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6
votes
3
replies
3.9k
views
split vcf by individual
vcftools vcf-subset SNP vcf
written 7.0 years ago by ▴ 170
2
votes
3
replies
4.0k
views
selscan not outputting ihs
selscan haplotypes vcf
updated 4.2 years ago by ▴ 10 • written 6.5 years ago by ▴ 170
0
votes
1
reply
1.9k
views
Comment: C: Perform PCA for mtDNA MSA Data
4.8 years ago by biosol ▴ 170
0
votes
0
replies
2.0k
views
Comment: C: merging .vcf files for mitochondrial SNPs
4.8 years ago by biosol ▴ 170
0
votes
1
reply
6.3k
views
Comment: C: Calculating Tajima's D from vcf data using bed files
4.8 years ago by biosol ▴ 170
1
vote
0
replies
2.0k
views
Comment: C: update genotype calls with PyVCF
5.0 years ago by biosol ▴ 170
2
votes
2
replies
2.0k
views
update genotype calls with PyVCF
pyvcf genotypes
updated 5.0 years ago by 166k • written 5.0 years ago by ▴ 170
0
votes
0
replies
1.1k
views
Manhattan plot with Bayes factor
R CMplot qqman
updated 5.1 years ago by 20 • written 6.4 years ago by ▴ 170
0
votes
0
replies
890
views
1000Genomes exome vcf
1000genomes vcf exome
5.5 years ago by biosol ▴ 170
1
vote
1
reply
3.4k
views
Comment: C: PGDSPider VCF to BAYENV
5.5 years ago by biosol ▴ 170
3
votes
3
replies
3.4k
views
PGDSPider VCF to BAYENV
PGDSpider VCF Bayenv2
updated 5.5 years ago by ▴ 50 • written 6.8 years ago by ▴ 170
1
vote
0
replies
901
views
qvalue for PBS
qvalue PBS R
5.5 years ago by biosol ▴ 170
0
votes
1
reply
1.4k
views
Comment: C: align specific region of human to panTro6
5.6 years ago by biosol ▴ 170
0
votes
0
replies
1.4k
views
Comment: C: align specific region of human to panTro6
5.6 years ago by biosol ▴ 170
0
votes
1
reply
1.4k
views
Comment: C: align specific region of human to panTro6
5.6 years ago by biosol ▴ 170
1
vote
6
replies
1.4k
views
align specific region of human to panTro6
alignment panTro6
updated 5.6 years ago by 13k • written 5.6 years ago by ▴ 170
0
votes
0
replies
1.5k
views
Comment: C: twoBitToFa retrieving longer sequence than expected in hg19
5.7 years ago by biosol ▴ 170
2
votes
3
replies
1.5k
views
twoBitToFa retrieving longer sequence than expected in hg19
twoBitToFa hg19
updated 5.7 years ago by ▴ 570 • written 5.7 years ago by ▴ 170
0
votes
0
replies
5.5k
views
Comment: C: Converting ms or msms output to PLINK or VCF files
5.7 years ago by biosol ▴ 170
12
votes
8
replies
8.7k
views
1000Genomes population allele frequencies for list of SNPs
snps 1000Genomes
updated 5.8 years ago by 20 • written 6.9 years ago by ▴ 170
4
votes
8
replies
2.7k
views
gene ontology with reference list
RNA-Seq gene ontology
updated 6.0 years ago by ▴ 20 • written 6.1 years ago by ▴ 170
0
votes
0
replies
2.7k
views
Comment: C: gene ontology with reference list
6.1 years ago by biosol ▴ 170
0
votes
1
reply
2.7k
views
Comment: C: gene ontology with reference list
6.1 years ago by biosol ▴ 170
0
votes
1
reply
1.5k
views
mitochondrial DNA in vcf for haplogrep2
haplogrep2 mtDNA vcf
6.2 years ago by biosol ▴ 170
0
votes
0
replies
2.8k
views
Comment: C: extract genes and functions +/-50kb around a SNP
6.4 years ago by biosol ▴ 170
0
votes
1
reply
2.8k
views
Comment: C: extract genes and functions +/-50kb around a SNP
6.4 years ago by biosol ▴ 170
0
votes
1
reply
2.8k
views
Comment: C: extract genes and functions +/-50kb around a SNP
6.4 years ago by biosol ▴ 170
5
votes
10
replies
2.8k
views
extract genes and functions +/-50kb around a SNP
SNP gwas
6.4 years ago by biosol ▴ 170
0
votes
0
replies
2.2k
views
Comment: C: bayenv2: "initial epsilon zero or 1 locus 6912"
6.4 years ago by biosol ▴ 170
1
vote
3
replies
2.2k
views
bayenv2: "initial epsilon zero or 1 locus 6912"
bayenv2 snps
updated 4.0 years ago by ▴ 160 • written 6.4 years ago by ▴ 170
0
votes
1
reply
3.2k
views
Comment: C: heatmap with plink genome file
6.5 years ago by biosol ▴ 170
5
votes
3
replies
3.2k
views
heatmap with plink genome file
R plink IBD
updated 6.5 years ago by 12k • written 6.5 years ago by ▴ 170
3
votes
2
replies
4.8k
views
LD filter for GWAS with plink
plink gwas linkage disequilibrium
6.7 years ago by biosol ▴ 170
1
vote
0
replies
9.9k
views
Comment: C: Beagle imputation results quality control
6.7 years ago by biosol ▴ 170
0
votes
0
replies
2.5k
views
Comment: C: update genotypes in vcf
6.8 years ago by biosol ▴ 170
0
votes
1
reply
2.5k
views
Comment: C: update genotypes in vcf
6.8 years ago by biosol ▴ 170
2
votes
5
replies
2.5k
views
update genotypes in vcf
vcf genotypes
6.8 years ago by biosol ▴ 170
0
votes
0
replies
2.2k
views
Comment: C: Change ALT field in VCF
6.8 years ago by biosol ▴ 170
0
votes
2
replies
2.2k
views
Change ALT field in VCF
vcf snps gwas
6.8 years ago by biosol ▴ 170
0
votes
0
replies
2.8k
views
Comment: C: vcf-merge outputting all genotypes as ./.
6.8 years ago by biosol ▴ 170
0
votes
1
reply
2.8k
views
Comment: C: vcf-merge outputting all genotypes as ./.
6.8 years ago by biosol ▴ 170
0
votes
1
reply
2.8k
views
Comment: C: vcf-merge outputting all genotypes as ./.
6.8 years ago by biosol ▴ 170
0
votes
1
reply
2.8k
views
Comment: C: vcf-merge outputting all genotypes as ./.
6.8 years ago by biosol ▴ 170
0
votes
1
reply
2.8k
views
Comment: C: vcf-merge outputting all genotypes as ./.
6.8 years ago by biosol ▴ 170
0
votes
9
replies
2.8k
views
vcf-merge outputting all genotypes as ./.
vcf-merge vcf
6.8 years ago by biosol ▴ 170
0
votes
0
replies
2.2k
views
spid file in PGDSpider-cli
PGDSpider spid
6.8 years ago by biosol ▴ 170
0
votes
0
replies
9.9k
views
Comment: C: Beagle imputation results quality control
6.8 years ago by biosol ▴ 170
0
votes
1
reply
8.7k
views
Comment: C: 1000Genomes population allele frequencies for list of SNPs
6.9 years ago by biosol ▴ 170
1
vote
1
reply
3.0k
views
mean Tajima's D value
Tajima's D SNP
updated 7.0 years ago by ▴ 180 • written 7.0 years ago by ▴ 170
1
vote
0
replies
8.7k
views
Answer: A: vcftools --TajimaD in sliding windows
7.0 years ago by biosol ▴ 170
53 results • Page 1 of 2
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