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0
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0
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279
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Merging Imputed VCF with Reference Panel VCF
VCF GLIMPSE Imputation
3 months ago by selplat21 ▴ 20
0
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0
replies
686
views
Comment: Comment: Plotting LD heat map with plink.ld result
5 months ago by selplat21 ▴ 20
2
votes
2
replies
686
views
Plotting LD heat map with plink.ld result
R
5 months ago by selplat21 ▴ 20
0
votes
1
reply
492
views
Comment: Comment: Header too long for bam format
5 months ago by selplat21 ▴ 20
2
votes
3
replies
492
views
Header too long for bam format
samtools alignments
updated 5 months ago by 44k • written 5 months ago by ▴ 20
0
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0
replies
619
views
Comment: Comment: Download data from data dryad using CLI?
5 months ago by selplat21 ▴ 20
1
vote
3
replies
619
views
Download data from data dryad using CLI?
datadryad
5 months ago by selplat21 ▴ 20
0
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1
reply
419
views
Comment: Comment: Bcftools consensus unexpected output
7 months ago by selplat21 ▴ 20
0
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3
replies
419
views
Bcftools consensus unexpected output
Bcftools
updated 7 months ago by 44k • written 7 months ago by ▴ 20
0
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0
replies
381
views
Bcftools consensus when reference is a deletion
consensus vcf
13 months ago by selplat21 ▴ 20
0
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0
replies
345
views
Bcftools Consensus - Choose Random Allele for Heterozygous Sites
bcftools
updated 14 months ago by 44k • written 14 months ago by ▴ 20
0
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0
replies
430
views
Sample based on allele frequency matching between two files
linkage
updated 20 months ago by 44k • written 20 months ago by ▴ 20
0
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0
replies
750
views
Comment: Comment: Removing or Setting pairs to NA based on conditions in another data frame (R)
2.5 years ago by selplat21 ▴ 20
3
votes
2
replies
750
views
Removing or Setting pairs to NA based on conditions in another data frame (R)
R
2.5 years ago by selplat21 ▴ 20
2
votes
2
replies
925
views
Set random genotypes to missing in VCF file by individuals and sites
imputation
2.5 years ago by selplat21 ▴ 20
0
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0
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925
views
Comment: Comment: Set random genotypes to missing in VCF file by individuals and sites
2.5 years ago by selplat21 ▴ 20
1
vote
5
replies
1.2k
views
Convert rows to columns delimited by each SNP ID
vcf linux bimbam
updated 2.5 years ago by 148k • written 2.5 years ago by ▴ 20
1
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0
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1.2k
views
Answer: Answer: Convert rows to columns delimited by each SNP ID
updated 2.5 years ago by 148k • written 2.5 years ago by ▴ 20
0
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0
replies
1.2k
views
Comment: Comment: Convert rows to columns delimited by each SNP ID
2.5 years ago by selplat21 ▴ 20
0
votes
0
replies
1.2k
views
Comment: Comment: Convert rows to columns delimited by each SNP ID
2.5 years ago by selplat21 ▴ 20
0
votes
1
reply
1.2k
views
Comment: Comment: Convert rows to columns delimited by each SNP ID
2.5 years ago by selplat21 ▴ 20
1
vote
2
replies
671
views
Extract Reads with Allele Type in IGV
Genomics alignment
updated 2.1 years ago by 44k • written 2.9 years ago by ▴ 20
0
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0
replies
671
views
Comment: Comment: Extract Reads with Allele Type in IGV
2.9 years ago by selplat21 ▴ 20
0
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1
reply
877
views
Comment: Comment: Add Chromosome Breaks and Labels to Continuous x-axis in R
2.9 years ago by selplat21 ▴ 20
1
vote
3
replies
877
views
Add Chromosome Breaks and Labels to Continuous x-axis in R
R
updated 2.9 years ago by 12k • written 2.9 years ago by ▴ 20
0
votes
0
replies
899
views
Comment: Comment: Loop for interval range based on chromosome sizes
3.0 years ago by selplat21 ▴ 20
2
votes
1
reply
640
views
Filter VCF file by list of sites.
vcf filtering genomics
updated 3.0 years ago by 164k • written 3.0 years ago by ▴ 20
0
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0
replies
899
views
Comment: Comment: Loop for interval range based on chromosome sizes
3.0 years ago by selplat21 ▴ 20
0
votes
3
replies
899
views
Loop for interval range based on chromosome sizes
chromosomes genomics
updated 23 months ago by 44k • written 3.0 years ago by ▴ 20
0
votes
0
replies
742
views
Modifying Genbank Contamination File for Bedtools
Genome-Assembly Linux
updated 3.4 years ago by 44k • written 3.5 years ago by ▴ 20
1
vote
1
reply
679
views
For loop to generate mean for each measurement by sex
R
updated 22 months ago by 44k • written 4.1 years ago by ▴ 20
0
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0
replies
1.1k
views
Comment: C: Linear Model Loop in R
4.2 years ago by selplat21 ▴ 20
1
vote
6
replies
1.1k
views
Linear Model Loop in R
R
updated 20 months ago by 44k • written 4.2 years ago by ▴ 20
0
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0
replies
1.1k
views
Comment: C: Linear Model Loop in R
4.2 years ago by selplat21 ▴ 20
0
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0
replies
1.1k
views
Comment: C: Linear Model Loop in R
4.2 years ago by selplat21 ▴ 20
1
vote
1
reply
870
views
Imputation on low coverage samples
next-gen popgen imputation sequencing
4.2 years ago by selplat21 ▴ 20
1
vote
3
replies
963
views
Summing Chromosome Sizes
R sequencing
updated 4.2 years ago by 13k • written 4.2 years ago by ▴ 20
0
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0
replies
963
views
Comment: C: Summing Chromosome Sizes
4.2 years ago by selplat21 ▴ 20
0
votes
0
replies
1.3k
views
RepeatModeler - Everything works except LTR Harvest
assembly genome next-gen sequencing
4.2 years ago by selplat21 ▴ 20
0
votes
0
replies
1.0k
views
Comment: C: Making disjoint chromosomal sites contiguous with awk
4.2 years ago by selplat21 ▴ 20
0
votes
1
reply
1.0k
views
Comment: C: Making disjoint chromosomal sites contiguous with awk
4.2 years ago by selplat21 ▴ 20
0
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1
reply
1.0k
views
Comment: A: Making disjoint chromosomal sites contiguous with awk
4.2 years ago by selplat21 ▴ 20
0
votes
5
replies
1.0k
views
Making disjoint chromosomal sites contiguous with awk
awk assembly bash sequence
updated 20 months ago by 44k • written 4.2 years ago by ▴ 20
1
vote
9
replies
2.5k
views
Concatenation and Gzip Compression of Beagle Files Slow
sequencing next-gen unix bash
updated 4.4 years ago by 20 • written 4.4 years ago by ▴ 20
0
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1
reply
2.5k
views
Comment: C: Concatenation and Gzip Compression of Beagle Files Slow
4.4 years ago by selplat21 ▴ 20
0
votes
1
reply
2.5k
views
Comment: C: Concatenation and Gzip Compression of Beagle Files Slow
4.4 years ago by selplat21 ▴ 20
0
votes
1
reply
2.5k
views
Comment: C: Concatenation and Gzip Compression of Beagle Files Slow
4.4 years ago by selplat21 ▴ 20
1
vote
6
replies
1.3k
views
Print based on character strings
R Command Line Unix
4.4 years ago by selplat21 ▴ 20
0
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1
reply
1.3k
views
Comment: A: Print based on character strings
4.4 years ago by selplat21 ▴ 20
0
votes
1
reply
1.3k
views
Comment: C: Print based on character strings
4.4 years ago by selplat21 ▴ 20
75 results • Page 1 of 2
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