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25
votes
6
replies
24k
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7 follow
What are Supplementary Reads?
alignment reads
updated 2.5 years ago by ▴ 10 • written 7.4 years ago by ▴ 50
8
votes
5
replies
2.2k
views
Difference between 'intergenic' and 'ncRNA' in annotation.
annotation annovar intergenic ncrna
updated 6.1 years ago by 20 • written 7.3 years ago by ▴ 50
0
votes
2
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2.2k
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Comment: C: Difference between 'intergenic' and 'ncRNA' in annotation.
7.3 years ago by 2012secondseason ▴ 50
10
votes
3
replies
6.2k
views
When Hard clipping is used instead of the Soft clipping ?
hard clipping cigar clipping
updated 7.4 years ago by 105k • written 7.4 years ago by ▴ 50
6
votes
6
replies
2.0k
views
What is URL of Contig in VCF format?
contig
updated 7.4 years ago by 45k • written 7.4 years ago by ▴ 50
0
votes
1
reply
2.0k
views
Comment: C: What is URL of Contig in VCF format?
7.4 years ago by 2012secondseason ▴ 50
1
vote
1
reply
1.4k
views
How do we get VCF's ALT field values?
vcf alt bcftools
7.4 years ago by 2012secondseason ▴ 50
0
votes
0
replies
3.9k
views
Comment: C: What's 1000 Genome indel calls??
7.4 years ago by 2012secondseason ▴ 50
3
votes
3
replies
3.9k
views
What's 1000 Genome indel calls??
1000Genome realignertargetcreater gatk
updated 4.4 years ago by • 0 • written 7.4 years ago by ▴ 50
7
votes
6
replies
4.6k
views
What is Read Group platform??
read-group
updated 2.2 years ago by 45k • written 7.4 years ago by ▴ 50
0
votes
0
replies
3.4k
views
Comment: C: In CIGAR table, what does P operation mean?
7.4 years ago by 2012secondseason ▴ 50
2
votes
3
replies
3.4k
views
In CIGAR table, what does P operation mean?
CIGAR padding silent deletion
updated 7.4 years ago by 166k • written 7.4 years ago by ▴ 50
0
votes
0
replies
4.6k
views
Comment: C: What is Read Group platform??
7.4 years ago by 2012secondseason ▴ 50
0
votes
1
reply
6.1k
views
Comment: C: what's Validation stringency?
7.4 years ago by 2012secondseason ▴ 50
7
votes
3
replies
6.1k
views
what's Validation stringency?
picard
updated 2.3 years ago by 45k • written 7.4 years ago by ▴ 50
2
votes
4
replies
2.0k
views
What's the difference between 'clipping' and 'unmapped' and 'skipped'?
tablet cigar alignment
updated 7.4 years ago by ▴ 10 • written 7.4 years ago by ▴ 50
4
votes
1
reply
1.5k
views
How can overlap with paired end sequence??
cigar tablet paired end alignment
updated 7.4 years ago by ★ 3.0k • written 7.4 years ago by ▴ 50
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