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3
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1
reply
528
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Filter SAM file for read pairs that align on same strand
samtools alignment sam
updated 7 months ago by 166k • written 7 months ago by ▴ 90
0
votes
0
replies
868
views
Comment: Comment: edgeR batch effect model matrix sanity check
15 months ago by kmyers2 ▴ 90
4
votes
2
replies
868
views
edgeR batch effect model matrix sanity check
R edgeR RNA-seq batch-effect
15 months ago by kmyers2 ▴ 90
0
votes
0
replies
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
1
reply
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
0
replies
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
1
reply
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
1
reply
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
18
replies
2.3k
views
Import list and assign distinct colors in R
R ggplot2
18 months ago by kmyers2 ▴ 90
0
votes
1
reply
2.3k
views
Answer: Answer: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
1
reply
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
0
replies
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
1
reply
2.3k
views
Comment: Comment: Import list and assign distinct colors in R
18 months ago by kmyers2 ▴ 90
0
votes
0
replies
1.0k
views
Comment: Comment: htseq-count reports count values for deleted genes
2.0 years ago by kmyers2 ▴ 90
0
votes
1
reply
1.0k
views
Comment: Comment: htseq-count reports count values for deleted genes
2.0 years ago by kmyers2 ▴ 90
1
vote
4
replies
1.0k
views
htseq-count reports count values for deleted genes
rna-seq htseq
2.0 years ago by kmyers2 ▴ 90
0
votes
1
reply
886
views
Comment: Comment: Tool to detect gene replacement in bacteria with NGS
3.1 years ago by kmyers2 ▴ 90
1
vote
3
replies
886
views
Tool to detect gene replacement in bacteria with NGS
deletions genes NGS bacteria
updated 3.1 years ago by 5.1k • written 3.1 years ago by ▴ 90
0
votes
0
replies
681
views
Finding indel at end of contig with nucmer
mummer snps indel nucmer
3.6 years ago by kmyers2 ▴ 90
1
vote
0
replies
2.3k
views
Comment: Comment: Merge two multi-chromosome WIG files
3.7 years ago by kmyers2 ▴ 90
6
votes
3
replies
2.3k
views
Merge two multi-chromosome WIG files
wiggle bigwig wig
updated 3.7 years ago by 36k • written 3.7 years ago by ▴ 90
1
vote
0
replies
2.3k
views
Answer: Answer: Merge two multi-chromosome WIG files
3.7 years ago by kmyers2 ▴ 90
1
vote
1
reply
3.1k
views
Parsing SRA summary using Biopython Entrez
python biopython entrez sra xml
updated 4.9 years ago by 103k • written 4.9 years ago by ▴ 90
1
vote
2
replies
1.4k
views
Find and Download GenBank File for Whole Genome using Entrez
ncbi entrez genbank python biopython
updated 5.4 years ago by 20 • written 5.5 years ago by ▴ 90
0
votes
0
replies
2.4k
views
Comment: C: Analyzing SortMeRNA extracted 16S rRNA
5.4 years ago by kmyers2 ▴ 90
1
vote
2
replies
2.4k
views
Analyzing SortMeRNA extracted 16S rRNA
sortmerna Assembly de novo 16S metagenomics
updated 5.4 years ago by 35k • written 5.4 years ago by ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: Find and Download GenBank File for Whole Genome using Entrez
5.5 years ago by kmyers2 ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: LexWords perl module for ProDeGe software
5.6 years ago by kmyers2 ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: LexWords perl module for ProDeGe software
5.6 years ago by kmyers2 ▴ 90
5
votes
4
replies
1.4k
views
LexWords perl module for ProDeGe software
perl prodege installation module lexwords
5.6 years ago by kmyers2 ▴ 90
1
vote
1
reply
1.7k
views
Comment: C: Parsing an ExpressionSet for all SRA addresses
5.9 years ago by kmyers2 ▴ 90
5
votes
3
replies
1.7k
views
Parsing an ExpressionSet for all SRA addresses
RNA-Seq SRA R expressionSet parse
updated 5.9 years ago by ★ 1.7k • written 5.9 years ago by ▴ 90
1
vote
1
reply
1.8k
views
GEOquery with local files
geoquery r ncbi geo
updated 5.9 years ago by ★ 1.4k • written 5.9 years ago by ▴ 90
0
votes
1
reply
3.8k
views
Comment: C: Combining all columns in multiple files into one based on shared common field
6.2 years ago by kmyers2 ▴ 90
3
votes
3
replies
3.8k
views
Combining all columns in multiple files into one based on shared common field
python pandas join merge temp
6.2 years ago by kmyers2 ▴ 90
0
votes
1
reply
1.5k
views
Using GEOquery to download multiple expression data series files and then combine
RNA-Seq expression array NCBI GEO R
updated 6.3 years ago by 89k • written 6.4 years ago by ▴ 90
0
votes
0
replies
1.5k
views
Low HTseq Feature Counts in Subset of RNA-seq Samples
htseq rnaseq feature counts alignment
6.5 years ago by kmyers2 ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: Statistical Tests for Two Data Tables
6.6 years ago by kmyers2 ▴ 90
0
votes
1
reply
1.4k
views
Comment: C: Statistical Tests for Two Data Tables
6.6 years ago by kmyers2 ▴ 90
5
votes
4
replies
1.4k
views
Statistical Tests for Two Data Tables
R
6.6 years ago by kmyers2 ▴ 90
0
votes
0
replies
3.6k
views
Comment: C: EdgeR with Paired Sample Replicates
6.8 years ago by kmyers2 ▴ 90
0
votes
1
reply
3.6k
views
Comment: C: EdgeR with Paired Sample Replicates
6.8 years ago by kmyers2 ▴ 90
3
votes
4
replies
3.6k
views
EdgeR with Paired Sample Replicates
edgeR R RNA-Seq
updated 6.8 years ago by 8.4k • written 6.8 years ago by ▴ 90
43 results • Page 1 of 1
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