Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
0
votes
3
replies
359
views
How to identify gaps in a genome?
awk
seqkit
assembly
fasta
genome
updated 1 day ago by
colindaven
6.4k • written 9 days ago by
rj.rezwan
• 0
0
votes
0
replies
359
views
Comment:
Comment: How to identify gaps in a genome?
9 days ago by
rj.rezwan
• 0
3
votes
1
reply
264
views
how to change the gene header names in a fasta file?
fasta
bioawk
awk
seqkit
updated 13 days ago by
Ram
43k • written 13 days ago by
rj.rezwan
• 0
0
votes
0
replies
275
views
Comment:
Comment: kmer analysis for genome size estimation
20 days ago by
rj.rezwan
• 0
0
votes
0
replies
275
views
Comment:
Comment: kmer analysis for genome size estimation
20 days ago by
rj.rezwan
• 0
0
votes
4
replies
275
views
kmer analysis for genome size estimation
kmer
merqury
allotetraploid
pacbio
hifiasm
20 days ago by
rj.rezwan
• 0
0
votes
0
replies
416
views
Comment:
Comment: why the file is low after combining the Hi-C reads using Arima genomics pipeline
6 weeks ago by
rj.rezwan
• 0
0
votes
1
reply
416
views
Comment:
Comment: why the file is low after combining the Hi-C reads using Arima genomics pipeline
6 weeks ago by
rj.rezwan
• 0
0
votes
1
reply
416
views
Comment:
Comment: why the file is low after combining the Hi-C reads using Arima genomics pipeline
6 weeks ago by
rj.rezwan
• 0
0
votes
6
replies
416
views
why the file is low after combining the Hi-C reads using Arima genomics pipeline of mapping
bwa
mapping
genome
samtools
plants
6 weeks ago by
rj.rezwan
• 0
0
votes
0
replies
126
views
issue with the Arima genomics pipeline for Hi-C scaffolding
plant
pacbio
assembly
genome
Hi-C
7 weeks ago by
rj.rezwan
• 0
1
vote
1
reply
224
views
Is there any database for transposable elements in cactus plants
EDTA
transposable-elements
updated 8 weeks ago by
Ram
43k • written 8 weeks ago by
rj.rezwan
• 0
0
votes
0
replies
492
views
Comment:
Comment: allele matching between identical genotypes
10 weeks ago by
rj.rezwan
• 0
0
votes
4
replies
492
views
allele matching between identical genotypes
haplotyping
plink
vcf
GATK
varaint
10 weeks ago by
rj.rezwan
• 0
0
votes
0
replies
492
views
Comment:
Comment: allele matching between identical genotypes
12 weeks ago by
rj.rezwan
• 0
0
votes
1
reply
358
views
how to run the compare_genomes for comparative analysis
genome
orthofinder
evolution
updated 4 months ago by
dthorbur
★ 1.9k • written 4 months ago by
rj.rezwan
• 0
0
votes
2
replies
858
views
Comment:
Comment: How to download multiple genome files using command line (MacOS) using datasets
4 months ago by
rj.rezwan
• 0
0
votes
0
replies
975
views
Comment:
Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by
rj.rezwan
• 0
0
votes
1
reply
975
views
Comment:
Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by
rj.rezwan
• 0
0
votes
1
reply
975
views
Comment:
Comment: file conversion from gtf to gff3 for evidence modeler
updated 6 months ago by
Ram
43k • written 6 months ago by
rj.rezwan
• 0
0
votes
1
reply
975
views
Comment:
Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by
rj.rezwan
• 0
0
votes
1
reply
975
views
Comment:
Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by
rj.rezwan
• 0
1
vote
10
replies
975
views
file conversion from gtf to gff3 for evidence modeler
gff3
stringtie
gtf
6 months ago by
rj.rezwan
• 0
0
votes
1
reply
703
views
Comment:
Comment: samtools produces truncated error during merging the bam files
6 months ago by
rj.rezwan
• 0
2
votes
3
replies
703
views
samtools produces truncated error during merging the bam files
bam
samtools
HISAT
updated 6 months ago by
Ram
43k • written 6 months ago by
rj.rezwan
• 0
2
votes
5
replies
948
views
6 follow
Forum:
Biostar as a next generation version
meta
mobile-app
updated 6 months ago by
Ram
43k • written 7 months ago by
rj.rezwan
• 0
0
votes
1
reply
828
views
Comment:
Comment: investigate the inversions in comparison of assembled genome with reference geno
8 months ago by
rj.rezwan
• 0
0
votes
3
replies
828
views
investigate the inversions in comparison of assembled genome with reference genome
genome
assembly
scaffold
ragtag
dotplot
updated 8 months ago by
samuel.a.odonnell
▴ 520 • written 8 months ago by
rj.rezwan
• 0
0
votes
1
reply
893
views
Comment:
Comment: How to find the coverage of the assembled contigs of the PacBio long reads?
8 months ago by
rj.rezwan
• 0
2
votes
3
replies
893
views
How to find the coverage of the assembled contigs of the PacBio long reads?
PacBio
assembly
coverage
updated 8 months ago by
liorglic
★ 1.4k • written 8 months ago by
rj.rezwan
• 0
0
votes
0
replies
682
views
Comment:
Comment: How to make the SNP density plot using hapmap file
9 months ago by
rj.rezwan
• 0
1
vote
2
replies
682
views
How to make the SNP density plot using hapmap file
vcf
haplotype
hapmap
CMplot
9 months ago by
rj.rezwan
• 0
0
votes
0
replies
333
views
How to perform a phylogenetic analysis from a vcf file
variants
haplotyping
phylogeny
vcf
10 months ago by
rj.rezwan
• 0
4
votes
2
replies
889
views
How to calculate kinship matrix table from vcf file
variants
haplotyping
kinship
heatmap
updated 10 months ago by
chrchang523
10k • written 10 months ago by
rj.rezwan
• 0
0
votes
0
replies
293
views
how to retrieve the chunk of every chromosome from a vcf file
haplotyping
varaints
11 months ago by
rj.rezwan
• 0
0
votes
0
replies
648
views
Comment:
Comment: how to make a header name in a haplotyping script of gatk?
12 months ago by
rj.rezwan
• 0
0
votes
0
replies
648
views
Comment:
Comment: how to make a header name in a haplotyping script of gatk?
12 months ago by
rj.rezwan
• 0
2
votes
6
replies
648
views
how to make a header name in a haplotyping script of gatk?
headername
gatk
haplotypecalling
12 months ago by
rj.rezwan
• 0
0
votes
1
reply
648
views
Comment:
Comment: how to make a header name in a haplotyping script of gatk?
12 months ago by
rj.rezwan
• 0
0
votes
1
reply
991
views
Comment:
Comment: why CombineGCVFs in gatk not showing all the samples name?
updated 12 months ago by
Ram
43k • written 12 months ago by
rj.rezwan
• 0
0
votes
1
reply
991
views
Comment:
Comment: why CombineGCVFs in gatk not showing all the samples name?
12 months ago by
rj.rezwan
• 0
0
votes
1
reply
991
views
Comment:
Comment: why CombineGCVFs in gatk not showing all the samples name?
12 months ago by
rj.rezwan
• 0
2
votes
7
replies
991
views
why CombineGCVFs in gatk not showing all the samples name?
haplotypecalling
CombineGVCFs
GATK
updated 12 months ago by
Ram
43k • written 12 months ago by
rj.rezwan
• 0
0
votes
1
reply
979
views
Comment:
Comment: error with CombineGVCFs to join large number of files
12 months ago by
rj.rezwan
• 0
6
votes
5
replies
979
views
error with CombineGVCFs to join large number of files
haplotypecalling
CombineGVCFs
GATK
12 months ago by
rj.rezwan
• 0
1
vote
1
reply
412
views
Why GATK is slow with haplotypecalling
GATK
HaplotypeCalling
updated 13 months ago by
Pierre Lindenbaum
161k • written 13 months ago by
rj.rezwan
• 0
0
votes
0
replies
1.3k
views
Comment:
Comment: GATK error of Argument --emit-ref-confidence
14 months ago by
rj.rezwan
• 0
0
votes
1
reply
1.3k
views
Comment:
Comment: GATK error of Argument --emit-ref-confidence
14 months ago by
rj.rezwan
• 0
0
votes
4
replies
1.3k
views
GATK error of Argument --emit-ref-confidence
argument
GATK
HaplotypeCaller
14 months ago by
rj.rezwan
• 0
0
votes
1
reply
1.5k
views
Comment:
Comment: GATK showing error of reference file index
updated 14 months ago by
Ram
43k • written 14 months ago by
rj.rezwan
• 0
83 results • Page
1 of 2
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6