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comments
0
votes
0
replies
172
views
How to interpret different reduced models in time series analysis with DESeq2?
time-series
DESeq2
10 weeks ago by
arshad1292
▴ 80
0
votes
0
replies
492
views
Comment:
Comment: Interpreting time-series analysis with DESeq2 output
10 weeks ago by
arshad1292
▴ 80
0
votes
1
reply
492
views
Comment:
Comment: Interpreting time-series analysis with DESeq2 output
11 weeks ago by
arshad1292
▴ 80
0
votes
0
replies
492
views
Comment:
Comment: Interpreting time-series analysis with DESeq2 output
11 weeks ago by
arshad1292
▴ 80
0
votes
2
replies
292
views
labelling selected genes in volcano plot
RNAseq
R
plot
volcano
updated 11 weeks ago by
ATpoint
68k • written 11 weeks ago by
arshad1292
▴ 80
0
votes
2
replies
492
views
Comment:
Comment: Interpreting time-series analysis with DESeq2 output
11 weeks ago by
arshad1292
▴ 80
1
vote
8
replies
492
views
Interpreting time-series analysis with DESeq2 output
time-series
DESeq2
10 weeks ago by
arshad1292
▴ 80
0
votes
0
replies
311
views
Comment:
Comment: How to convert trinotate results into GFF3
11 weeks ago by
arshad1292
▴ 80
1
vote
2
replies
311
views
How to convert trinotate results into GFF3
gff3
gtf
trinotate
11 weeks ago by
arshad1292
▴ 80
1
vote
1
reply
296
views
time-series analysis with DESeq2
time-series
multifactorial
R
DESeq2
updated 12 weeks ago by
Derrik
▴ 40 • written 12 weeks ago by
arshad1292
▴ 80
0
votes
2
replies
403
views
creating a list of genes in python
rnaseq
python
updated 12 weeks ago by
M.O.L.S
▴ 100 • written 12 weeks ago by
arshad1292
▴ 80
0
votes
0
replies
175
views
how to set zorder for volcano plot
matplotlib
python
zorder
volcano
3 months ago by
arshad1292
▴ 80
0
votes
0
replies
237
views
Comment:
Comment: rename so that dot (.) is replaced with underscore (_)
3 months ago by
arshad1292
▴ 80
1
vote
2
replies
237
views
rename so that dot (.) is replaced with underscore (_)
rename
linux
mv
3 months ago by
arshad1292
▴ 80
0
votes
0
replies
241
views
Comment:
Comment: creating a txt file with absolute path to each directory
4 months ago by
arshad1292
▴ 80
1
vote
2
replies
241
views
creating a txt file with absolute path to each directory
shell
linux
script
4 months ago by
arshad1292
▴ 80
0
votes
0
replies
286
views
Comment:
Comment: renaming files and including folder/directory name in it
4 months ago by
arshad1292
▴ 80
0
votes
2
replies
286
views
renaming files and including folder/directory name in it
rename
loop
mv
4 months ago by
arshad1292
▴ 80
0
votes
0
replies
440
views
Comment:
Comment: problem with GTF file
4 months ago by
arshad1292
▴ 80
0
votes
2
replies
440
views
problem with GTF file
gtf
repeatmasker
gff
AGAT
gffread
4 months ago by
arshad1292
▴ 80
0
votes
1
reply
491
views
Comment:
Comment: Confused about bin completion and contamination
7 months ago by
arshad1292
▴ 80
3
votes
3
replies
491
views
Confused about bin completion and contamination
metagenomics
bins
metagenome
updated 7 months ago by
Mensur Dlakic
★ 22k • written 7 months ago by
arshad1292
▴ 80
0
votes
0
replies
423
views
Comment:
Comment: Why we allow contamination during binning?
9 months ago by
arshad1292
▴ 80
3
votes
2
replies
423
views
Why we allow contamination during binning?
completion
MAGs
contamination
metagenomic
metagenome
9 months ago by
arshad1292
▴ 80
2
votes
7
replies
729
views
6 follow
Finding closest genome from genbank
bacterial
genome
blast
genbank
updated 11 months ago by
Juke34
7.5k • written 11 months ago by
arshad1292
▴ 80
0
votes
0
replies
729
views
Answer:
Answer: Finding closest genome from genbank
11 months ago by
arshad1292
▴ 80
0
votes
1
reply
729
views
Comment:
Comment: Finding closest genome from genbank
11 months ago by
arshad1292
▴ 80
0
votes
0
replies
652
views
Comment:
Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
11 months ago by
arshad1292
▴ 80
0
votes
1
reply
652
views
Comment:
Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
12 months ago by
arshad1292
▴ 80
1
vote
5
replies
652
views
Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
shotgun
CD-HIT
metagenome
genome
11 months ago by
arshad1292
▴ 80
0
votes
1
reply
439
views
Redundancy analysis (RDA) for metagenomic community
bacterial
RDA
analysis
community
Redundancy
metagenome
updated 13 months ago by
patrickdm
▴ 220 • written 13 months ago by
arshad1292
▴ 80
0
votes
6
replies
1.1k
views
ERROR [mem_sam_pe] paired reads have different names -- during binning in metaWRAP pipeline
metawrap
updated 13 months ago by
GenoMax
125k • written 18 months ago by
arshad1292
▴ 80
0
votes
0
replies
274
views
neutral community model (NCM) analysis
neutral
NCM
model
community
13 months ago by
arshad1292
▴ 80
0
votes
2
replies
591
views
Comment:
Comment: Error in reading tab delimited file
15 months ago by
arshad1292
▴ 80
1
vote
4
replies
591
views
Error in reading tab delimited file
R
tab-delimited
updated 15 months ago by
cpad0112
21k • written 15 months ago by
arshad1292
▴ 80
0
votes
0
replies
433
views
Error in (1 - h) * qs[i] : non-numeric argument to binary operator
R
moanin
time-series
15 months ago by
arshad1292
▴ 80
2
votes
0
replies
377
views
Answer:
Answer: Error while running time series analysis in R
15 months ago by
arshad1292
▴ 80
2
votes
1
reply
377
views
Error while running time series analysis in R
R
moanin
time-series
15 months ago by
arshad1292
▴ 80
0
votes
0
replies
837
views
Comment:
Comment: help with time series analysis
15 months ago by
arshad1292
▴ 80
0
votes
1
reply
837
views
Comment:
Comment: help with time series analysis
15 months ago by
arshad1292
▴ 80
0
votes
4
replies
837
views
help with time series analysis
time-series
readcount
time
series
RNAseq
15 months ago by
arshad1292
▴ 80
0
votes
0
replies
369
views
RRBS methylation analysis
RRBS
analyzer
bismark
HMST-Seq
15 months ago by
arshad1292
▴ 80
1
vote
2
replies
510
views
how to generate .bed files for methylation (RRBS) analysis
methylation
updated 16 months ago by
colindaven
4.4k • written 16 months ago by
arshad1292
▴ 80
0
votes
0
replies
357
views
Mapping reads and quantifying genes - Metagenomic workshop
metagenome
17 months ago by
arshad1292
▴ 80
0
votes
0
replies
417
views
Comment:
Comment: Metawrap pipeline doesn't detect samples
17 months ago by
arshad1292
▴ 80
0
votes
1
reply
417
views
Metawrap pipeline doesn't detect samples
metawrap
17 months ago by
arshad1292
▴ 80
0
votes
1
reply
1.1k
views
Comment:
Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
18 months ago by
arshad1292
▴ 80
0
votes
0
replies
699
views
Comment:
Comment: extracting Genus abundance info from Kraken 2 output file
18 months ago by
arshad1292
▴ 80
0
votes
2
replies
1.1k
views
Comment:
Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
18 months ago by
arshad1292
▴ 80
0
votes
1
reply
699
views
Comment:
Comment: extracting Genus abundance info from Kraken 2 output file
18 months ago by
arshad1292
▴ 80
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