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Comment: Comment: edgeR batch effect model matrix sanity check
3 months ago by kmyers2 ▴ 90
4
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2
replies
430
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edgeR batch effect model matrix sanity check
R edgeR RNA-seq batch-effect
3 months ago by kmyers2 ▴ 90
0
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0
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1.4k
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Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
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1
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1.4k
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Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
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0
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1.4k
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Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
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1
reply
1.4k
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Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
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1
reply
1.4k
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Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
votes
18
replies
1.4k
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Import list and assign distinct colors in R
R ggplot2
6 months ago by kmyers2 ▴ 90
0
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1
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1.4k
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Answer: Answer: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
votes
1
reply
1.4k
views
Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
votes
0
replies
1.4k
views
Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
votes
1
reply
1.4k
views
Comment: Comment: Import list and assign distinct colors in R
6 months ago by kmyers2 ▴ 90
0
votes
0
replies
700
views
Comment: Comment: htseq-count reports count values for deleted genes
13 months ago by kmyers2 ▴ 90
0
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1
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700
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Comment: Comment: htseq-count reports count values for deleted genes
13 months ago by kmyers2 ▴ 90
1
vote
4
replies
700
views
htseq-count reports count values for deleted genes
rna-seq htseq
13 months ago by kmyers2 ▴ 90
0
votes
1
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628
views
Comment: Comment: Tool to detect gene replacement in bacteria with NGS
2.1 years ago by kmyers2 ▴ 90
1
vote
3
replies
628
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Tool to detect gene replacement in bacteria with NGS
deletions genes NGS bacteria
updated 2.1 years ago by 4.3k • written 2.1 years ago by ▴ 90
0
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0
replies
497
views
Finding indel at end of contig with nucmer
mummer snps indel nucmer
2.6 years ago by kmyers2 ▴ 90
1
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0
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1.6k
views
Comment: Comment: Merge two multi-chromosome WIG files
2.7 years ago by kmyers2 ▴ 90
6
votes
3
replies
1.6k
views
Merge two multi-chromosome WIG files
wiggle bigwig wig
updated 2.7 years ago by 35k • written 2.7 years ago by ▴ 90
1
vote
0
replies
1.6k
views
Answer: Answer: Merge two multi-chromosome WIG files
2.7 years ago by kmyers2 ▴ 90
1
vote
1
reply
2.4k
views
Parsing SRA summary using Biopython Entrez
python biopython entrez sra xml
updated 4.0 years ago by 101k • written 4.0 years ago by ▴ 90
1
vote
2
replies
1.2k
views
Find and Download GenBank File for Whole Genome using Entrez
ncbi entrez genbank python biopython
updated 4.5 years ago by 20 • written 4.6 years ago by ▴ 90
0
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0
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2.1k
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Comment: C: Analyzing SortMeRNA extracted 16S rRNA
4.5 years ago by kmyers2 ▴ 90
1
vote
2
replies
2.1k
views
Analyzing SortMeRNA extracted 16S rRNA
sortmerna Assembly de novo 16S metagenomics
updated 4.5 years ago by 35k • written 4.5 years ago by ▴ 90
0
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0
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1.2k
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Comment: C: Find and Download GenBank File for Whole Genome using Entrez
4.6 years ago by kmyers2 ▴ 90
0
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0
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1.1k
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Comment: C: LexWords perl module for ProDeGe software
4.6 years ago by kmyers2 ▴ 90
0
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0
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1.1k
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Comment: C: LexWords perl module for ProDeGe software
4.6 years ago by kmyers2 ▴ 90
5
votes
4
replies
1.1k
views
LexWords perl module for ProDeGe software
perl prodege installation module lexwords
4.6 years ago by kmyers2 ▴ 90
1
vote
1
reply
1.4k
views
Comment: C: Parsing an ExpressionSet for all SRA addresses
4.9 years ago by kmyers2 ▴ 90
5
votes
3
replies
1.4k
views
Parsing an ExpressionSet for all SRA addresses
RNA-Seq SRA R expressionSet parse
updated 4.9 years ago by ★ 1.6k • written 4.9 years ago by ▴ 90
1
vote
1
reply
1.6k
views
GEOquery with local files
geoquery r ncbi geo
updated 5.0 years ago by ★ 1.4k • written 5.0 years ago by ▴ 90
0
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1
reply
3.4k
views
Comment: C: Combining all columns in multiple files into one based on shared common field
5.3 years ago by kmyers2 ▴ 90
3
votes
3
replies
3.4k
views
Combining all columns in multiple files into one based on shared common field
python pandas join merge temp
5.3 years ago by kmyers2 ▴ 90
0
votes
1
reply
1.3k
views
Using GEOquery to download multiple expression data series files and then combine
RNA-Seq expression array NCBI GEO R
updated 5.4 years ago by 88k • written 5.4 years ago by ▴ 90
0
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0
replies
1.3k
views
Low HTseq Feature Counts in Subset of RNA-seq Samples
htseq rnaseq feature counts alignment
5.6 years ago by kmyers2 ▴ 90
0
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0
replies
1.0k
views
Comment: C: Statistical Tests for Two Data Tables
5.7 years ago by kmyers2 ▴ 90
0
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1
reply
1.0k
views
Comment: C: Statistical Tests for Two Data Tables
5.7 years ago by kmyers2 ▴ 90
5
votes
4
replies
1.0k
views
Statistical Tests for Two Data Tables
R
5.7 years ago by kmyers2 ▴ 90
0
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0
replies
3.1k
views
Comment: C: EdgeR with Paired Sample Replicates
5.8 years ago by kmyers2 ▴ 90
0
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1
reply
3.1k
views
Comment: C: EdgeR with Paired Sample Replicates
5.8 years ago by kmyers2 ▴ 90
3
votes
4
replies
3.1k
views
EdgeR with Paired Sample Replicates
edgeR R RNA-Seq
updated 5.8 years ago by 8.3k • written 5.8 years ago by ▴ 90
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