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0
votes
1
reply
390
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Comment:
Comment: 1000 Genome: Cause of duplicate variants with different genotypes
7 weeks ago by
JourneyToAbyss
▴ 210
0
votes
7
replies
390
views
1000 Genome: Cause of duplicate variants with different genotypes
CrossMap
1000Genome
1000G
updated 7 weeks ago by
Giulio Genovese
▴ 390 • written 7 weeks ago by
JourneyToAbyss
▴ 210
0
votes
1
reply
427
views
Comment:
Comment: Normal number of variants to lose during liftover: GRCh38 to hg19
9 weeks ago by
JourneyToAbyss
▴ 210
0
votes
1
reply
427
views
Comment:
Comment: Normal number of variants to lose during liftover: GRCh38 to hg19
9 weeks ago by
JourneyToAbyss
▴ 210
0
votes
6
replies
427
views
Normal number of variants to lose during liftover: GRCh38 to hg19
liftover
1000genome
CrossMap
updated 9 weeks ago by
Giulio Genovese
▴ 390 • written 9 weeks ago by
JourneyToAbyss
▴ 210
3
votes
2
replies
2.0k
views
Extracting Residuals from Differential Expression Model
statistics
residuals
limma
updated 6 months ago by
Gordon Smyth
★ 6.9k • written 4.7 years ago by
JourneyToAbyss
▴ 210
3
votes
4
replies
1.2k
views
Understanding Used Assembly: Why aren't authors specific about patch version?
1000genomes
GRCh38
gnomad
assembly
freeze
updated 8 months ago by
GenoMax
140k • written 10 months ago by
JourneyToAbyss
▴ 210
0
votes
2
replies
873
views
Help finding GTEx v8 Imputed Genotypes
SHAPEIT
GTEx
updated 17 months ago by
7ehuang
• 0 • written 20 months ago by
JourneyToAbyss
▴ 210
0
votes
1
reply
677
views
Affymetrix Probes and Multiple Alignments
Affymetrix
HG-U133A 2.0
Microarray
updated 3.6 years ago by
Kevin Blighe
87k • written 3.6 years ago by
JourneyToAbyss
▴ 210
0
votes
0
replies
1.1k
views
MatrixEQTL: Inconsistent Results to lm()
MatrixEQTL
lm
missing
4.2 years ago by
JourneyToAbyss
▴ 210
3
votes
1
reply
1.5k
views
Duplicate and Different Annotations using biomaRt
biomaRt
biobase
ensembl
annotations
updated 4.5 years ago by
Kevin Blighe
87k • written 4.5 years ago by
JourneyToAbyss
▴ 210
0
votes
0
replies
860
views
MatrixEQTL: Pre-processing steps
matrixEQTL
4.6 years ago by
JourneyToAbyss
▴ 210
3
votes
1
reply
1.3k
views
GTOOL and Plink: Single Dosage Probabilities
plink
gtool
4.8 years ago by
JourneyToAbyss
▴ 210
0
votes
0
replies
1.4k
views
Comment:
C: How are plink's hardcalls calculated?
4.8 years ago by
JourneyToAbyss
▴ 210
0
votes
1
reply
1.4k
views
Comment:
A: How are plink's hardcalls calculated?
4.8 years ago by
JourneyToAbyss
▴ 210
8
votes
4
replies
1.4k
views
How are plink's hardcalls calculated?
plink
4.8 years ago by
JourneyToAbyss
▴ 210
4
votes
1
reply
2.0k
views
Unable to query specific ensembl ID through biomaRt (R) or mygene (Python)
ensembl
mygene
biomart
gene symbols
ensembl ID
5.1 years ago by
JourneyToAbyss
▴ 210
3
votes
2
replies
2.0k
views
Difficulty Converting lncRNA gene symbol to Ensembl
gene symbol
ensembl
agilent
microarray
updated 5.2 years ago by
GouthamAtla
12k • written 5.2 years ago by
JourneyToAbyss
▴ 210
1
vote
1
reply
1.0k
views
Differential Expression of lncRNAs in Brain --- Can a database aid my search?
lncRNA
differential expression
database
updated 5.2 years ago by
piyushjo
▴ 700 • written 5.2 years ago by
JourneyToAbyss
▴ 210
40
votes
6
replies
29k
views
Plink: Understanding LD Clumping vs Pruning
Plink
eQTL
LD
Clumping
Pruning
updated 5.4 years ago by
Kevin Blighe
87k • written 5.4 years ago by
JourneyToAbyss
▴ 210
2
votes
1
reply
1.2k
views
Plink: Proper file format for linkage disequilibirum
plink
updated 5.5 years ago by
Ram
43k • written 5.5 years ago by
JourneyToAbyss
▴ 210
1
vote
1
reply
889
views
Updating INDEL SNP positions
SNP
updated 5.6 years ago by
finswimmer
16k • written 5.6 years ago by
JourneyToAbyss
▴ 210
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