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2
votes
2
replies
240
views
Looking for a simple tool to match 6-mers (such as TGATCA) to motifs
motif.
updated 4 months ago by 152k • written 4 months ago by ▴ 70
0
votes
0
replies
124
views
Identify each segment and breakpoints in segmental duplication
duplication segmental dotplot
5 months ago by changxu.fan ▴ 70
0
votes
1
reply
444
views
Comment: Comment: homer annotatePeaks.pl: is it possible to adjust the threshold for motif scan?
7 months ago by changxu.fan ▴ 70
1
vote
3
replies
444
views
homer annotatePeaks.pl: is it possible to adjust the threshold for motif scan?
homer
updated 7 months ago by ▴ 590 • written 7 months ago by ▴ 70
1
vote
0
replies
183
views
An IGV track type to display numerical data and categorical data simultaneously
igv
9 months ago by changxu.fan ▴ 70
0
votes
1
reply
405
views
Comment: Comment: Looking for a tool to test for positive selection in enhancer
10 months ago by changxu.fan ▴ 70
0
votes
3
replies
405
views
Looking for a tool to test for positive selection in enhancer
positive selection
updated 10 months ago by ▴ 320 • written 10 months ago by ▴ 70
0
votes
1
reply
487
views
Comment: Comment: How to interpret the log-likelihood values of phyml results?
11 months ago by changxu.fan ▴ 70
3
votes
3
replies
487
views
How to interpret the log-likelihood values of phyml results?
phyml
updated 11 months ago by ★ 22k • written 11 months ago by ▴ 70
0
votes
0
replies
274
views
Best tools for calling structural variants from 2 assemblies?
genetics variants genomics comparative population evolution
16 months ago by changxu.fan ▴ 70
0
votes
0
replies
1.2k
views
Comment: Comment: How to change the track background color of IGV
17 months ago by changxu.fan ▴ 70
0
votes
2
replies
1.2k
views
How to change the track background color of IGV
IGV
17 months ago by changxu.fan ▴ 70
1
vote
1
reply
585
views
Best current tool for deconvolution of bulk sample
cibersort
updated 18 months ago by ▴ 170 • written 18 months ago by ▴ 70
0
votes
0
replies
277
views
Looking for a table of gene expression from Encode RNA-seq experiments
encode
20 months ago by changxu.fan ▴ 70
0
votes
2
replies
946
views
how to get total number of reads in a IGV view
igv
updated 21 months ago by 125k • written 21 months ago by ▴ 70
0
votes
0
replies
1.5k
views
Comment: C: How to use Rsamtools to extracting reads map into single chromosome from BAM fil
23 months ago by changxu.fan ▴ 70
16
votes
14
replies
4.9k
views
How to change cellranger multimapping algorithm
RNA-Seq
updated 2.1 years ago by ★ 1.8k • written 4.1 years ago by ▴ 70
0
votes
0
replies
455
views
Looking for a fast way to visualize the same region of many Hi-C datasets together
Hi-C juicer juicebox
2.3 years ago by changxu.fan ▴ 70
0
votes
0
replies
425
views
The best pacakge to annotate a set of regions
annotate R cage
2.3 years ago by changxu.fan ▴ 70
2
votes
1
reply
932
views
recommendation needed: scRNA-seq batch effect correction methods that can be used for differential expression
batch effect RNA-Seq single cell
updated 2.5 years ago by 68k • written 2.5 years ago by ▴ 70
2
votes
1
reply
618
views
Looking for an annotation-aware sequence alignment visualization tool
alignment genome jalview
updated 2.5 years ago by ▴ 220 • written 2.5 years ago by ▴ 70
0
votes
1
reply
541
views
How to customize the attibutes of geo datasets?
ncbi geo
updated 3.1 years ago by ▴ 40 • written 3.1 years ago by ▴ 70
0
votes
0
replies
4.9k
views
Comment: C: How to change cellranger multimapping algorithm
4.0 years ago by changxu.fan ▴ 70
0
votes
1
reply
4.9k
views
Comment: C: How to change cellranger multimapping algorithm
4.0 years ago by changxu.fan ▴ 70
0
votes
1
reply
4.9k
views
Comment: C: How to change cellranger multimapping algorithm
4.0 years ago by changxu.fan ▴ 70
2
votes
0
replies
4.9k
views
Comment: C: How to change cellranger multimapping algorithm
4.1 years ago by changxu.fan ▴ 70
26 results • Page 1 of 1
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