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How to interpret different reduced models in time series analysis with DESeq2?
time-series DESeq2
10 weeks ago by arshad1292 ▴ 80
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492
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Comment: Comment: Interpreting time-series analysis with DESeq2 output
10 weeks ago by arshad1292 ▴ 80
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1
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492
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Comment: Comment: Interpreting time-series analysis with DESeq2 output
11 weeks ago by arshad1292 ▴ 80
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0
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492
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Comment: Comment: Interpreting time-series analysis with DESeq2 output
11 weeks ago by arshad1292 ▴ 80
0
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2
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292
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labelling selected genes in volcano plot
RNAseq R plot volcano
updated 11 weeks ago by 68k • written 11 weeks ago by ▴ 80
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2
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492
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Comment: Comment: Interpreting time-series analysis with DESeq2 output
11 weeks ago by arshad1292 ▴ 80
1
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8
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492
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Interpreting time-series analysis with DESeq2 output
time-series DESeq2
10 weeks ago by arshad1292 ▴ 80
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0
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311
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Comment: Comment: How to convert trinotate results into GFF3
11 weeks ago by arshad1292 ▴ 80
1
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2
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311
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How to convert trinotate results into GFF3
gff3 gtf trinotate
11 weeks ago by arshad1292 ▴ 80
1
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1
reply
296
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time-series analysis with DESeq2
time-series multifactorial R DESeq2
updated 12 weeks ago by ▴ 40 • written 12 weeks ago by ▴ 80
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2
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403
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creating a list of genes in python
rnaseq python
updated 12 weeks ago by ▴ 100 • written 12 weeks ago by ▴ 80
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0
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175
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how to set zorder for volcano plot
matplotlib python zorder volcano
3 months ago by arshad1292 ▴ 80
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0
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237
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Comment: Comment: rename so that dot (.) is replaced with underscore (_)
3 months ago by arshad1292 ▴ 80
1
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2
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237
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rename so that dot (.) is replaced with underscore (_)
rename linux mv
3 months ago by arshad1292 ▴ 80
0
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0
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241
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Comment: Comment: creating a txt file with absolute path to each directory
4 months ago by arshad1292 ▴ 80
1
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2
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241
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creating a txt file with absolute path to each directory
shell linux script
4 months ago by arshad1292 ▴ 80
0
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0
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286
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Comment: Comment: renaming files and including folder/directory name in it
4 months ago by arshad1292 ▴ 80
0
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2
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286
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renaming files and including folder/directory name in it
rename loop mv
4 months ago by arshad1292 ▴ 80
0
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0
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440
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Comment: Comment: problem with GTF file
4 months ago by arshad1292 ▴ 80
0
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2
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440
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problem with GTF file
gtf repeatmasker gff AGAT gffread
4 months ago by arshad1292 ▴ 80
0
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1
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491
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Comment: Comment: Confused about bin completion and contamination
7 months ago by arshad1292 ▴ 80
3
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3
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491
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Confused about bin completion and contamination
metagenomics bins metagenome
updated 7 months ago by ★ 22k • written 7 months ago by ▴ 80
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0
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423
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Comment: Comment: Why we allow contamination during binning?
9 months ago by arshad1292 ▴ 80
3
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2
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423
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Why we allow contamination during binning?
completion MAGs contamination metagenomic metagenome
9 months ago by arshad1292 ▴ 80
2
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7
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729
views
6 follow
Finding closest genome from genbank
bacterial genome blast genbank
updated 11 months ago by 7.5k • written 11 months ago by ▴ 80
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0
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729
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Answer: Answer: Finding closest genome from genbank
11 months ago by arshad1292 ▴ 80
0
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1
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729
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Comment: Comment: Finding closest genome from genbank
11 months ago by arshad1292 ▴ 80
0
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0
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652
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Comment: Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
11 months ago by arshad1292 ▴ 80
0
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1
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652
views
Comment: Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
12 months ago by arshad1292 ▴ 80
1
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5
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652
views
Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
shotgun CD-HIT metagenome genome
11 months ago by arshad1292 ▴ 80
0
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1
reply
439
views
Redundancy analysis (RDA) for metagenomic community
bacterial RDA analysis community Redundancy metagenome
updated 13 months ago by ▴ 220 • written 13 months ago by ▴ 80
0
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6
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1.1k
views
ERROR [mem_sam_pe] paired reads have different names -- during binning in metaWRAP pipeline
metawrap
updated 13 months ago by 125k • written 18 months ago by ▴ 80
0
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0
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274
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neutral community model (NCM) analysis
neutral NCM model community
13 months ago by arshad1292 ▴ 80
0
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2
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591
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Comment: Comment: Error in reading tab delimited file
15 months ago by arshad1292 ▴ 80
1
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4
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591
views
Error in reading tab delimited file
R tab-delimited
updated 15 months ago by 21k • written 15 months ago by ▴ 80
0
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0
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433
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Error in (1 - h) * qs[i] : non-numeric argument to binary operator
R moanin time-series
15 months ago by arshad1292 ▴ 80
2
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0
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377
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Answer: Answer: Error while running time series analysis in R
15 months ago by arshad1292 ▴ 80
2
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1
reply
377
views
Error while running time series analysis in R
R moanin time-series
15 months ago by arshad1292 ▴ 80
0
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0
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837
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Comment: Comment: help with time series analysis
15 months ago by arshad1292 ▴ 80
0
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1
reply
837
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Comment: Comment: help with time series analysis
15 months ago by arshad1292 ▴ 80
0
votes
4
replies
837
views
help with time series analysis
time-series readcount time series RNAseq
15 months ago by arshad1292 ▴ 80
0
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0
replies
369
views
RRBS methylation analysis
RRBS analyzer bismark HMST-Seq
15 months ago by arshad1292 ▴ 80
1
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2
replies
510
views
how to generate .bed files for methylation (RRBS) analysis
methylation
updated 16 months ago by 4.4k • written 16 months ago by ▴ 80
0
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0
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357
views
Mapping reads and quantifying genes - Metagenomic workshop
metagenome
17 months ago by arshad1292 ▴ 80
0
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0
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417
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Comment: Comment: Metawrap pipeline doesn't detect samples
17 months ago by arshad1292 ▴ 80
0
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1
reply
417
views
Metawrap pipeline doesn't detect samples
metawrap
17 months ago by arshad1292 ▴ 80
0
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1
reply
1.1k
views
Comment: Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
18 months ago by arshad1292 ▴ 80
0
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0
replies
699
views
Comment: Comment: extracting Genus abundance info from Kraken 2 output file
18 months ago by arshad1292 ▴ 80
0
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2
replies
1.1k
views
Comment: Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
18 months ago by arshad1292 ▴ 80
0
votes
1
reply
699
views
Comment: Comment: extracting Genus abundance info from Kraken 2 output file
18 months ago by arshad1292 ▴ 80
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