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Comment: Comment: Confused about bin completion and contamination
9 weeks ago by arshad1292 ▴ 70
3
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3
replies
318
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Confused about bin completion and contamination
metagenomics bins metagenome
updated 9 weeks ago by ★ 20k • written 10 weeks ago by ▴ 70
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0
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313
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Comment: Comment: Why we allow contamination during binning?
4 months ago by arshad1292 ▴ 70
3
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2
replies
313
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Why we allow contamination during binning?
completion MAGs contamination metagenomic metagenome
4 months ago by arshad1292 ▴ 70
2
votes
7
replies
571
views
6 follow
Finding closest genome from genbank
bacterial genome blast genbank
updated 5 months ago by 7.2k • written 5 months ago by ▴ 70
0
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0
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571
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Answer: Answer: Finding closest genome from genbank
5 months ago by arshad1292 ▴ 70
0
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1
reply
571
views
Comment: Comment: Finding closest genome from genbank
5 months ago by arshad1292 ▴ 70
0
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0
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492
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Comment: Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
5 months ago by arshad1292 ▴ 70
0
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1
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492
views
Comment: Comment: Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
6 months ago by arshad1292 ▴ 70
1
vote
5
replies
492
views
Can I use CD-HIT package for shotgun sequencing data (metagenomic) comparsion?
shotgun CD-HIT metagenome genome
5 months ago by arshad1292 ▴ 70
0
votes
1
reply
337
views
Redundancy analysis (RDA) for metagenomic community
bacterial RDA analysis community Redundancy metagenome
updated 8 months ago by ▴ 160 • written 8 months ago by ▴ 70
0
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6
replies
944
views
ERROR [mem_sam_pe] paired reads have different names -- during binning in metaWRAP pipeline
metawrap
updated 8 months ago by 119k • written 12 months ago by ▴ 70
0
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0
replies
199
views
neutral community model (NCM) analysis
neutral NCM model community
8 months ago by arshad1292 ▴ 70
0
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2
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452
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Comment: Comment: Error in reading tab delimited file
9 months ago by arshad1292 ▴ 70
1
vote
4
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452
views
Error in reading tab delimited file
R tab-delimited
updated 9 months ago by 21k • written 9 months ago by ▴ 70
0
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0
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312
views
Error in (1 - h) * qs[i] : non-numeric argument to binary operator
R moanin time-series
9 months ago by arshad1292 ▴ 70
2
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0
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266
views
Answer: Answer: Error while running time series analysis in R
9 months ago by arshad1292 ▴ 70
2
votes
1
reply
266
views
Error while running time series analysis in R
R moanin time-series
9 months ago by arshad1292 ▴ 70
0
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0
replies
656
views
Comment: Comment: help with time series analysis
10 months ago by arshad1292 ▴ 70
0
votes
1
reply
656
views
Comment: Comment: help with time series analysis
10 months ago by arshad1292 ▴ 70
0
votes
4
replies
656
views
help with time series analysis
time-series readcount time series RNAseq
10 months ago by arshad1292 ▴ 70
0
votes
0
replies
286
views
RRBS methylation analysis
RRBS analyzer bismark HMST-Seq
10 months ago by arshad1292 ▴ 70
1
vote
2
replies
387
views
how to generate .bed files for methylation (RRBS) analysis
methylation
updated 10 months ago by 4.0k • written 10 months ago by ▴ 70
0
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0
replies
279
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Mapping reads and quantifying genes - Metagenomic workshop
metagenome
12 months ago by arshad1292 ▴ 70
0
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0
replies
336
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Comment: Comment: Metawrap pipeline doesn't detect samples
12 months ago by arshad1292 ▴ 70
0
votes
1
reply
336
views
Metawrap pipeline doesn't detect samples
metawrap
12 months ago by arshad1292 ▴ 70
0
votes
1
reply
944
views
Comment: Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
12 months ago by arshad1292 ▴ 70
0
votes
0
replies
570
views
Comment: Comment: extracting Genus abundance info from Kraken 2 output file
12 months ago by arshad1292 ▴ 70
0
votes
2
replies
944
views
Comment: Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
12 months ago by arshad1292 ▴ 70
0
votes
1
reply
570
views
Comment: Comment: extracting Genus abundance info from Kraken 2 output file
13 months ago by arshad1292 ▴ 70
1
vote
4
replies
570
views
extracting Genus abundance info from Kraken 2 output file
kraken2
updated 12 months ago by ★ 1.2k • written 13 months ago by ▴ 70
0
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0
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450
views
Comment: Comment: How to pick top 50 the most abundant pathways?
13 months ago by arshad1292 ▴ 70
1
vote
2
replies
450
views
How to pick top 50 the most abundant pathways?
pathways abundant
13 months ago by arshad1292 ▴ 70
0
votes
0
replies
1.3k
views
Comment: Comment: understanding log2fold change of 0.31 and -0.25
13 months ago by arshad1292 ▴ 70
0
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0
replies
1.3k
views
Comment: Comment: understanding log2fold change of 0.31 and -0.25
13 months ago by arshad1292 ▴ 70
3
votes
7
replies
1.3k
views
understanding log2fold change of 0.31 and -0.25
rnaseq log2FC
13 months ago by arshad1292 ▴ 70
0
votes
3
replies
1.1k
views
antismash 5.0 (New region concept) - counting BGCs
antismash metagenomics
updated 17 months ago by ▴ 110 • written 22 months ago by ▴ 70
0
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0
replies
459
views
vcf-compare and making Venn diagram
SNP
21 months ago by arshad1292 ▴ 70
0
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0
replies
1.1k
views
Comment: C: antismash 5.0 (New region concept) - counting BGCs
22 months ago by arshad1292 ▴ 70
0
votes
0
replies
695
views
Counting Biosyntheic Gene Clusters (BGC) types from Antismash Output
antismash metagenomics
22 months ago by arshad1292 ▴ 70
0
votes
0
replies
2.8k
views
Comment: C: Counting Gene Clusters from Antismash Output
22 months ago by arshad1292 ▴ 70
9
votes
3
replies
3.8k
views
GWAS analysis tool
snp R genome
updated 3.8 years ago by ▴ 30 • written 4.1 years ago by ▴ 70
0
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1
reply
2.2k
views
Comment: C: How can i get gene name instead of gene ID from prepDE.py after STRINGtie?
3.9 years ago by arshad1292 ▴ 70
0
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0
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3.7k
views
Comment: C: gene IDs in stringtie output
3.9 years ago by arshad1292 ▴ 70
0
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1
reply
3.7k
views
Comment: A: gene IDs in stringtie output
3.9 years ago by arshad1292 ▴ 70
45 results • Page 1 of 1
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