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0
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2
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3.0k
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Sleuth_fit error "`Error in if (sum(valid) == 0) { : missing value where TRUE/FALSE needed"
R rna-seq software error Assembly
updated 14 months ago by ▴ 320 • written 5.3 years ago by ▴ 470
2
votes
1
reply
490
views
Liftover using gVCF
genome assembly GATK liftover
updated 15 months ago by ★ 4.6k • written 15 months ago by ▴ 470
3
votes
4
replies
2.1k
views
Error: htsjdk.tribble.TribbleExpection: The provided VCF file is malformed at approximately line number 5880: Duplicate allele added to VariantContex…
SNP genome next-gen Assembly
updated 16 months ago by • 0 • written 2.2 years ago by ▴ 470
0
votes
1
reply
470
views
Running SnpSift in parallel
VCF WGS Annotation
updated 18 months ago by 153k • written 18 months ago by ▴ 470
0
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0
replies
666
views
Comment: Comment: Case Control count per variant
19 months ago by williamsbrian5064 ▴ 470
0
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1
reply
666
views
Comment: Comment: Case Control count per variant
19 months ago by williamsbrian5064 ▴ 470
1
vote
4
replies
666
views
Case Control count per variant
WGS VCF Annotation NGS
19 months ago by williamsbrian5064 ▴ 470
0
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1
reply
1.5k
views
Comment: Comment: Get REVEL plugin started with VEP
20 months ago by williamsbrian5064 ▴ 470
0
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3
replies
793
views
Comment: Comment: How to calculate combined expression of two genes
23 months ago by williamsbrian5064 ▴ 470
4
votes
5
replies
793
views
How to calculate combined expression of two genes
R rna-seq
updated 23 months ago by 84k • written 23 months ago by ▴ 470
3
votes
4
replies
1.6k
views
GATK markduplicates out of memory
Assembly WGS MarkDuplicates GATK
updated 23 months ago by 153k • written 23 months ago by ▴ 470
0
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1
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1.6k
views
Comment: Comment: GATK markduplicates out of memory
23 months ago by williamsbrian5064 ▴ 470
6
votes
2
replies
1.4k
views
bcftools vcf2sex
genomics genome alignment genotyping
updated 2.0 years ago by ★ 1.2k • written 2.0 years ago by ▴ 470
0
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1
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1.7k
views
Comment: C: PLINK:Error: Variant '.' is not biallelic. To obtain a full list of merge failur
2.0 years ago by williamsbrian5064 ▴ 470
0
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0
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1.7k
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Comment: C: PLINK:Error: Variant '.' is not biallelic. To obtain a full list of merge failur
2.0 years ago by williamsbrian5064 ▴ 470
3
votes
5
replies
1.7k
views
PLINK:Error: Variant '.' is not biallelic. To obtain a full list of merge failures
SNP Assembly genome next-gen
2.0 years ago by williamsbrian5064 ▴ 470
0
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1
reply
2.1k
views
Comment: C: bcftools +fill-tag does not work in loop
2.0 years ago by williamsbrian5064 ▴ 470
0
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0
replies
1.4k
views
Comment: C: Minor allele count report with --freq count in PLINK2
2.0 years ago by williamsbrian5064 ▴ 470
0
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1
reply
2.1k
views
Comment: C: bcftools +fill-tag does not work in loop
2.0 years ago by williamsbrian5064 ▴ 470
0
votes
0
replies
1.1k
views
Comment: C: Remove Chr:position format to just Chr
2.0 years ago by williamsbrian5064 ▴ 470
1
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1
reply
1.1k
views
Comment: C: Remove Chr:position format to just Chr
2.0 years ago by williamsbrian5064 ▴ 470
0
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0
replies
1.1k
views
Comment: C: Remove Chr:position format to just Chr
2.0 years ago by williamsbrian5064 ▴ 470
0
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1
reply
1.4k
views
Comment: C: Minor allele count report with --freq count in PLINK2
2.0 years ago by williamsbrian5064 ▴ 470
1
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2
replies
1.1k
views
Answer: A: Remove Chr:position format to just Chr
2.0 years ago by williamsbrian5064 ▴ 470
0
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0
replies
1.1k
views
Comment: C: Remove Chr:position format to just Chr
2.0 years ago by williamsbrian5064 ▴ 470
0
votes
1
reply
701
views
Answer: A: Get TSS information from GFF3 file depending on strand
2.0 years ago by williamsbrian5064 ▴ 470
2
votes
0
replies
357
views
Comment: C: Different symbols in genotype field in VCF files
2.0 years ago by williamsbrian5064 ▴ 470
0
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0
replies
2.3k
views
Comment: C: Remove uncharacterized chromosomes from reference fasta file
2.0 years ago by williamsbrian5064 ▴ 470
0
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0
replies
2.3k
views
Comment: C: Remove uncharacterized chromosomes from reference fasta file
2.0 years ago by williamsbrian5064 ▴ 470
3
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1
reply
2.3k
views
Comment: C: Remove uncharacterized chromosomes from reference fasta file
2.0 years ago by williamsbrian5064 ▴ 470
15
votes
7
replies
2.3k
views
Remove uncharacterized chromosomes from reference fasta file
Assembly genome sequence next-gen
updated 2.0 years ago by 11k • written 2.0 years ago by ▴ 470
0
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0
replies
2.0k
views
Comment: C: How to sort fasta file numerically
2.1 years ago by williamsbrian5064 ▴ 470
0
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0
replies
2.0k
views
Comment: C: How to sort fasta file numerically
2.1 years ago by williamsbrian5064 ▴ 470
0
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1
reply
2.0k
views
Comment: C: How to sort fasta file numerically
2.1 years ago by williamsbrian5064 ▴ 470
0
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1
reply
2.0k
views
Comment: C: How to sort fasta file numerically
2.1 years ago by williamsbrian5064 ▴ 470
8
votes
8
replies
2.0k
views
How to sort fasta file numerically
Assembly genome sequence
updated 2.1 years ago by 70k • written 2.1 years ago by ▴ 470
2
votes
3
replies
3.4k
views
Samtools bam2fq converting bam file to fastq. What happens to unmapped reads?
Assembly alignment sequencing next-gen
updated 2.1 years ago by 14k • written 2.1 years ago by ▴ 470
0
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0
replies
823
views
Comment: C: Error occur during tophat2 downloading
2.2 years ago by williamsbrian5064 ▴ 470
0
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1
reply
2.1k
views
Comment: C: Error: htsjdk.tribble.TribbleExpection: The provided VCF file is malformed at ap
2.2 years ago by williamsbrian5064 ▴ 470
0
votes
1
reply
928
views
Computing all possible single amino acid substitutions for a protein
genome gene
updated 2.3 years ago by • 0 • written 3.8 years ago by ▴ 470
0
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1
reply
1.1k
views
Comment: C: How to remove contamination from WGS fastq files
2.5 years ago by williamsbrian5064 ▴ 470
0
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1
reply
1.1k
views
Comment: C: How to remove contamination from WGS fastq files
2.5 years ago by williamsbrian5064 ▴ 470
0
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1
reply
1.1k
views
Comment: C: How to remove contamination from WGS fastq files
2.5 years ago by williamsbrian5064 ▴ 470
8
votes
10
replies
1.1k
views
How to remove contamination from WGS fastq files
next-gen sequence
updated 2.5 years ago by 127k • written 2.5 years ago by ▴ 470
0
votes
1
reply
1.1k
views
Comment: C: How to remove contamination from WGS fastq files
2.5 years ago by williamsbrian5064 ▴ 470
1
vote
0
replies
3.3k
views
Comment: C: No alias or index file found for protein database
3.5 years ago by williamsbrian5064 ▴ 470
0
votes
0
replies
3.3k
views
Comment: C: No alias or index file found for protein database
3.5 years ago by williamsbrian5064 ▴ 470
0
votes
1
reply
13k
views
Comment: C: Best tool for variant calling
3.5 years ago by williamsbrian5064 ▴ 470
0
votes
2
replies
539
views
samtools having to use -A input option
assembly next-gen genome alignment
3.7 years ago by williamsbrian5064 ▴ 470
17
votes
37
replies
3.3k
views
No alias or index file found for protein database
next-gen software error sequence
updated 3.8 years ago by 20 • written 4.0 years ago by ▴ 470
195 results • Page 1 of 4
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