8k

views

dna-seq simulations

updated 23 months ago by Ram 43k • written 9.1 years ago by GouthamAtla 12k

0

votes

1

reply

2.4k

views

bed chip-seq

updated 9.2 years ago by Biostar 20 • written 11.9 years ago by GouthamAtla 12k

1

vote

4

replies

2.9k

views

genome bedtools

updated 2.1 years ago by Ram 43k • written 9.3 years ago by GouthamAtla 12k

2

votes

5

replies

4.7k

views

pybedtools python bedtools

updated 2.0 years ago by Ram 43k • written 9.2 years ago by GouthamAtla 12k

6

votes

8

replies

15k

views

vcf structure population-genetics

updated 2.1 years ago by Ram 43k • written 9.3 years ago by GouthamAtla 12k

2

votes

3

replies

2.6k

views

SNP mpileup samtools

updated 2.1 years ago by Ram 43k • written 9.4 years ago by GouthamAtla 12k

7

votes

7

replies

12k

views

blast ncbi

updated 2.2 years ago by Ram 43k • written 9.5 years ago by GouthamAtla 12k

1

vote

2

replies

2.4k

views

tophat cuffdiff RNA-Seq

updated 3.1 years ago by Ram 43k • written 9.5 years ago by GouthamAtla 12k

3

votes

9

replies

3.9k

views

Ensembl API perl

updated 2.3 years ago by Ram 43k • written 9.6 years ago by GouthamAtla 12k

0

votes

5

replies

3.5k

views

bowtie2 samtools alignment

updated 2.4 years ago by Ram 43k • written 9.7 years ago by GouthamAtla 12k

2

votes

2

replies

2.7k

views

ECTools pacbio Assembly

updated 2.5 years ago by Ram 43k • written 9.8 years ago by GouthamAtla 12k

10

votes

6

replies

13k

views

edger deseq rnaseq differential-expression rna-seq tophat2

updated 2.5 years ago by Ram 43k • written 10.2 years ago by GouthamAtla 12k

0

votes

2

replies

2.4k

views

paralogs Fastq

updated 2.6 years ago by Ram 43k • written 10.0 years ago by GouthamAtla 12k

8

votes

2

replies

7.2k

views

alignment miRNA RNA-Seq

updated 2.6 years ago by Ram 43k • written 10.0 years ago by GouthamAtla 12k

0

votes

1

reply

3.5k

views

cufflinks tophat2 gtf

updated 10.0 years ago by andrew.j.skelton73 6.5k • written 10.0 years ago by GouthamAtla 12k

1

vote

2

replies

3.2k

views

gatk

updated 10.1 years ago by favero.francesco ▴ 120 • written 10.1 years ago by GouthamAtla 12k

1

vote

4

replies

2.7k

views

galaxy pipeline

updated 10.2 years ago by martenson ▴ 380 • written 10.2 years ago by GouthamAtla 12k

11

votes

5

replies

5.0k

views

parallel linux bedtools bash

updated 10.2 years ago by ole.tange ★ 4.4k • written 10.2 years ago by GouthamAtla 12k

2

votes

2

replies

3.9k

views

cufflinks tophat2 rna-seq cuffdiff rnaseq fpkm rpkm

updated 10.2 years ago by Istvan Albert 100k • written 10.2 years ago by GouthamAtla 12k

19

votes

10

replies

9.6k

views

tophat2 bowtie2

updated 10.2 years ago by Devon Ryan 104k • written 10.2 years ago by GouthamAtla 12k

0

votes

3

replies

3.8k

views

rna-seq tophat2

10.3 years ago by GouthamAtla 12k

2

votes

2

replies

3.4k

views

genome multiple-alignment

10.5 years ago by GouthamAtla 12k

4

votes

4

replies

3.1k

views

pdb perl format

updated 10.7 years ago by David Westergaard ★ 1.5k • written 10.7 years ago by GouthamAtla 12k

2

votes

2

replies

2.0k

views

genome ngs

updated 11.1 years ago by Istvan Albert 100k • written 11.1 years ago by GouthamAtla 12k

3

votes

1

reply

7.5k

views

genome

updated 11.2 years ago by JC 13k • written 11.2 years ago by GouthamAtla 12k

5

votes

12

replies

2.6k

views

perl

updated 11.2 years ago by SES 8.6k • written 11.2 years ago by GouthamAtla 12k

3

votes

2

replies

4.0k

views

chip-seq bed

updated 11.9 years ago by Alex Reynolds 35k • written 11.9 years ago by GouthamAtla 12k