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2
votes
2
replies
8.0k
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Custom Selection of GO Terms or Pathways in EnrichR Output
enrichR ggplot2 R Python RNA-Seq
7 weeks ago by mohammedtoufiq91 ▴ 270
0
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0
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8.0k
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Comment: Comment: Custom Selection of GO Terms or Pathways in EnrichR Output
7 weeks ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
13k
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Comment: Comment: JoinLayers to find markers in merged or integrated analysis in seurat
20 months ago by mohammedtoufiq91 ▴ 270
2
votes
2
replies
13k
views
JoinLayers to find markers in merged or integrated analysis in seurat
scRNA-seq seurat FindMarkers
20 months ago by mohammedtoufiq91 ▴ 270
0
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0
replies
3.9k
views
Comment: Comment: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
22 months ago by mohammedtoufiq91 ▴ 270
0
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1
reply
3.9k
views
Comment: Comment: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
22 months ago by mohammedtoufiq91 ▴ 270
2
votes
4
replies
3.9k
views
How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objects in R?
scrna-seq seurat signac
22 months ago by mohammedtoufiq91 ▴ 270
0
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0
replies
6.0k
views
Comment: Comment: Illumina HumanHT-12 V3.0 expression beadchip reading data
2.5 years ago by mohammedtoufiq91 ▴ 270
1
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0
replies
2.7k
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Comment: Comment: How to retrieve Microarray probe annotations
2.6 years ago by mohammedtoufiq91 ▴ 270
4
votes
2
replies
2.7k
views
How to retrieve Microarray probe annotations
org.Hs.eg.db annotables AnnotationDbi Microarray R
2.6 years ago by mohammedtoufiq91 ▴ 270
3
votes
4
replies
3.8k
views
Issues marking genes in ComplexHeatmap
pheatmap complexheatmap heatmap ggplot2 R
updated 16 months ago by • 0 • written 2.7 years ago by ▴ 270
3
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1
reply
3.8k
views
Answer: Answer: Issues marking genes in ComplexHeatmap
2.7 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
3.8k
views
Comment: Comment: Issues marking genes in ComplexHeatmap
2.7 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
2.9k
views
Comment: Comment: Question about RNA-Seq data alignment
2.7 years ago by mohammedtoufiq91 ▴ 270
1
vote
0
replies
2.9k
views
Comment: Comment: Question about RNA-Seq data alignment
2.7 years ago by mohammedtoufiq91 ▴ 270
8
votes
9
replies
2.9k
views
Question about RNA-Seq data alignment
STAR Alignment BBMAP RNA-Seq Bowtie
2.7 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
2.9k
views
Comment: Comment: Question about RNA-Seq data alignment
2.7 years ago by mohammedtoufiq91 ▴ 270
0
votes
1
reply
2.9k
views
Comment: Comment: Question about RNA-Seq data alignment
2.7 years ago by mohammedtoufiq91 ▴ 270
1
vote
1
reply
1.6k
views
Comment: Comment: How to map and annotate gene symbols to gene type?
2.7 years ago by mohammedtoufiq91 ▴ 270
5
votes
3
replies
1.6k
views
How to map and annotate gene symbols to gene type?
Ensembl RefSeq UCSC biomart RNA-Seq
updated 2.7 years ago by 154k • written 2.7 years ago by ▴ 270
0
votes
0
replies
2.1k
views
Comment: Comment: Unable to run RSEM because of error rsem-parse-alignments : No such file or dire
2.8 years ago by mohammedtoufiq91 ▴ 270
0
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1
reply
2.1k
views
Comment: Comment: Unable to run RSEM because of error rsem-parse-alignments : No such file or dire
2.8 years ago by mohammedtoufiq91 ▴ 270
2
votes
4
replies
2.1k
views
Unable to run RSEM because of error rsem-parse-alignments : No such file or directory
RNA-Seq Bowtie2 RSEM Boost
2.8 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
816
views
How to identify mitochondrial contamination in RNAseq and QC data?
QC FastQC MultiQC alignment rna-seq
2.9 years ago by mohammedtoufiq91 ▴ 270
0
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0
replies
2.7k
views
Comment: Comment: Possibility of marking genes of interest by in ComplexHeatmap
2.9 years ago by mohammedtoufiq91 ▴ 270
0
votes
1
reply
2.7k
views
Comment: Comment: Possibility of marking genes of interest by in ComplexHeatmap
2.9 years ago by mohammedtoufiq91 ▴ 270
5
votes
4
replies
2.7k
views
Possibility of marking genes of interest by in ComplexHeatmap
heatmap ggplot2 R complexheatmap
2.9 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
2.2k
views
Comment: Comment: Plot heatmap by average based on sample groups
2.9 years ago by mohammedtoufiq91 ▴ 270
2
votes
2
replies
2.2k
views
Plot heatmap by average based on sample groups
pheatmap complexheatmap heatmap ggplot2 R
2.9 years ago by mohammedtoufiq91 ▴ 270
1
vote
0
replies
648
views
How to find miRNAs targeting genes using a list in R?
PicTar miRBase miRNA PITA R
2.9 years ago by mohammedtoufiq91 ▴ 270
1
vote
1
reply
1.2k
views
Representation of variables in PCA
ggplot2 biplot R pcatools pca
updated 3.1 years ago by ▴ 540 • written 3.1 years ago by ▴ 270
0
votes
0
replies
5.7k
views
Comment: Comment: How to adjust font size of row_split labels in ComplexHeatmap R package
3.4 years ago by mohammedtoufiq91 ▴ 270
6
votes
2
replies
5.7k
views
How to adjust font size of row_split labels in ComplexHeatmap R package
Heatmap ComplexHeatmap R labels
updated 3.4 years ago by 21k • written 3.4 years ago by ▴ 270
1
vote
3
replies
2.4k
views
Help with plotting heatmap with both row and column label annotations
pheatmap ComplexHeatmap R Heatmap annotations
updated 3.4 years ago by ★ 1.9k • written 3.4 years ago by ▴ 270
0
votes
0
replies
2.4k
views
Comment: Comment: Help with plotting heatmap with both row and column label annotations
3.4 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
2.2k
views
Comment: Comment: Extraction of high variance or contributing genes using pcatools
3.4 years ago by mohammedtoufiq91 ▴ 270
0
votes
1
reply
2.2k
views
Comment: Comment: Extraction of high variance or contributing genes using pcatools
3.4 years ago by mohammedtoufiq91 ▴ 270
5
votes
5
replies
2.2k
views
Extraction of high variance or contributing genes using pcatools
PCAtools FactoMineR R prcomp PCA
3.4 years ago by mohammedtoufiq91 ▴ 270
0
votes
1
reply
1.3k
views
Comment: Comment: How to label genes passing the p-value and fold change cut-offs in EnhancedVolca
3.5 years ago by mohammedtoufiq91 ▴ 270
4
votes
3
replies
1.3k
views
How to label genes passing the p-value and fold change cut-offs in EnhancedVolcano?
EnhancedVolcano volcano label R genes
updated 3.5 years ago by 154k • written 3.5 years ago by ▴ 270
0
votes
0
replies
1.8k
views
Comment: Comment: Unable to open pdf file of volcano plots created using many group comparisons fr
3.5 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
1.8k
views
Comment: Comment: Unable to open pdf file of volcano plots created using many group comparisons fr
3.5 years ago by mohammedtoufiq91 ▴ 270
5
votes
4
replies
1.8k
views
Unable to open pdf file of volcano plots created using many group comparisons from EnhancedVolcano package in R
tidyverse forloops EnhancedVolcano volcano R
3.5 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
2.6k
views
Comment: Comment: Error in ComplexHeatmap while adding barplot as column annotations
3.5 years ago by mohammedtoufiq91 ▴ 270
2
votes
2
replies
2.6k
views
Error in ComplexHeatmap while adding barplot as column annotations
ComplexHeatmap heatmap barplot R annotation
3.5 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
6.2k
views
Comment: Comment: How to add color scheme for many groups in PCA using R?
3.8 years ago by mohammedtoufiq91 ▴ 270
0
votes
1
reply
6.2k
views
Comment: Comment: How to add color scheme for many groups in PCA using R?
3.8 years ago by mohammedtoufiq91 ▴ 270
6
votes
4
replies
6.2k
views
How to add color scheme for many groups in PCA using R?
R biplot PCA PCAtools ggplot2
3.8 years ago by mohammedtoufiq91 ▴ 270
0
votes
0
replies
2.4k
views
Comment: Comment: Batch effect correction: Input data format for removeBatchEffect from limma pack
3.8 years ago by mohammedtoufiq91 ▴ 270
0
votes
1
reply
2.4k
views
Comment: Comment: Batch effect correction: Input data format for removeBatchEffect from limma pack
3.8 years ago by mohammedtoufiq91 ▴ 270
193 results • Page 1 of 4
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