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Comment: Comment: GSEA and genes with 0 TPM's
8 months ago by Sandeep ▴ 260
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Answer: A: NGS pipelines @ free of cost
updated 4.3 years ago by 43k • written 8.3 years ago by ▴ 260
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9.3k
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Answer: A: Gallery: Computational tools for DNA methylation
updated 4.4 years ago by 43k • written 8.4 years ago by ▴ 260
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Answer: A: Survey: Your top 5 user-friendly bioinformatics learning and research tools and
updated 4.4 years ago by 43k • written 8.5 years ago by ▴ 260
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2
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5.1k
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Comment: C: Snps Location Annotations
updated 4.5 years ago by 43k • written 8.3 years ago by ▴ 260
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5.0k
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Comment: C: Align short reads to multiple reference sequence
updated 4.5 years ago by 43k • written 9.7 years ago by ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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1
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3.1k
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Comment: C: VarScan.v2.4.3 generating incomplete or partial VCF file
4.7 years ago by Sandeep ▴ 260
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18
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3.1k
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VarScan.v2.4.3 generating incomplete or partial VCF file
SNP variant calling exomeSeq varscan
updated 4.7 years ago by ▴ 310 • written 4.7 years ago by ▴ 260
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1
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1.4k
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Are there any tools that can extract somatic variants from matched normal tumor vcf files?
DNA-seq variant calling ngs
updated 4.7 years ago by 87k • written 4.8 years ago by ▴ 260
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2.1k
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Comment: C: Is it possible to extract somatic variants from paired VCF files?
4.8 years ago by Sandeep ▴ 260
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2.2k
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Comment: C: GTF file for Bombyx Mori
5.9 years ago by Sandeep ▴ 260
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1
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2.2k
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Comment: C: GTF file for Bombyx Mori
5.9 years ago by Sandeep ▴ 260
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2.2k
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Comment: C: GTF file for Bombyx Mori
5.9 years ago by Sandeep ▴ 260
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2.2k
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Comment: C: GTF file for Bombyx Mori
5.9 years ago by Sandeep ▴ 260
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2.2k
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Comment: C: GTF file for Bombyx Mori
5.9 years ago by Sandeep ▴ 260
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10
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2.2k
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GTF file for Bombyx Mori
miRNA small RNA bombyx mori smallrna seq
updated 5.9 years ago by ★ 3.2k • written 5.9 years ago by ▴ 260
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7
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3.2k
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CNV analysis for targeted genomic region
CNV
updated 10 months ago by 43k • written 8.1 years ago by ▴ 260
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1.5k
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Comment: C: how to find a micro RNA in a mature RNA?
7.9 years ago by Sandeep ▴ 260
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3.1k
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Answer: A: uploading files to the UCSC
7.9 years ago by Sandeep ▴ 260
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1
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2.4k
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Answer: A: Allele specific expression (ASE) using TPM (transcripts per million) values
7.9 years ago by Sandeep ▴ 260
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0
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5.0k
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Answer: A: How to get adapter information from SRA dump FASTQ file??
7.9 years ago by Sandeep ▴ 260
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16k
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Comment: C: Annotating bed file with gene names
8.0 years ago by Sandeep ▴ 260
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3.4k
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Answer: A: What kinds of custom GTF/GFF/FASTA files should Ensembl provide?
8.0 years ago by Sandeep ▴ 260
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1
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4.3k
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Answer: A: Align RNASeq reads to combined genomes
8.0 years ago by Sandeep ▴ 260
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2.0k
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Answer: A: Why cnvkit run with output error
8.0 years ago by Sandeep ▴ 260
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1.9k
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Comment: C: Building a large-memory system for assembly and NGS analysis
8.0 years ago by Sandeep ▴ 260
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3.2k
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Comment: C: CNV analysis for targeted genomic region
8.0 years ago by Sandeep ▴ 260
0
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1
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3.2k
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Comment: C: CNV analysis for targeted genomic region
8.1 years ago by Sandeep ▴ 260
0
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0
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3.2k
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Comment: C: CNV analysis for targeted genomic region
8.1 years ago by Sandeep ▴ 260
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0
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3.2k
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Comment: C: Whole genome coordinates of promoters/gene regulatory elements
8.3 years ago by Sandeep ▴ 260
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2.0k
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Answer: A: Ovarian cancer & Gene Expression
8.4 years ago by Sandeep ▴ 260
2
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10
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4.0k
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Align short reads to large multi reference genome
bowtie ebwtl
updated 17 months ago by 43k • written 8.7 years ago by ▴ 260
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0
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3.7k
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Comment: C: Best way to perform single-cell RNA-seq normalization
8.5 years ago by Sandeep ▴ 260
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1
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3.7k
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Comment: C: Best way to perform single-cell RNA-seq normalization
8.5 years ago by Sandeep ▴ 260
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2.9k
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Comment: C: Digital Expression Explorer
8.5 years ago by Sandeep ▴ 260
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5
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5.9k
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Which Tool Is Used To Plot The Ideogram Shown Here?
updated 8.5 years ago by 20 • written 10.9 years ago by ▴ 260
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3
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2.4k
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Comment: C: Why is the scaling factor always million while dealing with RNA-Seq expression?
8.6 years ago by Sandeep ▴ 260
3
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6
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2.4k
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Why is the scaling factor always million while dealing with RNA-Seq expression?
RPKM TPM FPKM RNA-Seq CPM
updated 19 months ago by 43k • written 8.6 years ago by ▴ 260
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0
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4.0k
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Comment: C: Align short reads to large multi reference genome
8.7 years ago by Sandeep ▴ 260
0
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0
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3.6k
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Comment: Comment: How to get Allele Coverage from bam file or vcf file?
updated 17 months ago by 43k • written 8.7 years ago by ▴ 260
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0
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4.0k
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Comment: C: Align short reads to large multi reference genome
8.7 years ago by Sandeep ▴ 260
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