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199
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How to identify the phylogenetic node age of RNAs?
phylogeny genome evolution RNA-seq
9 weeks ago by Apex92 ▴ 280
0
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1
reply
200
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How to perform enrichment p-value for a motif
Enrichment statistics
updated 11 weeks ago by ★ 1.8k • written 11 weeks ago by ▴ 280
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0
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167
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How to calculate the percentage of hydrophobic amino acids?
genome RNA-Seq Splicing sequencing
3 months ago by Apex92 ▴ 280
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0
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19k
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Comment: Comment: Converting gtf format to bed format
5 months ago by Apex92 ▴ 280
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12
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2.6k
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Differential gene expression analysis with no replicates using edgeR
edgeR RNA-seq DEG
updated 5 months ago by ▴ 90 • written 18 months ago by ▴ 280
0
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1
reply
487
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How to interpret the negative Log2FC from DESeq2 output?
DESeq2 statistics gene-expression DEG
updated 7 months ago by 44k • written 7 months ago by ▴ 280
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0
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465
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Comment: Comment: How to run quantifier from miRDeep2 (miRNA seqs from MirGeneDB)
8 months ago by Apex92 ▴ 280
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0
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4.7k
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Comment: Comment: Problem in indexing toplevel genome with HISAT2
9 months ago by Apex92 ▴ 280
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1
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1.9k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
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1
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1.9k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
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1
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1.9k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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1
reply
1.9k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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1
reply
1.9k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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1
reply
1.9k
views
Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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1
reply
1.9k
views
Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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0
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1.9k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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1
reply
1.9k
views
Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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1
reply
1.9k
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Comment: Comment: bcl2fastq conversion with specifying exact match of indices
9 months ago by Apex92 ▴ 280
0
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18
replies
1.9k
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bcl2fastq conversion with specifying exact match of indices
genome RNA-Seq sequencing
updated 9 months ago by 142k • written 9 months ago by ▴ 280
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0
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428
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Comment: Comment: Is chi-square test suitable for my categorical data?
9 months ago by Apex92 ▴ 280
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2
replies
428
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Is chi-square test suitable for my categorical data?
statistics r
9 months ago by Apex92 ▴ 280
0
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0
replies
502
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Comment: Comment: Testing Gene Set Overlap with Binomial Distribution
9 months ago by Apex92 ▴ 280
0
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2
replies
502
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Testing Gene Set Overlap with Binomial Distribution or Hypergeometric Distribution
statistics Enrichment
9 months ago by Apex92 ▴ 280
0
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1
reply
465
views
How to run quantifier from miRDeep2 (miRNA seqs from MirGeneDB)
quantifier alignment mapping mirdeep2
8 months ago by Apex92 ▴ 280
0
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0
replies
421
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Finding ORF via UCSC genome browser
genome RNA-Seq sequencing
11 months ago by Apex92 ▴ 280
0
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1
reply
863
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Comment: Comment: gene enrichmnet analysis
11 months ago by Apex92 ▴ 280
0
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1
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863
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Answer: Answer: gene enrichmnet analysis
11 months ago by Apex92 ▴ 280
0
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0
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613
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Comment: Comment: Confirming intron length
11 months ago by Apex92 ▴ 280
0
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2
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613
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Confirming intron length
genome RNA-Seq sequencing
11 months ago by Apex92 ▴ 280
0
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0
replies
486
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How the "IJC" is calculated in rMATS tool?
Sashimi sequencing alignment rMATS rna-seq
12 months ago by Apex92 ▴ 280
1
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2
replies
646
views
How to split a fastq file to multiples fastq files
fastq sequencing rna-seq
13 months ago by Apex92 ▴ 280
1
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0
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646
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Answer: Answer: How to split a fastq file to multiples fastq files
13 months ago by Apex92 ▴ 280
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0
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1.2k
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
14 months ago by Apex92 ▴ 280
0
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1
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1.2k
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
14 months ago by Apex92 ▴ 280
0
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0
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1.2k
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Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
14 months ago by Apex92 ▴ 280
0
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1
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1.2k
views
Comment: Comment: How to demultiplex single end - dual index run - NextSeq 500
14 months ago by Apex92 ▴ 280
4
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7
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1.2k
views
How to demultiplex single-end dual indexed run - NextSeq 500
sequencing bcl2fastq rna-seq
14 months ago by Apex92 ▴ 280
0
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5
replies
998
views
How to get human cDNA sequences together with UTR regions?
transcripts cDNA genome rna-seq
updated 14 months ago by 100k • written 14 months ago by ▴ 280
0
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1
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998
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Answer: Answer: How to get human cDNA sequences together with UTR regions?
14 months ago by Apex92 ▴ 280
2
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2
replies
654
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How to compare different illumina indices with each other to see how similar or different they are
alignment sequencing rna-seq
updated 15 months ago by 142k • written 15 months ago by ▴ 280
1
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0
replies
1.3k
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Comment: Comment: Annotating ENS codes to gene name
15 months ago by Apex92 ▴ 280
1
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1
reply
1.3k
views
Answer: Answer: Annotating ENS codes to gene name
15 months ago by Apex92 ▴ 280
0
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0
replies
666
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Answer: Answer: transcriptomincs
16 months ago by Apex92 ▴ 280
1
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0
replies
615
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Comment: Comment: Gene id to Uniprot id
16 months ago by Apex92 ▴ 280
0
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1
reply
1.2k
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Comment: Comment: Bowtie error when indexing a reference file
16 months ago by Apex92 ▴ 280
0
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1
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1.2k
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Comment: Comment: Bowtie error when indexing a reference file
16 months ago by Apex92 ▴ 280
1
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6
replies
1.2k
views
Bowtie error when indexing a reference file
bowtie RNA-seq
updated 16 months ago by 82k • written 16 months ago by ▴ 280
0
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2
replies
2.6k
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Comment: Comment: Differential gene expression analysis with no replicates using edgeR
18 months ago by Apex92 ▴ 280
0
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0
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1.7k
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Comment: Comment: How to download the entire Run from Basespace illumina
18 months ago by Apex92 ▴ 280
4
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2
replies
1.7k
views
How to download the entire Run from Illumina BaseSpace
illumina sequencing RNA-seq
18 months ago by Apex92 ▴ 280
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