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questions
2
votes
7
replies
5.9k
views
9 follow
problem with HOMER findMotifsGenome.pl
HOMER
ATAC-Seq
updated 8 months ago by
kaaz
• 0 • written 6.2 years ago by
ste.lu
▴ 80
0
votes
0
replies
856
views
check co-occurrence of SNV/INDEL in a vcf file
snp
genome
Assembly
sequencing
updated 18 months ago by
Ram
44k • written 4.7 years ago by
ste.lu
▴ 80
2
votes
4
replies
2.1k
views
Extract samples from a bcf files based on genotype?
sequencing
next-gen
genome
snp
updated 5.0 years ago by
chrchang523
11k • written 5.0 years ago by
ste.lu
▴ 80
0
votes
0
replies
931
views
Use arrows to indicate CTCF motifs orientation
sequencing
ChIP-Seq
5.2 years ago by
ste.lu
▴ 80
0
votes
0
replies
577
views
Replication timing definition in Chip-Seq
genome
next-gen
5.4 years ago by
ste.lu
▴ 80
1
vote
3
replies
2.3k
views
Extract Interaction Matrix from UpSetR
UpSetR
R
matrix
updated 17 months ago by
Ram
44k • written 5.4 years ago by
ste.lu
▴ 80
0
votes
2
replies
928
views
Looking for the best plot for overlapping features
plot
suggestion
updated 5.4 years ago by
Ram
44k • written 5.4 years ago by
ste.lu
▴ 80
0
votes
1
reply
687
views
Bedtools shift in a defined chromosomal position
bedtools
updated 5.5 years ago by
Pierre Lindenbaum
164k • written 5.5 years ago by
ste.lu
▴ 80
0
votes
0
replies
780
views
Segment the genome in an unbiased way
genome
sequencing
Hi-C
5.6 years ago by
ste.lu
▴ 80
1
vote
2
replies
3.5k
views
Visualize BEDPE file
IGV
BED
HiC
5.9 years ago by
ste.lu
▴ 80
5
votes
4
replies
999
views
Group and merge entries in a table according to a second one
R
next-gen
assembly
6.0 years ago by
ste.lu
▴ 80
0
votes
4
replies
1.5k
views
from GWAS to variants
GWAS
SNP
6.0 years ago by
ste.lu
▴ 80
5
votes
9
replies
2.6k
views
Split a sequence in a fastq file
fastq
sequencing
sequence
next-gen
updated 6.1 years ago by
Pierre Lindenbaum
164k • written 6.1 years ago by
ste.lu
▴ 80
5
votes
10
replies
2.1k
views
RNA-Seq analysis = only 10 DE genes
RNA-Seq
updated 6.1 years ago by
Istvan Albert
102k • written 6.1 years ago by
ste.lu
▴ 80
1
vote
3
replies
971
views
Tool to predict perturbation in biological system
mathematical model
cell designer
system biology
6.2 years ago by
ste.lu
▴ 80
9
votes
5
replies
3.8k
views
Why quantitative design are preferred GWAS approach
GWAS
Statistical analysis
QTL
updated 6.2 years ago by
Kevin Blighe
88k • written 6.2 years ago by
ste.lu
▴ 80
2
votes
3
replies
1.2k
views
When is better to pool samples?
Assembly
software error
math
updated 6.4 years ago by
Biostar
20 • written 6.5 years ago by
ste.lu
▴ 80
0
votes
3
replies
1.1k
views
Link genes to organ of expression
gene
RNA-Seq
6.5 years ago by
ste.lu
▴ 80
4
votes
9
replies
14k
views
Seqtk subseq: structure of file name.lst
sequence
next-gen
updated 6.6 years ago by
Ram
44k • written 6.6 years ago by
ste.lu
▴ 80
0
votes
0
replies
1.5k
views
4C-seq analysis using w4Cseq ERROR: Requested column 1, but database file all_reads.bed only has fields 1 - 0.
4C-seq
w4cseq
alignment
6.7 years ago by
ste.lu
▴ 80
2
votes
6
replies
7.9k
views
Install Bowtie2 on Windows 10 Home edition
genome
next-gen
sequencing
software error
updated 7.0 years ago by
GenoMax
148k • written 7.0 years ago by
ste.lu
▴ 80
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