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questions
1
vote
4
replies
1.0k
views
I want to calculate if the sample has whole genome duplication event or not?
sequencing
wgs
5 months ago by
Hyper_Odin
▴ 320
0
votes
1
reply
469
views
Sequencing depth in WGS CCLE samples?
sequencing
updated 14 months ago by
ATpoint
84k • written 14 months ago by
Hyper_Odin
▴ 320
1
vote
6
replies
1.4k
views
GISTIC from ASCAT
alteration
copy-number
sequencing
15 months ago by
Hyper_Odin
▴ 320
0
votes
2
replies
673
views
Need help with IGV interpretation
WGS
IGV
Sequencing
18 months ago by
Hyper_Odin
▴ 320
0
votes
5
replies
972
views
How to separate combined values?
data
manipulation
r
2.1 years ago by
Hyper_Odin
▴ 320
3
votes
3
replies
1.3k
views
Which is the correct way of visualizing TPM values?
rnaseq
sequencing
updated 2.1 years ago by
Ram
44k • written 2.1 years ago by
Hyper_Odin
▴ 320
0
votes
2
replies
633
views
Downstream Analysis of snvs
snv
sequencing
exome
2.1 years ago by
Hyper_Odin
▴ 320
1
vote
1
reply
504
views
Finding common pattern among heterogenous group of cancer
rnaseq
sequencing
updated 2.2 years ago by
Matthias Zepper
4.9k • written 2.2 years ago by
Hyper_Odin
▴ 320
0
votes
0
replies
416
views
Help with VCF-Validator
sequencing
snp
2.4 years ago by
Hyper_Odin
▴ 320
0
votes
0
replies
497
views
Geneglobe results sus?
sequencing
miRNA
UMI
2.8 years ago by
Hyper_Odin
▴ 320
0
votes
1
reply
955
views
what is the best tool to remove PCR duplicates from miRNA seq without UMI?
mirna-seq
sequencing
updated 15 months ago by
Ram
44k • written 3.3 years ago by
Hyper_Odin
▴ 320
1
vote
4
replies
1.1k
views
is it possible to extract all the exome information from WGS?
genome
sequencing
updated 3.5 years ago by
Michael
55k • written 3.5 years ago by
Hyper_Odin
▴ 320
0
votes
2
replies
496
views
Selecting Samples based on Clustering
RNA-Seq
sequencing
gene
3.6 years ago by
Hyper_Odin
▴ 320
1
vote
3
replies
1.6k
views
Error in GATK HaplotypeCaller
alignment
Assembly
SNP
genome
3.7 years ago by
Hyper_Odin
▴ 320
4
votes
7
replies
2.4k
views
WGCNA "trait" file format?
RNA-Seq
sequencing
R
gene
updated 3.9 years ago by
Prakash
★ 2.2k • written 4.3 years ago by
Hyper_Odin
▴ 320
0
votes
0
replies
814
views
Which counts are to be considered when using Noiseq?
RNA-Seq
sequencing
4.7 years ago by
Hyper_Odin
▴ 320
0
votes
1
reply
1.1k
views
Unable to convert txt to gtf format
next-gen
python
4.8 years ago by
Hyper_Odin
▴ 320
1
vote
6
replies
1.5k
views
CPAT error while analysis
RNA-Seq
gene
software error
updated 4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k • written 4.9 years ago by
Hyper_Odin
▴ 320
2
votes
2
replies
1.1k
views
How to Annotate Long non coding RNA?
RNA-Seq
sequencing
alignment
updated 5.0 years ago by
27atcggcta27
▴ 180 • written 5.0 years ago by
Hyper_Odin
▴ 320
6
votes
7
replies
5.3k
views
6 follow
UMI Tools Dedup
RNA-Seq
umitools
next-gen
updated 15 months ago by
Ram
44k • written 5.5 years ago by
Hyper_Odin
▴ 320
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