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comments
0
votes
1
reply
318
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Comment:
Comment: Confused about bin completion and contamination
9 weeks ago by
arshad1292
▴ 70
3
votes
3
replies
318
views
Confused about bin completion and contamination
metagenomics
bins
metagenome
updated 9 weeks ago by
Mensur Dlakic
★ 20k • written 10 weeks ago by
arshad1292
▴ 70
0
votes
0
replies
313
views
Comment:
Comment: Why we allow contamination during binning?
4 months ago by
arshad1292
▴ 70
3
votes
2
replies
313
views
Why we allow contamination during binning?
completion
MAGs
contamination
metagenomic
metagenome
4 months ago by
arshad1292
▴ 70
2
votes
7
replies
571
views
6 follow
Finding closest genome from genbank
bacterial
genome
blast
genbank
updated 5 months ago by
Juke34
7.2k • written 5 months ago by
arshad1292
▴ 70
0
votes
0
replies
571
views
Answer:
Answer: Finding closest genome from genbank
5 months ago by
arshad1292
▴ 70
0
votes
1
reply
571
views
Comment:
Comment: Finding closest genome from genbank
5 months ago by
arshad1292
▴ 70
0
votes
0
replies
492
views
Comment:
Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
5 months ago by
arshad1292
▴ 70
0
votes
1
reply
492
views
Comment:
Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
6 months ago by
arshad1292
▴ 70
1
vote
5
replies
492
views
Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
shotgun
CD-HIT
metagenome
genome
5 months ago by
arshad1292
▴ 70
0
votes
1
reply
337
views
Redundancy analysis (RDA) for metagenomic community
bacterial
RDA
analysis
community
Redundancy
metagenome
updated 8 months ago by
patrickdm
▴ 160 • written 8 months ago by
arshad1292
▴ 70
0
votes
6
replies
944
views
ERROR [mem_sam_pe] paired reads have different names -- during binning in metaWRAP pipeline
metawrap
updated 8 months ago by
GenoMax
119k • written 12 months ago by
arshad1292
▴ 70
0
votes
0
replies
199
views
neutral community model (NCM) analysis
neutral
NCM
model
community
8 months ago by
arshad1292
▴ 70
0
votes
2
replies
452
views
Comment:
Comment: Error in reading tab delimited file
9 months ago by
arshad1292
▴ 70
1
vote
4
replies
452
views
Error in reading tab delimited file
R
tab-delimited
updated 9 months ago by
cpad0112
21k • written 9 months ago by
arshad1292
▴ 70
0
votes
0
replies
312
views
Error in (1 - h) * qs[i] : non-numeric argument to binary operator
R
moanin
time-series
9 months ago by
arshad1292
▴ 70
2
votes
0
replies
266
views
Answer:
Answer: Error while running time series analysis in R
9 months ago by
arshad1292
▴ 70
2
votes
1
reply
266
views
Error while running time series analysis in R
R
moanin
time-series
9 months ago by
arshad1292
▴ 70
0
votes
0
replies
656
views
Comment:
Comment: help with time series analysis
10 months ago by
arshad1292
▴ 70
0
votes
1
reply
656
views
Comment:
Comment: help with time series analysis
10 months ago by
arshad1292
▴ 70
0
votes
4
replies
656
views
help with time series analysis
time-series
readcount
time
series
RNAseq
10 months ago by
arshad1292
▴ 70
0
votes
0
replies
286
views
RRBS methylation analysis
RRBS
analyzer
bismark
HMST-Seq
10 months ago by
arshad1292
▴ 70
1
vote
2
replies
387
views
how to generate .bed files for methylation (RRBS) analysis
methylation
updated 10 months ago by
colindaven
4.0k • written 10 months ago by
arshad1292
▴ 70
0
votes
0
replies
279
views
Mapping reads and quantifying genes - Metagenomic workshop
metagenome
12 months ago by
arshad1292
▴ 70
0
votes
0
replies
336
views
Comment:
Comment: Metawrap pipeline doesn't detect samples
12 months ago by
arshad1292
▴ 70
0
votes
1
reply
336
views
Metawrap pipeline doesn't detect samples
metawrap
12 months ago by
arshad1292
▴ 70
0
votes
1
reply
944
views
Comment:
Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
12 months ago by
arshad1292
▴ 70
0
votes
0
replies
570
views
Comment:
Comment: extracting Genus abundance info from Kraken 2 output file
12 months ago by
arshad1292
▴ 70
0
votes
2
replies
944
views
Comment:
Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
12 months ago by
arshad1292
▴ 70
0
votes
1
reply
570
views
Comment:
Comment: extracting Genus abundance info from Kraken 2 output file
13 months ago by
arshad1292
▴ 70
1
vote
4
replies
570
views
extracting Genus abundance info from Kraken 2 output file
kraken2
updated 12 months ago by
Nitin Narwade
★ 1.2k • written 13 months ago by
arshad1292
▴ 70
0
votes
0
replies
450
views
Comment:
Comment: How to pick top 50 the most abundant pathways?
13 months ago by
arshad1292
▴ 70
1
vote
2
replies
450
views
How to pick top 50 the most abundant pathways?
pathways
abundant
13 months ago by
arshad1292
▴ 70
0
votes
0
replies
1.3k
views
Comment:
Comment: understanding log2fold change of 0.31 and -0.25
13 months ago by
arshad1292
▴ 70
0
votes
0
replies
1.3k
views
Comment:
Comment: understanding log2fold change of 0.31 and -0.25
13 months ago by
arshad1292
▴ 70
3
votes
7
replies
1.3k
views
understanding log2fold change of 0.31 and -0.25
rnaseq
log2FC
13 months ago by
arshad1292
▴ 70
0
votes
3
replies
1.1k
views
antismash 5.0 (New region concept) - counting BGCs
antismash
metagenomics
updated 17 months ago by
timothy.kirkwood
▴ 110 • written 22 months ago by
arshad1292
▴ 70
0
votes
0
replies
459
views
vcf-compare and making Venn diagram
SNP
21 months ago by
arshad1292
▴ 70
0
votes
0
replies
1.1k
views
Comment:
C: antismash 5.0 (New region concept) - counting BGCs
22 months ago by
arshad1292
▴ 70
0
votes
0
replies
695
views
Counting Biosyntheic Gene Clusters (BGC) types from Antismash Output
antismash
metagenomics
22 months ago by
arshad1292
▴ 70
0
votes
0
replies
2.8k
views
Comment:
C: Counting Gene Clusters from Antismash Output
22 months ago by
arshad1292
▴ 70
9
votes
3
replies
3.8k
views
GWAS analysis tool
snp
R
genome
updated 3.8 years ago by
breckuh
▴ 30 • written 4.1 years ago by
arshad1292
▴ 70
0
votes
1
reply
2.2k
views
Comment:
C: How can i get gene name instead of gene ID from prepDE.py after STRINGtie?
3.9 years ago by
arshad1292
▴ 70
0
votes
0
replies
3.7k
views
Comment:
C: gene IDs in stringtie output
3.9 years ago by
arshad1292
▴ 70
0
votes
1
reply
3.7k
views
Comment:
A: gene IDs in stringtie output
3.9 years ago by
arshad1292
▴ 70
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