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How to identify the phylogenetic node age of RNAs?
phylogeny genome evolution RNA-seq
18 months ago by Apex92 ▴ 320
0
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1
reply
574
views
How to perform enrichment p-value for a motif
Enrichment statistics
updated 18 months ago by ★ 1.9k • written 18 months ago by ▴ 320
0
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0
replies
507
views
How to calculate the percentage of hydrophobic amino acids?
genome RNA-Seq Splicing sequencing
18 months ago by Apex92 ▴ 320
0
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0
replies
20k
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Comment: Comment: Converting gtf format to bed format
21 months ago by Apex92 ▴ 320
0
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12
replies
4.6k
views
Differential gene expression analysis with no replicates using edgeR
edgeR RNA-seq DEG
updated 21 months ago by ▴ 90 • written 2.8 years ago by ▴ 320
0
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1
reply
1.1k
views
How to interpret the negative Log2FC from DESeq2 output?
DESeq2 statistics gene-expression DEG
updated 23 months ago by 45k • written 23 months ago by ▴ 320
0
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0
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965
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Comment: Comment: How to run quantifier from miRDeep2 (miRNA seqs from MirGeneDB)
2.0 years ago by Apex92 ▴ 320
0
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0
replies
6.3k
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Comment: Comment: Problem in indexing toplevel genome with HISAT2
2.0 years ago by Apex92 ▴ 320
0
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1
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3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
views
Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
views
Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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0
replies
3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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1
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3.5k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
2.1 years ago by Apex92 ▴ 320
0
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18
replies
3.5k
views
bcl2fastq conversion with specifying exact match of indices
genome RNA-Seq sequencing
updated 2.1 years ago by 153k • written 2.1 years ago by ▴ 320
0
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0
replies
770
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Comment: Comment: Is chi-square test suitable for my categorical data?
2.1 years ago by Apex92 ▴ 320
0
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2
replies
770
views
Is chi-square test suitable for my categorical data?
statistics r
2.1 years ago by Apex92 ▴ 320
0
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0
replies
956
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Comment: Comment: Testing Gene Set Overlap with Binomial Distribution
2.1 years ago by Apex92 ▴ 320
0
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2
replies
956
views
Testing Gene Set Overlap with Binomial Distribution or Hypergeometric Distribution
statistics Enrichment
2.1 years ago by Apex92 ▴ 320
0
votes
1
reply
965
views
How to run quantifier from miRDeep2 (miRNA seqs from MirGeneDB)
quantifier alignment mapping mirdeep2
2.0 years ago by Apex92 ▴ 320
0
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0
replies
733
views
Finding ORF via UCSC genome browser
genome RNA-Seq sequencing
2.3 years ago by Apex92 ▴ 320
0
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1
reply
1.4k
views
Comment: Comment: gene enrichmnet analysis
2.3 years ago by Apex92 ▴ 320
0
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1
reply
1.4k
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Answer: Answer: gene enrichmnet analysis
2.3 years ago by Apex92 ▴ 320
0
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0
replies
1.1k
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Comment: Comment: Confirming intron length
2.3 years ago by Apex92 ▴ 320
0
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2
replies
1.1k
views
Confirming intron length
genome RNA-Seq sequencing
2.3 years ago by Apex92 ▴ 320
0
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0
replies
895
views
How the "IJC" is calculated in rMATS tool?
Sashimi sequencing alignment rMATS rna-seq
2.3 years ago by Apex92 ▴ 320
1
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2
replies
1.1k
views
How to split a fastq file to multiples fastq files
fastq sequencing rna-seq
2.4 years ago by Apex92 ▴ 320
1
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0
replies
1.1k
views
Answer: Answer: How to split a fastq file to multiples fastq files
2.4 years ago by Apex92 ▴ 320
0
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0
replies
2.2k
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
2.5 years ago by Apex92 ▴ 320
0
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1
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2.2k
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
2.5 years ago by Apex92 ▴ 320
0
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0
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2.2k
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
2.5 years ago by Apex92 ▴ 320
0
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1
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2.2k
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
2.5 years ago by Apex92 ▴ 320
4
votes
7
replies
2.2k
views
How to demultiplex single-end dual indexed run - NextSeq 500
sequencing bcl2fastq rna-seq
2.5 years ago by Apex92 ▴ 320
0
votes
5
replies
1.9k
views
How to get human cDNA sequences together with UTR regions?
transcripts cDNA genome rna-seq
updated 2.5 years ago by 103k • written 2.5 years ago by ▴ 320
0
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1
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1.9k
views
Answer: Answer: How to get human cDNA sequences together with UTR regions?
2.5 years ago by Apex92 ▴ 320
2
votes
2
replies
1.3k
views
How to compare different illumina indices with each other to see how similar or different they are
alignment sequencing rna-seq
updated 2.6 years ago by 153k • written 2.6 years ago by ▴ 320
1
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0
replies
2.0k
views
Comment: Comment: Annotating ENS codes to gene name
2.6 years ago by Apex92 ▴ 320
1
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1
reply
2.0k
views
Answer: Answer: Annotating ENS codes to gene name
2.6 years ago by Apex92 ▴ 320
0
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0
replies
1.1k
views
Answer: Answer: transcriptomincs
2.6 years ago by Apex92 ▴ 320
1
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0
replies
1.2k
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Comment: Comment: Gene id to Uniprot id
2.7 years ago by Apex92 ▴ 320
0
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1
reply
1.8k
views
Comment: Comment: Bowtie error when indexing a reference file
2.7 years ago by Apex92 ▴ 320
0
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1
reply
1.8k
views
Comment: Comment: Bowtie error when indexing a reference file
2.7 years ago by Apex92 ▴ 320
1
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6
replies
1.8k
views
Bowtie error when indexing a reference file
bowtie RNA-seq
updated 2.7 years ago by 89k • written 2.7 years ago by ▴ 320
0
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2
replies
4.6k
views
Comment: Comment: Differential gene expression analysis with no replicates using edgeR
2.8 years ago by Apex92 ▴ 320
0
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0
replies
3.2k
views
Comment: Comment: How to download the entire Run from Basespace illumina
2.8 years ago by Apex92 ▴ 320
6
votes
2
replies
3.2k
views
How to download the entire Run from Illumina BaseSpace
illumina sequencing RNA-seq
2.8 years ago by Apex92 ▴ 320
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