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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
1 hour ago by Apex92 ▴ 260
0
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0
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272
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
4 days ago by Apex92 ▴ 260
0
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1
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272
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
4 days ago by Apex92 ▴ 260
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5
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272
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How to demultiplex single end - dual index run - NextSeq 500
sequencing bcl2fastq rna-seq
1 hour ago by Apex92 ▴ 260
0
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5
replies
365
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How to get human cDNA sequences together with UTR regions?
transcripts cDNA genome rna-seq
updated 12 days ago by 97k • written 12 days ago by ▴ 260
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1
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365
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Answer: Answer: How to get human cDNA sequences together with UTR regions?
12 days ago by Apex92 ▴ 260
2
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2
replies
313
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How to compare different illumina indices with each other to see how similar or different they are
alignment sequencing rna-seq
updated 7 weeks ago by 127k • written 7 weeks ago by ▴ 260
1
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0
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650
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Comment: Comment: Annotating ENS codes to gene name
7 weeks ago by Apex92 ▴ 260
1
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1
reply
650
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Answer: Answer: Annotating ENS codes to gene name
7 weeks ago by Apex92 ▴ 260
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0
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327
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Answer: Answer: transcriptomincs
8 weeks ago by Apex92 ▴ 260
1
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0
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355
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Comment: Comment: Gene id to Uniprot id
10 weeks ago by Apex92 ▴ 260
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1
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506
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Comment: Comment: Bowtie error when indexing a reference file
10 weeks ago by Apex92 ▴ 260
0
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1
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506
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Comment: Comment: Bowtie error when indexing a reference file
10 weeks ago by Apex92 ▴ 260
1
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6
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506
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Bowtie error when indexing a reference file
bowtie RNA-seq
updated 10 weeks ago by 70k • written 10 weeks ago by ▴ 260
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9
replies
796
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Differential gene expression analysis with no replicates using edgeR
edgeR RNA-seq DEG
updated 3 months ago by 38k • written 3 months ago by ▴ 260
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2
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796
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Comment: Comment: Differential gene expression analysis with no replicates using edgeR
3 months ago by Apex92 ▴ 260
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0
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414
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Comment: Comment: How to download the entire Run from Basespace illumina
3 months ago by Apex92 ▴ 260
4
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2
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414
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How to download the entire Run from Illumina BaseSpace
illumina sequencing RNA-seq
3 months ago by Apex92 ▴ 260
0
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0
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496
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Comment: Comment: How to open/work with wig or tdf files
4 months ago by Apex92 ▴ 260
2
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3
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496
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How to open/work with wig or tdf files
IGV sequencing wig rna-seq tdf
4 months ago by Apex92 ▴ 260
0
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1
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464
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Comment: Comment: The concept of differentially expressed genes at exon and intron level
6 months ago by Apex92 ▴ 260
2
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3
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464
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The concept of differentially expressed genes at exon and intron level
transcription DEG RNA-Seq sequencing genome
updated 6 months ago by 14k • written 6 months ago by ▴ 260
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0
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451
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Comment: Comment: How to choose one TSS for every gene using Gencode annotation file?
7 months ago by Apex92 ▴ 260
3
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3
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451
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How to choose one TSS for every gene using Gencode annotation file?
TSS transcription sequencing RNA-seq
7 months ago by Apex92 ▴ 260
0
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0
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359
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Comment: Comment: Cell cycle arrest analysis using bulk RNA-seq
7 months ago by Apex92 ▴ 260
1
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2
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359
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Cell cycle arrest analysis using bulk RNA-seq
rna-seq RNA-Seq sequencing cell-cycle genome
7 months ago by Apex92 ▴ 260
0
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0
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167
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How robust is rMATS when swapping samples?
splicing rmats RNA-seq STAR alternative
8 months ago by Apex92 ▴ 260
0
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0
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431
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Comment: Comment: Error when using edgeR with only two samples
9 months ago by Apex92 ▴ 260
4
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2
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431
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Error when using edgeR with only two samples
RNA-seq DGE sequencing edgeR
9 months ago by Apex92 ▴ 260
0
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1
reply
796
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Comment: Comment: edgeR glmRT code error message
9 months ago by Apex92 ▴ 260
0
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1
reply
488
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Comment: Comment: How to perform differential gene expression analysis with only one replicate in
9 months ago by Apex92 ▴ 260
2
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4
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488
views
How to perform differential gene expression analysis with only one replicate in each condition
RNA-seq DEG DESeq2 sequencing
updated 9 months ago by 52k • written 9 months ago by ▴ 260
1
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0
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483
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Answer: Answer: miRNA help
12 months ago by Apex92 ▴ 260
0
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0
replies
300
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How to edit a SAM file using pysam
sam pysam mapping algnment bam
12 months ago by Apex92 ▴ 260
0
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0
replies
614
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Comment: Comment: What could be a good balance between baseMean and Log2FoldChange?
12 months ago by Apex92 ▴ 260
0
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5
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614
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What could be a good balance between baseMean and Log2FoldChange?
expression gene statistics DESeq2 DEG
12 months ago by Apex92 ▴ 260
0
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1
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614
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Answer: Answer: What could be a good balance between baseMean and Log2FoldChange?
12 months ago by Apex92 ▴ 260
0
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0
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614
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Comment: Comment: What could be a good balance between baseMean and Log2FoldChange?
12 months ago by Apex92 ▴ 260
0
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0
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338
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Comment: Comment: What is a suitable Gene Ontology Enrichment Analaysis tool?
12 months ago by Apex92 ▴ 260
3
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2
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338
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What is a suitable Gene Ontology Enrichment Analaysis tool?
statistics Enrichment Ontology
12 months ago by Apex92 ▴ 260
0
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0
replies
306
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What is the latest and reliable Gene Ontology analysis tool in Python
sequencing ontology genome enrichr RNA-Seq
12 months ago by Apex92 ▴ 260
0
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2
replies
1.3k
views
Comment: Comment: NextSeq 2000 bcl2fastq conversion
12 months ago by Apex92 ▴ 260
0
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4
replies
1.3k
views
NextSeq 2000 bcl2fastq conversion
sequencing bcl2fastq fastq
updated 12 months ago by 127k • written 12 months ago by ▴ 260
0
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1
reply
768
views
bcl2fastq error with RunInfo.xml
sequencing bcl2fastq fastq
updated 12 months ago by 13k • written 12 months ago by ▴ 260
0
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2
replies
611
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Comment: Comment: How to get rid of mis-assigned reads without having bcl files or index informati
13 months ago by Apex92 ▴ 260
2
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4
replies
611
views
How to get rid of mis-assigned reads without having bcl files or index information?
alignment fastq RNA-seq
updated 13 months ago by 13k • written 13 months ago by ▴ 260
4
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1
reply
1.0k
views
Answer: Answer: help in my miRNA analysis
13 months ago by Apex92 ▴ 260
1
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0
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361
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Comment: Comment: Low number of differentially expressed genes in scRNAseq
13 months ago by Apex92 ▴ 260
1
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0
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971
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Comment: Comment: Analyzing and slicing FASTQ file entries using Python
13 months ago by Apex92 ▴ 260
1
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1
reply
971
views
Comment: Comment: Analyzing and slicing FASTQ file entries using Python
13 months ago by Apex92 ▴ 260
153 results • Page 1 of 4
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