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2
votes
7
replies
5.4k
views
9 follow
problem with HOMER findMotifsGenome.pl
HOMER ATAC-Seq
updated 3 months ago by • 0 • written 5.8 years ago by ▴ 80
0
votes
0
replies
800
views
check co-occurrence of SNV/INDEL in a vcf file
snp genome Assembly sequencing
updated 13 months ago by 44k • written 4.4 years ago by ▴ 80
2
votes
4
replies
2.0k
views
Extract samples from a bcf files based on genotype?
sequencing next-gen genome snp
updated 4.7 years ago by 10k • written 4.7 years ago by ▴ 80
0
votes
1
reply
2.0k
views
Comment: C: Extract samples from a bcf files based on genotype?
4.7 years ago by ste.lu ▴ 80
0
votes
0
replies
6.1k
views
Comment: C: Identifying the orientation of a CTCF motif?
4.8 years ago by ste.lu ▴ 80
0
votes
0
replies
882
views
Use arrows to indicate CTCF motifs orientation
sequencing ChIP-Seq
4.8 years ago by ste.lu ▴ 80
0
votes
1
reply
6.1k
views
Comment: C: Identifying the orientation of a CTCF motif?
4.8 years ago by ste.lu ▴ 80
0
votes
0
replies
546
views
Replication timing definition in Chip-Seq
genome next-gen
5.0 years ago by ste.lu ▴ 80
0
votes
1
reply
2.2k
views
Comment: C: Extract Interaction Matrix from UpSetR
5.0 years ago by ste.lu ▴ 80
1
vote
3
replies
2.2k
views
Extract Interaction Matrix from UpSetR
UpSetR R matrix
updated 13 months ago by 44k • written 5.0 years ago by ▴ 80
0
votes
2
replies
856
views
Looking for the best plot for overlapping features
plot suggestion
updated 5.0 years ago by 44k • written 5.0 years ago by ▴ 80
0
votes
1
reply
651
views
Bedtools shift in a defined chromosomal position
bedtools
updated 5.1 years ago by 163k • written 5.1 years ago by ▴ 80
0
votes
0
replies
737
views
Segment the genome in an unbiased way
genome sequencing Hi-C
5.2 years ago by ste.lu ▴ 80
0
votes
0
replies
3.3k
views
Comment: C: Visualize BEDPE file
5.5 years ago by ste.lu ▴ 80
1
vote
2
replies
3.3k
views
Visualize BEDPE file
IGV BED HiC
5.5 years ago by ste.lu ▴ 80
2
votes
1
reply
925
views
Comment: C: Group and merge entries in a table according to a second one
5.6 years ago by ste.lu ▴ 80
5
votes
4
replies
925
views
Group and merge entries in a table according to a second one
R next-gen assembly
5.6 years ago by ste.lu ▴ 80
0
votes
1
reply
1.4k
views
Comment: C: from GWAS to variants
5.7 years ago by ste.lu ▴ 80
0
votes
4
replies
1.4k
views
from GWAS to variants
GWAS SNP
5.7 years ago by ste.lu ▴ 80
0
votes
0
replies
2.4k
views
Comment: C: Split a sequence in a fastq file
5.7 years ago by ste.lu ▴ 80
0
votes
1
reply
2.4k
views
Comment: C: Split a sequence in a fastq file
5.7 years ago by ste.lu ▴ 80
0
votes
1
reply
2.4k
views
Comment: C: Split a sequence in a fastq file
5.7 years ago by ste.lu ▴ 80
5
votes
9
replies
2.4k
views
Split a sequence in a fastq file
fastq sequencing sequence next-gen
updated 5.7 years ago by 163k • written 5.7 years ago by ▴ 80
0
votes
1
reply
2.0k
views
Comment: C: RNA-Seq analysis = only 10 DE genes
5.7 years ago by ste.lu ▴ 80
0
votes
1
reply
2.0k
views
Comment: C: RNA-Seq analysis = only 10 DE genes
5.7 years ago by ste.lu ▴ 80
0
votes
0
replies
2.0k
views
Comment: C: RNA-Seq analysis = only 10 DE genes
5.7 years ago by ste.lu ▴ 80
0
votes
0
replies
2.0k
views
Comment: C: RNA-Seq analysis = only 10 DE genes
5.7 years ago by ste.lu ▴ 80
5
votes
10
replies
2.0k
views
RNA-Seq analysis = only 10 DE genes
RNA-Seq
updated 5.7 years ago by 101k • written 5.7 years ago by ▴ 80
0
votes
0
replies
903
views
Comment: C: Tool to predict perturbation in biological system
5.8 years ago by ste.lu ▴ 80
1
vote
3
replies
903
views
Tool to predict perturbation in biological system
mathematical model cell designer system biology
5.8 years ago by ste.lu ▴ 80
1
vote
0
replies
3.5k
views
Comment: C: Why quantitative design are preferred GWAS approach
5.8 years ago by ste.lu ▴ 80
9
votes
5
replies
3.5k
views
Why quantitative design are preferred GWAS approach
GWAS Statistical analysis QTL
updated 5.8 years ago by 88k • written 5.9 years ago by ▴ 80
0
votes
1
reply
3.5k
views
Comment: C: Why quantitative design are preferred GWAS approach
5.9 years ago by ste.lu ▴ 80
2
votes
3
replies
1.1k
views
When is better to pool samples?
Assembly software error math
updated 6.0 years ago by 20 • written 6.2 years ago by ▴ 80
0
votes
0
replies
964
views
Comment: C: Link genes to organ of expression
6.1 years ago by ste.lu ▴ 80
0
votes
1
reply
964
views
Comment: C: Link genes to organ of expression
6.1 years ago by ste.lu ▴ 80
0
votes
3
replies
964
views
Link genes to organ of expression
gene RNA-Seq
6.1 years ago by ste.lu ▴ 80
0
votes
1
reply
1.1k
views
Comment: C: When is better to pool samples?
6.2 years ago by ste.lu ▴ 80
0
votes
1
reply
13k
views
Comment: C: Seqtk subseq: structure of file name.lst
6.2 years ago by ste.lu ▴ 80
0
votes
1
reply
13k
views
Comment: C: Seqtk subseq: structure of file name.lst
6.2 years ago by ste.lu ▴ 80
0
votes
1
reply
13k
views
Comment: C: Seqtk subseq: structure of file name.lst
6.2 years ago by ste.lu ▴ 80
0
votes
0
replies
13k
views
Comment: C: Seqtk subseq: structure of file name.lst
6.2 years ago by ste.lu ▴ 80
4
votes
9
replies
13k
views
Seqtk subseq: structure of file name.lst
sequence next-gen
updated 6.2 years ago by 44k • written 6.2 years ago by ▴ 80
0
votes
0
replies
1.4k
views
4C-seq analysis using w4Cseq ERROR: Requested column 1, but database file all_reads.bed only has fields 1 - 0.
4C-seq w4cseq alignment
6.4 years ago by ste.lu ▴ 80
0
votes
0
replies
7.7k
views
Comment: C: Install Bowtie2 on Windows 10 Home edition
6.6 years ago by ste.lu ▴ 80
0
votes
0
replies
7.7k
views
Comment: C: Install Bowtie2 on Windows 10 Home edition
6.6 years ago by ste.lu ▴ 80
2
votes
6
replies
7.7k
views
Install Bowtie2 on Windows 10 Home edition
genome next-gen sequencing software error
updated 6.6 years ago by 144k • written 6.6 years ago by ▴ 80
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