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2
votes
4
replies
2.3k
views
Issue with bcftools csq phasing
phasing genotyping
updated 2.9 years ago by ▴ 10 • written 5.5 years ago by ▴ 140
0
votes
2
replies
4.2k
views
[ti_index_core] the chromosome blocks not continuous at line xxxx, is the file sorted? [pos 1]
vcf index variant
updated 3.2 years ago by 20 • written 6.2 years ago by ▴ 140
0
votes
0
replies
906
views
Plasmid obtained from assembly is incomplete.
plasmid assembly Recycler
5.4 years ago by shubhra.bhattacharya ▴ 140
4
votes
7
replies
1.5k
views
filter genome above N50 value
assembly
updated 5.4 years ago by 54k • written 5.4 years ago by ▴ 140
2
votes
5
replies
1.9k
views
GO network analysis
gene ontology
updated 5.4 years ago by ▴ 160 • written 5.4 years ago by ▴ 140
0
votes
2
replies
3.5k
views
dN/dS ratio from .vcf file
synonmous non-synomous mutation
updated 6 months ago by ▴ 850 • written 5.4 years ago by ▴ 140
5
votes
9
replies
1.4k
views
Finding out which genes are covered the most
coverage genes
updated 5.4 years ago by 161k • written 5.4 years ago by ▴ 140
0
votes
2
replies
1.1k
views
Bowtie2 and bwa *big* disparity in alignment percentages
alignment
updated 5.5 years ago by 100k • written 5.5 years ago by ▴ 140
4
votes
5
replies
1.3k
views
picard tools CalculateHsMetrics error
picard tools Metrics
updated 5.5 years ago by • 0 • written 5.5 years ago by ▴ 140
0
votes
2
replies
1.0k
views
Fetched gene from gff file shows similarity to other organism
gff reference
5.6 years ago by shubhra.bhattacharya ▴ 140
1
vote
6
replies
4.0k
views
Probable bug in bcftools while parsing headers
bug bcftools
updated 2.7 years ago by 3.0k • written 5.6 years ago by ▴ 140
1
vote
1
reply
1.1k
views
Varscan read count output conversion
varscan
5.6 years ago by shubhra.bhattacharya ▴ 140
1
vote
2
replies
2.1k
views
GT (genotype information) in haploid organism has a value of 2 .
snp genotype
updated 5.9 years ago by 20 • written 6.1 years ago by ▴ 140
0
votes
1
reply
836
views
Data set to perform DGE
trancriptomics DGE
updated 6.1 years ago by ▴ 790 • written 6.1 years ago by ▴ 140
0
votes
0
replies
1.1k
views
Difference in TASSEL4 and TASSEL5
GBS Tassel
6.2 years ago by shubhra.bhattacharya ▴ 140
0
votes
1
reply
2.4k
views
Genotyping by Sequencing: TASSEL and UNEAK
gbs
updated 6.2 years ago by 20 • written 6.3 years ago by ▴ 140
0
votes
3
replies
1.6k
views
FreeBayes Variant Diversity capture
SNP
6.3 years ago by shubhra.bhattacharya ▴ 140
1
vote
1
reply
1.6k
views
Distinction between padded bed and regions bed
alignment
updated 6.3 years ago by 35k • written 6.3 years ago by ▴ 140
3
votes
4
replies
4.3k
views
Filter all the common SNP's in different vcf files(corresponding to different samples)
SNP
updated 6.3 years ago by 21k • written 6.3 years ago by ▴ 140
2
votes
3
replies
1.8k
views
Filter SNP's for no more than 3 mismatches per 10 bp window
SNP filter mismatch gatk
updated 6.3 years ago by 161k • written 6.3 years ago by ▴ 140
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