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1
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3
replies
1.1k
views
small representative database
taxonomy data genomes proteomes
updated 5.2 years ago by ★ 29k • written 5.2 years ago by ▴ 160
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0
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2.4k
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Comment: C: blasting a fasta file with many, many contigs via command line
5.2 years ago by lagartija ▴ 160
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0
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722
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Comment: C: Arrange Table for orthogroup categorization
5.4 years ago by lagartija ▴ 160
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0
replies
2.0k
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Answer: A: How to extract all ONT reads that connect/overlaps two or more contigs ?
5.4 years ago by lagartija ▴ 160
0
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0
replies
900
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Comment: C: B2G missing GO terms
5.5 years ago by lagartija ▴ 160
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0
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17k
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Comment: C: fasta file to tab delimited file
5.6 years ago by lagartija ▴ 160
1
vote
5
replies
3.4k
views
running BUSCO on unknown genomes ?
assembly
updated 5.6 years ago by ▴ 90 • written 6.2 years ago by ▴ 160
0
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1
reply
6.2k
views
Comment: C: PBJelly error at mapping level
5.6 years ago by lagartija ▴ 160
1
vote
1
reply
3.8k
views
Understanding assembly graphs
assembly gfa
updated 5.6 years ago by 9.2k • written 5.6 years ago by ▴ 160
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0
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963
views
Answer: A: Fast all to all global alignment
5.6 years ago by lagartija ▴ 160
1
vote
1
reply
2.1k
views
alternative to mauve : multiple alignments of whole genomes
alignment genome
5.6 years ago by lagartija ▴ 160
0
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0
replies
778
views
test significance of species abundance in metagenomic data
metagenomics ecology
5.9 years ago by lagartija ▴ 160
3
votes
4
replies
4.2k
views
Hybrid assembly using MinION data + correction with Illumina. Which strategy to adopt ?
assembly
updated 6.0 years ago by ★ 2.1k • written 7.1 years ago by ▴ 160
0
votes
2
replies
2.2k
views
psiblast to get pssm. How to get a pssm from a multiple alignment ?
pssm
updated 6.1 years ago by 20 • written 6.1 years ago by ▴ 160
0
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0
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15k
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Comment: C: How To Create A Pssm From Fasta Homologues With Ncbi Blast+ 2.2.23
6.1 years ago by lagartija ▴ 160
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0
replies
1.0k
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Comment: C: Mapping of metagenomic reads on genomes - length criteria ?
6.1 years ago by lagartija ▴ 160
0
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2
replies
1.0k
views
Mapping of metagenomic reads on genomes - length criteria ?
mapping
6.1 years ago by lagartija ▴ 160
1
vote
0
replies
1.1k
views
Answer: A: Question about shotgun Metagenomic
6.1 years ago by lagartija ▴ 160
0
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0
replies
966
views
pssm for rpsblast
domains
6.2 years ago by lagartija ▴ 160
0
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0
replies
7.7k
views
Answer: A: Relative abundance fro metagenomics samples
6.2 years ago by lagartija ▴ 160
0
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1
reply
3.4k
views
Comment: C: running BUSCO on unknown genomes ?
6.2 years ago by lagartija ▴ 160
0
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1
reply
1.6k
views
masking low complexity regions in a protein database for BLAST
blast
6.3 years ago by lagartija ▴ 160
0
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0
replies
38k
views
Comment: C: How Do I Do Simple Go Term Lookup Given A Gene (Or Mrna) Identifier?
6.3 years ago by lagartija ▴ 160
1
vote
1
reply
5.4k
views
Comment: C: How to give merged reads as input in spades
6.3 years ago by lagartija ▴ 160
1
vote
1
reply
984
views
Functionnal annotation of metagenomes
metagenomics protein function
6.3 years ago by lagartija ▴ 160
1
vote
2
replies
1.1k
views
GenBank ID to GO term
annotation metagenomics
updated 6.3 years ago by 8.4k • written 6.3 years ago by ▴ 160
0
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0
replies
1.1k
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Comment: C: GenBank ID to GO term
6.3 years ago by lagartija ▴ 160
0
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0
replies
1.9k
views
Comment: C: Annotation of assembled metagenomic data
6.3 years ago by lagartija ▴ 160
5
votes
3
replies
1.9k
views
Annotation of assembled metagenomic data
metagenomics taxonomy
updated 6.3 years ago by 9.2k • written 6.3 years ago by ▴ 160
0
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0
replies
4.5k
views
Answer: A: Classify Or Align ?
6.4 years ago by lagartija ▴ 160
0
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0
replies
1.5k
views
Comment: C: use blast+ to blast fine domains in proteins
6.9 years ago by lagartija ▴ 160
0
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1
reply
1.5k
views
Comment: C: use blast+ to blast fine domains in proteins
6.9 years ago by lagartija ▴ 160
3
votes
6
replies
1.5k
views
use blast+ to blast fine domains in proteins
alignment
6.9 years ago by lagartija ▴ 160
0
votes
0
replies
6.1k
views
Comment: A: How to annotate nodes in Cytoscape
7.0 years ago by lagartija ▴ 160
2
votes
4
replies
6.1k
views
How to annotate nodes in Cytoscape
software error
7.0 years ago by lagartija ▴ 160
1
vote
0
replies
1.8k
views
Answer: A: act comparaison of 2 genomes - problem with the blast output
7.0 years ago by lagartija ▴ 160
0
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0
replies
3.4k
views
Comment: C: kmer content failling with fastqc
7.0 years ago by lagartija ▴ 160
0
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0
replies
6.1k
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Comment: A: How to annotate nodes in Cytoscape
7.0 years ago by lagartija ▴ 160
1
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0
replies
2.0k
views
Answer: A: How to concatenate scaffolds in a plant mitochondrial genome assembly
7.0 years ago by lagartija ▴ 160
0
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1
reply
7.0k
views
Comment: C: Error in BWA-MEM running in linux
7.0 years ago by lagartija ▴ 160
0
votes
0
replies
3.4k
views
Comment: Comment: Evaluating the quality of draft genomes: checkm vs reapr
updated 3.1 years ago by 45k • written 7.0 years ago by ▴ 160
0
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0
replies
1.3k
views
Comment: C: R fisher test two condition significantly different
7.0 years ago by lagartija ▴ 160
0
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0
replies
2.1k
views
Answer: A: ERROR: File supplied on command line; use -s, -pacbio-raw, -pacbio-corrected, -n
7.0 years ago by lagartija ▴ 160
0
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0
replies
2.4k
views
Comment: C: new using pore tools. extract fast
7.0 years ago by lagartija ▴ 160
0
votes
1
reply
2.4k
views
Comment: C: new using pore tools. extract fast
7.0 years ago by lagartija ▴ 160
0
votes
2
replies
2.4k
views
Comment: C: new using pore tools. extract fast
7.0 years ago by lagartija ▴ 160
0
votes
0
replies
2.4k
views
Comment: C: new using pore tools. extract fast
7.0 years ago by lagartija ▴ 160
0
votes
10
replies
2.4k
views
new using pore tools. extract fast
next-gen
7.0 years ago by lagartija ▴ 160
0
votes
0
replies
8.3k
views
Comment: C: Oxford Nanopore and Illumina hybrid assembly
7.0 years ago by lagartija ▴ 160
0
votes
3
replies
8.3k
views
Comment: C: Oxford Nanopore and Illumina hybrid assembly
7.0 years ago by lagartija ▴ 160
103 results • Page 2 of 3
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